RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
UBBP4-202ENST00000584755 PIP4K2BP78356 416 aa18.17■□□□□ 0.5
UBBP4-202ENST00000584755 DCTN1Q14203 1278 aa18.17■□□□□ 0.5
UBBP4-202ENST00000584755 AMOTQ4VCS5 1084 aa18.17■□□□□ 0.5
UBBP4-202ENST00000584755 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
UBBP4-202ENST00000584755 GNAT3A8MTJ3 354 aa18.16■□□□□ 0.5
UBBP4-202ENST00000584755 PLEKHO1Q53GL0 409 aaPredicted RBP18.16■□□□□ 0.5
UBBP4-202ENST00000584755 NLRP2Q9NX02 1062 aa18.16■□□□□ 0.5
UBBP4-202ENST00000584755 CSB-PGBD3P0DP91 1061 aa18.14■□□□□ 0.5
UBBP4-202ENST00000584755 MCM10Q7L590 875 aa18.14■□□□□ 0.5
UBBP4-202ENST00000584755 RTF1Q92541 710 aaKnown RBP18.14■□□□□ 0.5
UBBP4-202ENST00000584755 CHL1O00533 1208 aa18.14■□□□□ 0.49
UBBP4-202ENST00000584755 EXOSC9Q06265 439 aaKnown RBP18.14■□□□□ 0.49
UBBP4-202ENST00000584755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.49
UBBP4-202ENST00000584755 MEGF6O75095 1541 aa18.13■□□□□ 0.49
UBBP4-202ENST00000584755 CEMIPQ8WUJ3 1361 aa18.13■□□□□ 0.49
UBBP4-202ENST00000584755 MBIPQ9NS73 344 aa18.13■□□□□ 0.49
UBBP4-202ENST00000584755 PKD1L3Q7Z443 1732 aa18.13■□□□□ 0.49
UBBP4-202ENST00000584755 OVOS2A0A0G2JMS6 1433 aa18.12■□□□□ 0.49
UBBP4-202ENST00000584755 ADAMTS7Q9UKP4 1686 aa18.12■□□□□ 0.49
UBBP4-202ENST00000584755 RARSP54136 660 aaKnown RBP18.12■□□□□ 0.49
UBBP4-202ENST00000584755 AKAP4Q5JQC9 854 aa18.12■□□□□ 0.49
UBBP4-202ENST00000584755 IL17REQ8NFR9 667 aa18.12■□□□□ 0.49
UBBP4-202ENST00000584755 RAPGEF4Q8WZA2 1011 aa18.12■□□□□ 0.49
UBBP4-202ENST00000584755 CARD10Q9BWT7 1032 aa18.12■□□□□ 0.49
UBBP4-202ENST00000584755 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
UBBP4-202ENST00000584755 TATP17735 454 aaPredicted RBP18.1■□□□□ 0.49
UBBP4-202ENST00000584755 ZNF530Q6P9A1 599 aaPredicted RBP18.1■□□□□ 0.49
UBBP4-202ENST00000584755 BABAM1Q9NWV8 329 aa18.1■□□□□ 0.49
UBBP4-202ENST00000584755 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
UBBP4-202ENST00000584755 PARP4Q9UKK3 1724 aaKnown RBP18.09■□□□□ 0.49
UBBP4-202ENST00000584755 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
UBBP4-202ENST00000584755 BCAR3O75815 825 aa18.08■□□□□ 0.49
UBBP4-202ENST00000584755 TOM1L2Q6ZVM7 507 aa18.08■□□□□ 0.49
UBBP4-202ENST00000584755 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.08■□□□□ 0.49
UBBP4-202ENST00000584755 PLCH1Q4KWH8 1693 aa18.08■□□□□ 0.49
UBBP4-202ENST00000584755 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
UBBP4-202ENST00000584755 BTG4Q9NY30 223 aa18.07■□□□□ 0.48
UBBP4-202ENST00000584755 JCADQ9P266 1359 aa18.07■□□□□ 0.48
UBBP4-202ENST00000584755 SPG7Q9UQ90 795 aa18.07■□□□□ 0.48
UBBP4-202ENST00000584755 NRAPQ86VF7 1730 aa18.06■□□□□ 0.48
UBBP4-202ENST00000584755 PLIN1O60240 522 aa18.06■□□□□ 0.48
UBBP4-202ENST00000584755 VAMP4O75379 141 aa18.06■□□□□ 0.48
UBBP4-202ENST00000584755 EVA1CP58658 441 aa18.06■□□□□ 0.48
UBBP4-202ENST00000584755 C1orf141Q5JVX7 400 aa18.06■□□□□ 0.48
UBBP4-202ENST00000584755 VIRMAQ69YN4 1812 aaKnown RBP18.06■□□□□ 0.48
UBBP4-202ENST00000584755 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
UBBP4-202ENST00000584755 ALDH1L2Q3SY69 923 aa18.05■□□□□ 0.48
UBBP4-202ENST00000584755 NWD2Q9ULI1 1742 aa18.04■□□□□ 0.48
UBBP4-202ENST00000584755 RNMTO43148 476 aaKnown RBP18.04■□□□□ 0.48
UBBP4-202ENST00000584755 BRPF1P55201 1214 aaPredicted RBP18.04■□□□□ 0.48
UBBP4-202ENST00000584755 LGR6Q9HBX8 967 aa18.04■□□□□ 0.48
UBBP4-202ENST00000584755 STRN4Q9NRL3 753 aa18.04■□□□□ 0.48
UBBP4-202ENST00000584755 SIPA1L3O60292 1781 aaPredicted RBP18.04■□□□□ 0.48
UBBP4-202ENST00000584755 PHKG2P15735 406 aa18.03■□□□□ 0.48
UBBP4-202ENST00000584755 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
UBBP4-202ENST00000584755 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
UBBP4-202ENST00000584755 SSH1Q8WYL5 1049 aa18.03■□□□□ 0.48
UBBP4-202ENST00000584755 TSPYL4Q9UJ04 414 aa18.03■□□□□ 0.48
UBBP4-202ENST00000584755 SLIT2O94813 1529 aa18.03■□□□□ 0.48
UBBP4-202ENST00000584755 KDM3BQ7LBC6 1761 aa18.03■□□□□ 0.48
UBBP4-202ENST00000584755 SCN11AQ9UI33 1791 aa18.03■□□□□ 0.48
UBBP4-202ENST00000584755 IL2RBP14784 551 aa18.02■□□□□ 0.48
UBBP4-202ENST00000584755 TWISTNBQ3B726 338 aaPredicted RBP18.02■□□□□ 0.48
UBBP4-202ENST00000584755 IFNL2Q8IZJ0 200 aa18.02■□□□□ 0.48
UBBP4-202ENST00000584755 DISP2A7MBM2 1401 aa18.02■□□□□ 0.48
UBBP4-202ENST00000584755 PDE3AQ14432 1141 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 KDM6AO15550 1401 aaPredicted RBP18.01■□□□□ 0.47
UBBP4-202ENST00000584755 SHANK3Q9BYB0 1731 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 MRC1P22897 1456 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 CYP27B1O15528 508 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 ADAMTS2O95450 1211 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 C20orf194Q5TEA3 1177 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 MIS18AQ9NYP9 233 aa18.01■□□□□ 0.47
UBBP4-202ENST00000584755 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
UBBP4-202ENST00000584755 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
UBBP4-202ENST00000584755 SMC4Q9NTJ3 1288 aa18■□□□□ 0.47
UBBP4-202ENST00000584755 WNK3Q9BYP7 1800 aa17.99■□□□□ 0.47
UBBP4-202ENST00000584755 HSP90AB1P08238 724 aaKnown RBP17.99■□□□□ 0.47
UBBP4-202ENST00000584755 BCL2L13Q9BXK5 485 aa17.99■□□□□ 0.47
UBBP4-202ENST00000584755 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
UBBP4-202ENST00000584755 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
UBBP4-202ENST00000584755 NUTM2BA6NNL0 878 aaPredicted RBP17.98■□□□□ 0.47
UBBP4-202ENST00000584755 NUTM2EB1AL46 878 aaPredicted RBP17.98■□□□□ 0.47
UBBP4-202ENST00000584755 TEFQ10587 303 aa17.98■□□□□ 0.47
UBBP4-202ENST00000584755 NUTM2AQ8IVF1 878 aaPredicted RBP17.98■□□□□ 0.47
UBBP4-202ENST00000584755 EXOC6Q8TAG9 804 aa17.98■□□□□ 0.47
UBBP4-202ENST00000584755 DCAF5Q96JK2 942 aa17.98■□□□□ 0.47
UBBP4-202ENST00000584755 KIF16BQ96L93 1317 aa17.97■□□□□ 0.47
UBBP4-202ENST00000584755 KRT24Q2M2I5 525 aa17.97■□□□□ 0.47
UBBP4-202ENST00000584755 MRPL50Q8N5N7 158 aaKnown RBP17.97■□□□□ 0.47
UBBP4-202ENST00000584755 CRBNQ96SW2 442 aa17.97■□□□□ 0.47
UBBP4-202ENST00000584755 NKX1-1Q15270 411 aaPredicted RBP17.96■□□□□ 0.47
UBBP4-202ENST00000584755 ELL2O00472 640 aaPredicted RBP17.95■□□□□ 0.46
UBBP4-202ENST00000584755 HSPA1LP34931 641 aa17.95■□□□□ 0.46
UBBP4-202ENST00000584755 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
UBBP4-202ENST00000584755 LRP6O75581 1613 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms