RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 NPHP4O75161 1426 aaPredicted RBP15.84■□□□□ 0.13
ITGB4-212ENST00000584558 RGPD1P0DJD0 1748 aa15.84■□□□□ 0.13
ITGB4-212ENST00000584558 GBP4Q96PP9 640 aa15.83■□□□□ 0.13
ITGB4-212ENST00000584558 PCDHB15Q9Y5E8 787 aa15.83■□□□□ 0.13
ITGB4-212ENST00000584558 NWD1Q149M9 1564 aa15.83■□□□□ 0.12
ITGB4-212ENST00000584558 ZNF335Q9H4Z2 1342 aaPredicted RBP15.83■□□□□ 0.12
ITGB4-212ENST00000584558 SMAP1Q8IYB5 467 aaPredicted RBP15.83■□□□□ 0.12
ITGB4-212ENST00000584558 IL16Q14005 1332 aa15.82■□□□□ 0.12
ITGB4-212ENST00000584558 PPP1R9BQ96SB3 815 aa15.82■□□□□ 0.12
ITGB4-212ENST00000584558 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
ITGB4-212ENST00000584558 TERF1P54274 439 aa15.81■□□□□ 0.12
ITGB4-212ENST00000584558 SKOR2Q2VWA4 1001 aaPredicted RBP15.81■□□□□ 0.12
ITGB4-212ENST00000584558 RARSP54136 660 aaKnown RBP15.8■□□□□ 0.12
ITGB4-212ENST00000584558 XPCQ01831 940 aaPredicted RBP15.8■□□□□ 0.12
ITGB4-212ENST00000584558 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
ITGB4-212ENST00000584558 ADGRL3Q9HAR2 1447 aa15.79■□□□□ 0.12
ITGB4-212ENST00000584558 PHACTR3Q96KR7 559 aa15.79■□□□□ 0.12
ITGB4-212ENST00000584558 DLG5Q8TDM6 1919 aa15.79■□□□□ 0.12
ITGB4-212ENST00000584558 STRCQ7RTU9 1775 aa15.79■□□□□ 0.12
ITGB4-212ENST00000584558 HSP90AB1P08238 724 aaKnown RBP15.78■□□□□ 0.12
ITGB4-212ENST00000584558 TNNQ9UQP3 1299 aa15.78■□□□□ 0.12
ITGB4-212ENST00000584558 HMOX1P09601 288 aa15.78■□□□□ 0.12
ITGB4-212ENST00000584558 NFE2L2Q16236 605 aa15.77■□□□□ 0.12
ITGB4-212ENST00000584558 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.12
ITGB4-212ENST00000584558 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.11
ITGB4-212ENST00000584558 RWDD1Q9H446 243 aaPredicted RBP15.77■□□□□ 0.11
ITGB4-212ENST00000584558 CT47B1P0C2W7 299 aaPredicted RBP15.76■□□□□ 0.11
ITGB4-212ENST00000584558 BCL2L13Q9BXK5 485 aa15.76■□□□□ 0.11
ITGB4-212ENST00000584558 RLBP1P12271 317 aa15.76■□□□□ 0.11
ITGB4-212ENST00000584558 C14orf37Q86TY3 774 aa15.76■□□□□ 0.11
ITGB4-212ENST00000584558 TSR2Q969E8 191 aaKnown RBP15.76■□□□□ 0.11
ITGB4-212ENST00000584558 DDIT3P35638 169 aa15.75■□□□□ 0.11
ITGB4-212ENST00000584558 RAB3GAP1Q15042 981 aa15.74■□□□□ 0.11
ITGB4-212ENST00000584558 MTERF4Q7Z6M4 381 aaKnown RBP15.74■□□□□ 0.11
ITGB4-212ENST00000584558 DDX49Q9Y6V7 483 aaKnown RBP15.74■□□□□ 0.11
ITGB4-212ENST00000584558 PROSER2Q86WR7 435 aaPredicted RBP15.74■□□□□ 0.11
ITGB4-212ENST00000584558 PDE4CQ08493 712 aa15.73■□□□□ 0.11
ITGB4-212ENST00000584558 MAP3K19Q56UN5 1328 aa15.73■□□□□ 0.11
ITGB4-212ENST00000584558 NCOA3Q9Y6Q9 1424 aa15.73■□□□□ 0.11
ITGB4-212ENST00000584558 PTMSP20962 102 aa15.73■□□□□ 0.11
ITGB4-212ENST00000584558 SBNO1A3KN83 1393 aa15.73■□□□□ 0.11
ITGB4-212ENST00000584558 EXOSC9Q06265 439 aaKnown RBP15.73■□□□□ 0.11
ITGB4-212ENST00000584558 HSP90AB2PQ58FF8 381 aa15.73■□□□□ 0.11
ITGB4-212ENST00000584558 GOLGA6L22H0YM25 854 aa15.72■□□□□ 0.11
ITGB4-212ENST00000584558 DYNC1I1O14576 645 aa15.72■□□□□ 0.11
ITGB4-212ENST00000584558 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
ITGB4-212ENST00000584558 CIZ1Q9ULV3 898 aaPredicted RBP15.72■□□□□ 0.11
ITGB4-212ENST00000584558 FLT4P35916 1363 aa15.71■□□□□ 0.11
ITGB4-212ENST00000584558 NCLP19338 710 aaKnown RBP15.71■□□□□ 0.11
ITGB4-212ENST00000584558 NOL7Q9UMY1 257 aaKnown RBP15.71■□□□□ 0.11
ITGB4-212ENST00000584558 PHF8Q9UPP1 1060 aa15.71■□□□□ 0.11
ITGB4-212ENST00000584558 ZBTB7CA1YPR0 619 aa15.7■□□□□ 0.1
ITGB4-212ENST00000584558 ZNF500O60304 480 aaPredicted RBP15.7■□□□□ 0.1
ITGB4-212ENST00000584558 DMTNQ08495 405 aa15.7■□□□□ 0.1
ITGB4-212ENST00000584558 AEBP1Q8IUX7 1158 aa15.7■□□□□ 0.1
ITGB4-212ENST00000584558 ARHGEF10O15013 1369 aa15.7■□□□□ 0.1
ITGB4-212ENST00000584558 ZNF853P0CG23 659 aa15.7■□□□□ 0.1
ITGB4-212ENST00000584558 SSFA2P28290 1259 aa15.7■□□□□ 0.1
ITGB4-212ENST00000584558 KIF24Q5T7B8 1368 aa15.7■□□□□ 0.1
ITGB4-212ENST00000584558 BBXQ8WY36 941 aaPredicted RBP15.69■□□□□ 0.1
ITGB4-212ENST00000584558 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.69■□□□□ 0.1
ITGB4-212ENST00000584558 STRCP1A6NGW2 1772 aa15.69■□□□□ 0.1
ITGB4-212ENST00000584558 SULT6B1Q6IMI4 303 aa15.68■□□□□ 0.1
ITGB4-212ENST00000584558 CCDC94Q9BW85 323 aaPredicted RBP15.68■□□□□ 0.1
ITGB4-212ENST00000584558 NFAT5O94916 1531 aa15.68■□□□□ 0.1
ITGB4-212ENST00000584558 KLHL40Q2TBA0 621 aa15.68■□□□□ 0.1
ITGB4-212ENST00000584558 DDX17Q92841 729 aaKnown RBP15.68■□□□□ 0.1
ITGB4-212ENST00000584558 SNX21Q969T3 373 aa15.68■□□□□ 0.1
ITGB4-212ENST00000584558 KDRP35968 1356 aa15.68■□□□□ 0.1
ITGB4-212ENST00000584558 NLRP6P59044 892 aa15.67■□□□□ 0.1
ITGB4-212ENST00000584558 HS1BP3Q53T59 392 aa15.67■□□□□ 0.1
ITGB4-212ENST00000584558 THUMPD2Q9BTF0 503 aaKnown RBP15.67■□□□□ 0.1
ITGB4-212ENST00000584558 IFT57Q9NWB7 429 aa15.67■□□□□ 0.1
ITGB4-212ENST00000584558 ZSCAN20P17040 1043 aaPredicted RBP15.67■□□□□ 0.1
ITGB4-212ENST00000584558 CSPP1Q1MSJ5 1256 aa15.67■□□□□ 0.1
ITGB4-212ENST00000584558 UTP14CQ5TAP6 766 aaKnown RBP15.67■□□□□ 0.1
ITGB4-212ENST00000584558 CAVIN1Q6NZI2 390 aaKnown RBP15.67■□□□□ 0.1
ITGB4-212ENST00000584558 SASS6Q6UVJ0 657 aa15.67■□□□□ 0.1
ITGB4-212ENST00000584558 TMEM94Q12767 1356 aa15.67■□□□□ 0.1
ITGB4-212ENST00000584558 LTN1O94822 1766 aa15.67■□□□□ 0.1
ITGB4-212ENST00000584558 SOX12O15370 315 aa15.66■□□□□ 0.1
ITGB4-212ENST00000584558 SSH1Q8WYL5 1049 aa15.66■□□□□ 0.1
ITGB4-212ENST00000584558 TRPM3Q9HCF6 1732 aaPredicted RBP15.66■□□□□ 0.1
ITGB4-212ENST00000584558 PHRF1Q9P1Y6 1649 aaKnown RBP15.66■□□□□ 0.1
ITGB4-212ENST00000584558 LMOD3Q0VAK6 560 aa15.66■□□□□ 0.1
ITGB4-212ENST00000584558 ZKSCAN5Q9Y2L8 839 aa15.66■□□□□ 0.1
ITGB4-212ENST00000584558 IGSF1Q8N6C5 1336 aa15.66■□□□□ 0.1
ITGB4-212ENST00000584558 CD2BP2O95400 341 aaKnown RBP15.65■□□□□ 0.1
ITGB4-212ENST00000584558 RBSNQ9H1K0 784 aa15.65■□□□□ 0.1
ITGB4-212ENST00000584558 RBM25P49756 843 aaKnown RBP15.65■□□□□ 0.1
ITGB4-212ENST00000584558 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
ITGB4-212ENST00000584558 IBTKQ9P2D0 1353 aaPredicted RBP15.64■□□□□ 0.09
ITGB4-212ENST00000584558 GNAI1P63096 354 aa15.64■□□□□ 0.09
ITGB4-212ENST00000584558 ORAI2Q96SN7 254 aa15.64■□□□□ 0.09
ITGB4-212ENST00000584558 KIF1AQ12756 1690 aa15.64■□□□□ 0.09
ITGB4-212ENST00000584558 BAG4O95429 457 aaKnown RBP15.64■□□□□ 0.09
ITGB4-212ENST00000584558 HOXC9P31274 260 aa15.64■□□□□ 0.09
ITGB4-212ENST00000584558 ALDH1L2Q3SY69 923 aa15.64■□□□□ 0.09
ITGB4-212ENST00000584558 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
ITGB4-212ENST00000584558 FTSJ3Q8IY81 847 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms