RNA–Protein interactions for RNA: ENST00000584179.1

LINC00473-204, long intergenic non-protein coding RNA 473, humanhuman

TSL 5 BASIC

Gene LINC00473, Length 1,717 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-204ENST00000584179 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
LINC00473-204ENST00000584179 MAP3K5Q99683 1374 aa16■□□□□ 0.15
LINC00473-204ENST00000584179 GNAT3A8MTJ3 354 aa15.99■□□□□ 0.15
LINC00473-204ENST00000584179 ZNF853P0CG23 659 aa15.99■□□□□ 0.15
LINC00473-204ENST00000584179 RAPGEF4Q8WZA2 1011 aa15.99■□□□□ 0.15
LINC00473-204ENST00000584179 CFAP44Q96MT7 982 aa15.99■□□□□ 0.15
LINC00473-204ENST00000584179 JCADQ9P266 1359 aa15.99■□□□□ 0.15
LINC00473-204ENST00000584179 LRRC37A3O60309 1634 aa15.99■□□□□ 0.15
LINC00473-204ENST00000584179 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
LINC00473-204ENST00000584179 CARD10Q9BWT7 1032 aa15.98■□□□□ 0.15
LINC00473-204ENST00000584179 PARP4Q9UKK3 1724 aaKnown RBP15.98■□□□□ 0.15
LINC00473-204ENST00000584179 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
LINC00473-204ENST00000584179 ERICH6BQ5W0A0 696 aa15.97■□□□□ 0.15
LINC00473-204ENST00000584179 OVOS2A0A0G2JMS6 1433 aa15.97■□□□□ 0.15
LINC00473-204ENST00000584179 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
LINC00473-204ENST00000584179 TATP17735 454 aaPredicted RBP15.97■□□□□ 0.15
LINC00473-204ENST00000584179 AKAP4Q5JQC9 854 aa15.97■□□□□ 0.15
LINC00473-204ENST00000584179 BABAM1Q9NWV8 329 aa15.97■□□□□ 0.15
LINC00473-204ENST00000584179 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.15
LINC00473-204ENST00000584179 CRB1P82279 1406 aa15.96■□□□□ 0.15
LINC00473-204ENST00000584179 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
LINC00473-204ENST00000584179 PLCH1Q4KWH8 1693 aa15.96■□□□□ 0.14
LINC00473-204ENST00000584179 EVA1CP58658 441 aa15.95■□□□□ 0.14
LINC00473-204ENST00000584179 TOM1L2Q6ZVM7 507 aa15.95■□□□□ 0.14
LINC00473-204ENST00000584179 CEMIPQ8WUJ3 1361 aa15.95■□□□□ 0.14
LINC00473-204ENST00000584179 ADAMTS7Q9UKP4 1686 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 CHL1O00533 1208 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 ZNF530Q6P9A1 599 aaPredicted RBP15.94■□□□□ 0.14
LINC00473-204ENST00000584179 ILDR2Q71H61 639 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 THUMPD2Q9BTF0 503 aaKnown RBP15.94■□□□□ 0.14
LINC00473-204ENST00000584179 BTG4Q9NY30 223 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 SPG7Q9UQ90 795 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 MEGF6O75095 1541 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 RRP1P56182 461 aaKnown RBP15.94■□□□□ 0.14
LINC00473-204ENST00000584179 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 C1orf141Q5JVX7 400 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 MCM10Q7L590 875 aa15.94■□□□□ 0.14
LINC00473-204ENST00000584179 TSR2Q969E8 191 aaKnown RBP15.94■□□□□ 0.14
LINC00473-204ENST00000584179 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.93■□□□□ 0.14
LINC00473-204ENST00000584179 MBIPQ9NS73 344 aa15.92■□□□□ 0.14
LINC00473-204ENST00000584179 NRAPQ86VF7 1730 aa15.92■□□□□ 0.14
LINC00473-204ENST00000584179 LARP1Q6PKG0 1096 aaKnown RBP15.91■□□□□ 0.14
LINC00473-204ENST00000584179 IL17REQ8NFR9 667 aa15.91■□□□□ 0.14
LINC00473-204ENST00000584179 SCN11AQ9UI33 1791 aa15.91■□□□□ 0.14
LINC00473-204ENST00000584179 EXOSC9Q06265 439 aaKnown RBP15.91■□□□□ 0.14
LINC00473-204ENST00000584179 FKBP8Q14318 412 aa15.91■□□□□ 0.14
LINC00473-204ENST00000584179 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
LINC00473-204ENST00000584179 LAS1LQ9Y4W2 734 aaKnown RBP15.91■□□□□ 0.14
LINC00473-204ENST00000584179 SLIT2O94813 1529 aa15.9■□□□□ 0.14
LINC00473-204ENST00000584179 IL2RBP14784 551 aa15.9■□□□□ 0.14
LINC00473-204ENST00000584179 RARSP54136 660 aaKnown RBP15.9■□□□□ 0.14
LINC00473-204ENST00000584179 HSP90AB1P08238 724 aaKnown RBP15.89■□□□□ 0.13
LINC00473-204ENST00000584179 TAF7Q15545 349 aaPredicted RBP15.89■□□□□ 0.13
LINC00473-204ENST00000584179 IFNL2Q8IZJ0 200 aa15.89■□□□□ 0.13
LINC00473-204ENST00000584179 SOS1Q07889 1333 aaPredicted RBP15.89■□□□□ 0.13
LINC00473-204ENST00000584179 SIPA1L3O60292 1781 aaPredicted RBP15.89■□□□□ 0.13
LINC00473-204ENST00000584179 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
LINC00473-204ENST00000584179 PHKG2P15735 406 aa15.88■□□□□ 0.13
LINC00473-204ENST00000584179 ALDH1L2Q3SY69 923 aa15.88■□□□□ 0.13
LINC00473-204ENST00000584179 WNK3Q9BYP7 1800 aa15.87■□□□□ 0.13
LINC00473-204ENST00000584179 RNMTO43148 476 aaKnown RBP15.87■□□□□ 0.13
LINC00473-204ENST00000584179 THRAP3Q9Y2W1 955 aaKnown RBP15.87■□□□□ 0.13
LINC00473-204ENST00000584179 PCDH11XQ9BZA7 1347 aa15.87■□□□□ 0.13
LINC00473-204ENST00000584179 PCDH11YQ9BZA8 1340 aa15.87■□□□□ 0.13
LINC00473-204ENST00000584179 CACNA1FO60840 1977 aa15.87■□□□□ 0.13
LINC00473-204ENST00000584179 KDM3BQ7LBC6 1761 aa15.86■□□□□ 0.13
LINC00473-204ENST00000584179 NUTM2BA6NNL0 878 aaPredicted RBP15.86■□□□□ 0.13
LINC00473-204ENST00000584179 NUTM2EB1AL46 878 aaPredicted RBP15.86■□□□□ 0.13
LINC00473-204ENST00000584179 BRPF1P55201 1214 aaPredicted RBP15.86■□□□□ 0.13
LINC00473-204ENST00000584179 TEFQ10587 303 aa15.86■□□□□ 0.13
LINC00473-204ENST00000584179 NUTM2AQ8IVF1 878 aaPredicted RBP15.86■□□□□ 0.13
LINC00473-204ENST00000584179 ZCRB1Q8TBF4 217 aaKnown RBP15.86■□□□□ 0.13
LINC00473-204ENST00000584179 DCAF5Q96JK2 942 aa15.86■□□□□ 0.13
LINC00473-204ENST00000584179 CDCA7Q9BWT1 371 aaPredicted RBP15.86■□□□□ 0.13
LINC00473-204ENST00000584179 TSPYL4Q9UJ04 414 aa15.86■□□□□ 0.13
LINC00473-204ENST00000584179 DISP2A7MBM2 1401 aa15.86■□□□□ 0.13
LINC00473-204ENST00000584179 VAMP4O75379 141 aa15.85■□□□□ 0.13
LINC00473-204ENST00000584179 SHANK3Q9BYB0 1731 aa15.85■□□□□ 0.13
LINC00473-204ENST00000584179 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.85■□□□□ 0.13
LINC00473-204ENST00000584179 CYP27B1O15528 508 aa15.85■□□□□ 0.13
LINC00473-204ENST00000584179 MPRIPQ6WCQ1 1025 aa15.85■□□□□ 0.13
LINC00473-204ENST00000584179 LGR6Q9HBX8 967 aa15.85■□□□□ 0.13
LINC00473-204ENST00000584179 MRC1P22897 1456 aa15.85■□□□□ 0.13
LINC00473-204ENST00000584179 BCAR3O75815 825 aa15.84■□□□□ 0.13
LINC00473-204ENST00000584179 TWISTNBQ3B726 338 aaPredicted RBP15.84■□□□□ 0.13
LINC00473-204ENST00000584179 KDM6AO15550 1401 aaPredicted RBP15.83■□□□□ 0.13
LINC00473-204ENST00000584179 PDE3AQ14432 1141 aa15.83■□□□□ 0.13
LINC00473-204ENST00000584179 NKX1-1Q15270 411 aaPredicted RBP15.83■□□□□ 0.13
LINC00473-204ENST00000584179 FNBP4Q8N3X1 1017 aaPredicted RBP15.83■□□□□ 0.13
LINC00473-204ENST00000584179 CHMP4AQ9BY43 222 aa15.83■□□□□ 0.13
LINC00473-204ENST00000584179 SPATA31A1Q5TZJ5 1347 aa15.83■□□□□ 0.12
LINC00473-204ENST00000584179 KIF16BQ96L93 1317 aa15.83■□□□□ 0.12
LINC00473-204ENST00000584179 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
LINC00473-204ENST00000584179 UNC5CLQ8IV45 518 aa15.82■□□□□ 0.12
LINC00473-204ENST00000584179 SSH1Q8WYL5 1049 aa15.82■□□□□ 0.12
LINC00473-204ENST00000584179 SMC4Q9NTJ3 1288 aa15.82■□□□□ 0.12
LINC00473-204ENST00000584179 SPATA31A5Q5VU36 1347 aa15.81■□□□□ 0.12
LINC00473-204ENST00000584179 SPATA31A7Q8IWB4 1347 aa15.81■□□□□ 0.12
LINC00473-204ENST00000584179 MS4A1P11836 297 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms