RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 GNL3LQ9NVN8 582 aaKnown RBP15.3■□□□□ 0.04
RNF43-208ENST00000584437 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
RNF43-208ENST00000584437 CTAGE5O15320 804 aa15.3■□□□□ 0.04
RNF43-208ENST00000584437 EZRP15311 586 aaKnown RBP15.3■□□□□ 0.04
RNF43-208ENST00000584437 TAX1BP1Q86VP1 789 aa15.3■□□□□ 0.04
RNF43-208ENST00000584437 MTMR7Q9Y216 660 aa15.3■□□□□ 0.04
RNF43-208ENST00000584437 CWC27Q6UX04 472 aaKnown RBP15.29■□□□□ 0.04
RNF43-208ENST00000584437 IMMTQ16891 758 aaKnown RBP15.29■□□□□ 0.04
RNF43-208ENST00000584437 AACSQ86V21 672 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 CEP131Q9UPN4 1083 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 FCHSD2O94868 740 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 KIF6Q6ZMV9 814 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 TMEM57Q8N5G2 664 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 TBC1D2Q9BYX2 928 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 ANKRD30BQ9BXX2 1392 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 SRGAP3O43295 1099 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 KIF5CO60282 957 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 IKQ13123 557 aaPredicted RBP15.29■□□□□ 0.04
RNF43-208ENST00000584437 SLC12A5Q9H2X9 1139 aa15.29■□□□□ 0.04
RNF43-208ENST00000584437 CASTP20810 708 aaKnown RBP15.28■□□□□ 0.04
RNF43-208ENST00000584437 TNPO1Q92973 898 aaKnown RBP15.28■□□□□ 0.04
RNF43-208ENST00000584437 PRIMPOLQ96LW4 560 aa15.28■□□□□ 0.04
RNF43-208ENST00000584437 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
RNF43-208ENST00000584437 MAP4K4O95819 1239 aaPredicted RBP15.28■□□□□ 0.04
RNF43-208ENST00000584437 EIF5P55010 431 aaKnown RBP15.28■□□□□ 0.04
RNF43-208ENST00000584437 SULT6B1Q6IMI4 303 aa15.28■□□□□ 0.04
RNF43-208ENST00000584437 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
RNF43-208ENST00000584437 TNNT1P13805 278 aa15.28■□□□□ 0.04
RNF43-208ENST00000584437 ZNF397Q8NF99 534 aaPredicted RBP15.28■□□□□ 0.04
RNF43-208ENST00000584437 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
RNF43-208ENST00000584437 JAKMIP3Q5VZ66 844 aa15.27■□□□□ 0.04
RNF43-208ENST00000584437 CLIP2Q9UDT6 1046 aa15.27■□□□□ 0.04
RNF43-208ENST00000584437 DHX29Q7Z478 1369 aaKnown RBP15.27■□□□□ 0.04
RNF43-208ENST00000584437 POTEB2H3BUK9 544 aa15.27■□□□□ 0.04
RNF43-208ENST00000584437 CASQ1P31415 396 aa15.27■□□□□ 0.04
RNF43-208ENST00000584437 CNNM1Q9NRU3 951 aa15.27■□□□□ 0.04
RNF43-208ENST00000584437 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
RNF43-208ENST00000584437 URI1O94763 535 aaPredicted RBP15.27■□□□□ 0.04
RNF43-208ENST00000584437 GSDMDP57764 484 aa15.27■□□□□ 0.04
RNF43-208ENST00000584437 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
RNF43-208ENST00000584437 PRDM10Q9NQV6 1147 aa15.27■□□□□ 0.04
RNF43-208ENST00000584437 SOGA3Q5TF21 947 aa15.26■□□□□ 0.03
RNF43-208ENST00000584437 CFTRP13569 1480 aa15.26■□□□□ 0.03
RNF43-208ENST00000584437 CAMK4Q16566 473 aa15.26■□□□□ 0.03
RNF43-208ENST00000584437 ALDH1L2Q3SY69 923 aa15.26■□□□□ 0.03
RNF43-208ENST00000584437 DDX19AQ9NUU7 478 aaKnown RBP15.26■□□□□ 0.03
RNF43-208ENST00000584437 ANKRD62A6NC57 917 aa15.26■□□□□ 0.03
RNF43-208ENST00000584437 RAB11FIP3O75154 756 aa15.26■□□□□ 0.03
RNF43-208ENST00000584437 MICALCLQ6ZW33 695 aa15.26■□□□□ 0.03
RNF43-208ENST00000584437 EHBP1L1Q8N3D4 1523 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 GLRX3O76003 335 aaKnown RBP15.25■□□□□ 0.03
RNF43-208ENST00000584437 SSFA2P28290 1259 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 CCDC83Q8IWF9 413 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 SIL1Q9H173 461 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 GPRASP1Q5JY77 1395 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
RNF43-208ENST00000584437 MX1P20591 662 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 ABCC11Q96J66 1382 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 TOP1P11387 765 aaKnown RBP15.25■□□□□ 0.03
RNF43-208ENST00000584437 KIF4BQ2VIQ3 1234 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 KIF1BPQ96EK5 621 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 SLC26A8Q96RN1 970 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 USP25Q9UHP3 1055 aa15.25■□□□□ 0.03
RNF43-208ENST00000584437 CAVIN2O95810 425 aa15.24■□□□□ 0.03
RNF43-208ENST00000584437 SPA17Q15506 151 aa15.24■□□□□ 0.03
RNF43-208ENST00000584437 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
RNF43-208ENST00000584437 UBE2Q2Q8WVN8 375 aa15.24■□□□□ 0.03
RNF43-208ENST00000584437 NFE2L2Q16236 605 aa15.24■□□□□ 0.03
RNF43-208ENST00000584437 NUP133Q8WUM0 1156 aa15.24■□□□□ 0.03
RNF43-208ENST00000584437 DDX11Q96FC9 970 aa15.24■□□□□ 0.03
RNF43-208ENST00000584437 GBP2P32456 591 aaPredicted RBP15.24■□□□□ 0.03
RNF43-208ENST00000584437 TMPOP42166 694 aaKnown RBP15.24■□□□□ 0.03
RNF43-208ENST00000584437 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
RNF43-208ENST00000584437 IL1RAPL2Q9NP60 686 aa15.24■□□□□ 0.03
RNF43-208ENST00000584437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
RNF43-208ENST00000584437 KLHL40Q2TBA0 621 aa15.24■□□□□ 0.03
RNF43-208ENST00000584437 FERMT3Q86UX7 667 aa15.23■□□□□ 0.03
RNF43-208ENST00000584437 DYDC1Q8WWB3 177 aa15.23■□□□□ 0.03
RNF43-208ENST00000584437 PRAM1Q96QH2 718 aa15.23■□□□□ 0.03
RNF43-208ENST00000584437 UBAC1Q9BSL1 405 aa15.23■□□□□ 0.03
RNF43-208ENST00000584437 GOLGA6L9A6NEM1 432 aa15.23■□□□□ 0.03
RNF43-208ENST00000584437 ABTB2Q8N961 1025 aa15.23■□□□□ 0.03
RNF43-208ENST00000584437 CLCN1P35523 988 aa15.23■□□□□ 0.03
RNF43-208ENST00000584437 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
RNF43-208ENST00000584437 BMS1Q14692 1282 aaKnown RBP15.23■□□□□ 0.03
RNF43-208ENST00000584437 PPP4R3BQ5MIZ7 849 aa15.22■□□□□ 0.03
RNF43-208ENST00000584437 NUTM2GQ5VZR2 741 aa15.22■□□□□ 0.03
RNF43-208ENST00000584437 ZHX3Q9H4I2 956 aa15.22■□□□□ 0.03
RNF43-208ENST00000584437 PAXBP1Q9Y5B6 917 aa15.22■□□□□ 0.03
RNF43-208ENST00000584437 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
RNF43-208ENST00000584437 ATAD2Q6PL18 1390 aa15.22■□□□□ 0.03
RNF43-208ENST00000584437 EFCAB5A4FU69 1503 aa15.22■□□□□ 0.03
RNF43-208ENST00000584437 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
RNF43-208ENST00000584437 LIMCH1Q9UPQ0 1083 aa15.22■□□□□ 0.03
RNF43-208ENST00000584437 ARHGAP5Q13017 1502 aa15.22■□□□□ 0.03
RNF43-208ENST00000584437 CEP126Q9P2H0 1117 aa15.22■□□□□ 0.03
RNF43-208ENST00000584437 C9orf84Q5VXU9 1444 aa15.21■□□□□ 0.03
RNF43-208ENST00000584437 C16orf45Q96MC5 204 aaPredicted RBP15.21■□□□□ 0.03
RNF43-208ENST00000584437 HMGB1P09429 215 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms