RNA–Protein interactions for RNA: ENST00000584142.5

TRIM16-225, Transcript of tripartite motif containing 16, human

TSL 4

Gene TRIM16, Length 565 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-225	ENST00000584142	EVA1C	P58658	441 aa		13.78	□□□□□ -0.2
TRIM16-225	ENST00000584142	PELP1	Q8IZL8	1130 aa	Known RBP	13.78	□□□□□ -0.2
TRIM16-225	ENST00000584142	CFAP44	Q96MT7	982 aa		13.78	□□□□□ -0.2
TRIM16-225	ENST00000584142	AXIN2	Q9Y2T1	843 aa		13.78	□□□□□ -0.2
TRIM16-225	ENST00000584142	COL16A1	Q07092	1604 aa	Predicted RBP	13.78	□□□□□ -0.2
TRIM16-225	ENST00000584142	RGPD5	Q99666	1765 aa		13.78	□□□□□ -0.2
TRIM16-225	ENST00000584142	IRX6	P78412	446 aa	Predicted RBP	13.77	□□□□□ -0.21
TRIM16-225	ENST00000584142	COL14A1	Q05707	1796 aa	Known RBP	13.77	□□□□□ -0.21
TRIM16-225	ENST00000584142	WDR17	Q8IZU2	1322 aa		13.77	□□□□□ -0.21
TRIM16-225	ENST00000584142	TSR2	Q969E8	191 aa	Known RBP	13.77	□□□□□ -0.21
TRIM16-225	ENST00000584142	ZNF428	Q96B54	188 aa		13.77	□□□□□ -0.21
TRIM16-225	ENST00000584142	SPG7	Q9UQ90	795 aa		13.77	□□□□□ -0.21
TRIM16-225	ENST00000584142	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.76	□□□□□ -0.21
TRIM16-225	ENST00000584142	TOM1L2	Q6ZVM7	507 aa		13.76	□□□□□ -0.21
TRIM16-225	ENST00000584142	CERK	Q8TCT0	537 aa		13.76	□□□□□ -0.21
TRIM16-225	ENST00000584142	RGPD2	P0DJD1	1756 aa		13.76	□□□□□ -0.21
TRIM16-225	ENST00000584142	COL5A2	P05997	1499 aa	Predicted RBP	13.75	□□□□□ -0.21
TRIM16-225	ENST00000584142	FAM83G	A6ND36	823 aa		13.75	□□□□□ -0.21
TRIM16-225	ENST00000584142	EXOSC9	Q06265	439 aa	Known RBP	13.75	□□□□□ -0.21
TRIM16-225	ENST00000584142	AKAP4	Q5JQC9	854 aa		13.75	□□□□□ -0.21
TRIM16-225	ENST00000584142	MCM10	Q7L590	875 aa		13.75	□□□□□ -0.21
TRIM16-225	ENST00000584142	THUMPD2	Q9BTF0	503 aa	Known RBP	13.75	□□□□□ -0.21
TRIM16-225	ENST00000584142	OVOS2	A0A0G2JMS6	1433 aa		13.74	□□□□□ -0.21
TRIM16-225	ENST00000584142	PARP4	Q9UKK3	1724 aa	Known RBP	13.74	□□□□□ -0.21
TRIM16-225	ENST00000584142	MS4A1	P11836	297 aa		13.74	□□□□□ -0.21
TRIM16-225	ENST00000584142	LRRC37A3	O60309	1634 aa		13.74	□□□□□ -0.21
TRIM16-225	ENST00000584142	DCTN1	Q14203	1278 aa		13.73	□□□□□ -0.21
TRIM16-225	ENST00000584142	STRN4	Q9NRL3	753 aa		13.73	□□□□□ -0.21
TRIM16-225	ENST00000584142	MBIP	Q9NS73	344 aa		13.73	□□□□□ -0.21
TRIM16-225	ENST00000584142	BABAM1	Q9NWV8	329 aa		13.73	□□□□□ -0.21
TRIM16-225	ENST00000584142	PPP4R2	Q9NY27	417 aa		13.73	□□□□□ -0.21
TRIM16-225	ENST00000584142	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
TRIM16-225	ENST00000584142	TSPYL4	Q9UJ04	414 aa		13.73	□□□□□ -0.21
TRIM16-225	ENST00000584142	KIF16B	Q96L93	1317 aa		13.72	□□□□□ -0.21
TRIM16-225	ENST00000584142	HSP90AB1	P08238	724 aa	Known RBP	13.72	□□□□□ -0.21
TRIM16-225	ENST00000584142	ZNF853	P0CG23	659 aa		13.72	□□□□□ -0.21
TRIM16-225	ENST00000584142	TEF	Q10587	303 aa		13.72	□□□□□ -0.21
TRIM16-225	ENST00000584142	SMC4	Q9NTJ3	1288 aa		13.72	□□□□□ -0.21
TRIM16-225	ENST00000584142	RARS	P54136	660 aa	Known RBP	13.71	□□□□□ -0.21
TRIM16-225	ENST00000584142	ALDH1L2	Q3SY69	923 aa		13.71	□□□□□ -0.21
TRIM16-225	ENST00000584142	CARD10	Q9BWT7	1032 aa		13.71	□□□□□ -0.21
TRIM16-225	ENST00000584142	CHMP4A	Q9BY43	222 aa		13.71	□□□□□ -0.21
TRIM16-225	ENST00000584142	CRB1	P82279	1406 aa		13.71	□□□□□ -0.22
TRIM16-225	ENST00000584142	JCAD	Q9P266	1359 aa		13.71	□□□□□ -0.22
TRIM16-225	ENST00000584142	CHL1	O00533	1208 aa		13.7	□□□□□ -0.22
TRIM16-225	ENST00000584142	IPO8	O15397	1037 aa	Known RBP	13.7	□□□□□ -0.22
TRIM16-225	ENST00000584142	TWISTNB	Q3B726	338 aa	Predicted RBP	13.7	□□□□□ -0.22
TRIM16-225	ENST00000584142	FRAT1	Q92837	279 aa	Predicted RBP	13.7	□□□□□ -0.22
TRIM16-225	ENST00000584142	BTG4	Q9NY30	223 aa		13.7	□□□□□ -0.22
TRIM16-225	ENST00000584142	SOS1	Q07889	1333 aa	Predicted RBP	13.69	□□□□□ -0.22
TRIM16-225	ENST00000584142	IL2RB	P14784	551 aa		13.69	□□□□□ -0.22
TRIM16-225	ENST00000584142	TAF7	Q15545	349 aa	Predicted RBP	13.69	□□□□□ -0.22
TRIM16-225	ENST00000584142	IFNL2	Q8IZJ0	200 aa		13.69	□□□□□ -0.22
TRIM16-225	ENST00000584142	MEGF6	O75095	1541 aa		13.69	□□□□□ -0.22
TRIM16-225	ENST00000584142	PCDH11X	Q9BZA7	1347 aa		13.68	□□□□□ -0.22
TRIM16-225	ENST00000584142	PCDH11Y	Q9BZA8	1340 aa		13.68	□□□□□ -0.22
TRIM16-225	ENST00000584142	PKD1L3	Q7Z443	1732 aa		13.68	□□□□□ -0.22
TRIM16-225	ENST00000584142	BCAR3	O75815	825 aa		13.68	□□□□□ -0.22
TRIM16-225	ENST00000584142	PDE3A	Q14432	1141 aa		13.68	□□□□□ -0.22
TRIM16-225	ENST00000584142	ZKSCAN2	Q63HK3	967 aa		13.68	□□□□□ -0.22
TRIM16-225	ENST00000584142	CEMIP	Q8WUJ3	1361 aa		13.68	□□□□□ -0.22
TRIM16-225	ENST00000584142	PLCH1	Q4KWH8	1693 aa		13.67	□□□□□ -0.22
TRIM16-225	ENST00000584142	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.67	□□□□□ -0.22
TRIM16-225	ENST00000584142	NUTM2E	B1AL46	878 aa	Predicted RBP	13.67	□□□□□ -0.22
TRIM16-225	ENST00000584142	PLIN1	O60240	522 aa		13.67	□□□□□ -0.22
TRIM16-225	ENST00000584142	ADAMTS2	O95450	1211 aa		13.67	□□□□□ -0.22
TRIM16-225	ENST00000584142	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.67	□□□□□ -0.22
TRIM16-225	ENST00000584142	FTSJ3	Q8IY81	847 aa	Known RBP	13.67	□□□□□ -0.22
TRIM16-225	ENST00000584142	SPATA31A6	Q5VVP1	1343 aa		13.66	□□□□□ -0.22
TRIM16-225	ENST00000584142	RNMT	O43148	476 aa	Known RBP	13.66	□□□□□ -0.22
TRIM16-225	ENST00000584142	LARP1	Q6PKG0	1096 aa	Known RBP	13.66	□□□□□ -0.22
TRIM16-225	ENST00000584142	CCDC136	Q96JN2	1154 aa		13.66	□□□□□ -0.22
TRIM16-225	ENST00000584142	PHKG2	P15735	406 aa		13.65	□□□□□ -0.22
TRIM16-225	ENST00000584142	MPRIP	Q6WCQ1	1025 aa		13.65	□□□□□ -0.22
TRIM16-225	ENST00000584142	IL17RE	Q8NFR9	667 aa		13.65	□□□□□ -0.22
TRIM16-225	ENST00000584142	ZCRB1	Q8TBF4	217 aa	Known RBP	13.65	□□□□□ -0.22
TRIM16-225	ENST00000584142	DCAF5	Q96JK2	942 aa		13.65	□□□□□ -0.22
TRIM16-225	ENST00000584142	BCL2L13	Q9BXK5	485 aa		13.65	□□□□□ -0.22
TRIM16-225	ENST00000584142	NWD2	Q9ULI1	1742 aa		13.64	□□□□□ -0.23
TRIM16-225	ENST00000584142	BTBD11	A6QL63	1104 aa		13.64	□□□□□ -0.23
TRIM16-225	ENST00000584142	VAMP4	O75379	141 aa		13.64	□□□□□ -0.23
TRIM16-225	ENST00000584142	AAMP	Q13685	434 aa		13.64	□□□□□ -0.23
TRIM16-225	ENST00000584142	SSH1	Q8WYL5	1049 aa		13.64	□□□□□ -0.23
TRIM16-225	ENST00000584142	CRBN	Q96SW2	442 aa		13.64	□□□□□ -0.23
TRIM16-225	ENST00000584142	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.64	□□□□□ -0.23
TRIM16-225	ENST00000584142	STK31	Q9BXU1	1019 aa		13.64	□□□□□ -0.23
TRIM16-225	ENST00000584142	ELL2	O00472	640 aa	Predicted RBP	13.63	□□□□□ -0.23
TRIM16-225	ENST00000584142	C8orf58	Q8NAV2	365 aa		13.63	□□□□□ -0.23
TRIM16-225	ENST00000584142	EXOC6	Q8TAG9	804 aa		13.63	□□□□□ -0.23
TRIM16-225	ENST00000584142	CHMP4B	Q9H444	224 aa	Known RBP	13.63	□□□□□ -0.23
TRIM16-225	ENST00000584142	USP35	Q9P2H5	1018 aa		13.63	□□□□□ -0.23
TRIM16-225	ENST00000584142	ADAMTS7	Q9UKP4	1686 aa		13.63	□□□□□ -0.23
TRIM16-225	ENST00000584142	BRPF1	P55201	1214 aa	Predicted RBP	13.62	□□□□□ -0.23
TRIM16-225	ENST00000584142	API5	Q9BZZ5	524 aa	Known RBP	13.62	□□□□□ -0.23
TRIM16-225	ENST00000584142	LGR6	Q9HBX8	967 aa		13.62	□□□□□ -0.23
TRIM16-225	ENST00000584142	THRAP3	Q9Y2W1	955 aa	Known RBP	13.62	□□□□□ -0.23
TRIM16-225	ENST00000584142	HOXB7	P09629	217 aa		13.61	□□□□□ -0.23
TRIM16-225	ENST00000584142	MEX3C	Q5U5Q3	659 aa	Known RBP	13.61	□□□□□ -0.23
TRIM16-225	ENST00000584142	CCDC30	Q5VVM6	783 aa		13.61	□□□□□ -0.23
TRIM16-225	ENST00000584142	ATF7IP	Q6VMQ6	1270 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms