RNA–Protein interactions for RNA: ENST00000584055.1

EPB41L3-232, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 2

Gene EPB41L3, Length 731 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-232ENST00000584055 DCAF8L1A6NGE4 600 aa23.34■■□□□ 1.33
EPB41L3-232ENST00000584055 EIF4G2P78344 907 aaKnown RBP eCLIP23.34■■□□□ 1.33
EPB41L3-232ENST00000584055 USHBP1Q8N6Y0 703 aa23.34■■□□□ 1.33
EPB41L3-232ENST00000584055 CCER1Q8TC90 406 aaPredicted RBP23.34■■□□□ 1.33
EPB41L3-232ENST00000584055 MTFR1LQ9H019 292 aa23.34■■□□□ 1.33
EPB41L3-232ENST00000584055 CASZ1Q86V15 1759 aa23.34■■□□□ 1.33
EPB41L3-232ENST00000584055 PTGER2P43116 358 aa23.33■■□□□ 1.33
EPB41L3-232ENST00000584055 LRRC4BQ9NT99 713 aa23.33■■□□□ 1.33
EPB41L3-232ENST00000584055 ATF5Q9Y2D1 282 aaPredicted RBP23.33■■□□□ 1.33
EPB41L3-232ENST00000584055 POLR3GLQ9BT43 218 aa23.31■■□□□ 1.32
EPB41L3-232ENST00000584055 EMILIN1Q9Y6C2 1016 aa23.31■■□□□ 1.32
EPB41L3-232ENST00000584055 BTAF1O14981 1849 aa23.3■■□□□ 1.32
EPB41L3-232ENST00000584055 PPM1GO15355 546 aaPredicted RBP23.29■■□□□ 1.32
EPB41L3-232ENST00000584055 ZNF827Q17R98 1081 aa23.29■■□□□ 1.32
EPB41L3-232ENST00000584055 PCDH11XQ9BZA7 1347 aa23.29■■□□□ 1.32
EPB41L3-232ENST00000584055 PCDH11YQ9BZA8 1340 aa23.29■■□□□ 1.32
EPB41L3-232ENST00000584055 KIF20BQ96Q89 1820 aa23.29■■□□□ 1.32
EPB41L3-232ENST00000584055 MYOM1P52179 1685 aa23.28■■□□□ 1.32
EPB41L3-232ENST00000584055 AKT1S1Q96B36 256 aa23.28■■□□□ 1.32
EPB41L3-232ENST00000584055 WASHC2AQ641Q2 1341 aa23.28■■□□□ 1.32
EPB41L3-232ENST00000584055 PAPPAQ13219 1627 aa23.27■■□□□ 1.32
EPB41L3-232ENST00000584055 HSPA5P11021 654 aaKnown RBP23.27■■□□□ 1.32
EPB41L3-232ENST00000584055 NSD2O96028 1365 aa23.27■■□□□ 1.31
EPB41L3-232ENST00000584055 SGIP1Q9BQI5 828 aa23.26■■□□□ 1.31
EPB41L3-232ENST00000584055 HMGB2P26583 209 aaKnown RBP23.25■■□□□ 1.31
EPB41L3-232ENST00000584055 SLC16A10Q8TF71 515 aa23.25■■□□□ 1.31
EPB41L3-232ENST00000584055 POLKQ9UBT6 870 aa23.24■■□□□ 1.31
EPB41L3-232ENST00000584055 RGPD2P0DJD1 1756 aa23.24■■□□□ 1.31
EPB41L3-232ENST00000584055 TFCP2L1Q9NZI6 479 aa23.23■■□□□ 1.31
EPB41L3-232ENST00000584055 CCNL1Q9UK58 526 aaPredicted RBP23.23■■□□□ 1.31
EPB41L3-232ENST00000584055 KAT6BQ8WYB5 2073 aa23.22■■□□□ 1.31
EPB41L3-232ENST00000584055 ARXQ96QS3 562 aa23.22■■□□□ 1.31
EPB41L3-232ENST00000584055 FHDC1Q9C0D6 1143 aaPredicted RBP23.22■■□□□ 1.31
EPB41L3-232ENST00000584055 CYP27B1O15528 508 aa23.21■■□□□ 1.31
EPB41L3-232ENST00000584055 KCNQ4P56696 695 aa23.21■■□□□ 1.31
EPB41L3-232ENST00000584055 SYT17Q9BSW7 474 aa23.21■■□□□ 1.31
EPB41L3-232ENST00000584055 PANK3Q9H999 370 aa23.21■■□□□ 1.31
EPB41L3-232ENST00000584055 SPG7Q9UQ90 795 aa23.21■■□□□ 1.31
EPB41L3-232ENST00000584055 NCAPD2Q15021 1401 aa23.21■■□□□ 1.31
EPB41L3-232ENST00000584055 DOT1LQ8TEK3 1739 aa23.2■■□□□ 1.3
EPB41L3-232ENST00000584055 SHANK3Q9BYB0 1731 aa23.2■■□□□ 1.3
EPB41L3-232ENST00000584055 EYA1Q99502 592 aa23.2■■□□□ 1.3
EPB41L3-232ENST00000584055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.2■■□□□ 1.3
EPB41L3-232ENST00000584055 PNPLA7Q6ZV29 1317 aa23.19■■□□□ 1.3
EPB41L3-232ENST00000584055 YY1P25490 414 aa23.19■■□□□ 1.3
EPB41L3-232ENST00000584055 NKX1-1Q15270 411 aaPredicted RBP23.18■■□□□ 1.3
EPB41L3-232ENST00000584055 MPRIPQ6WCQ1 1025 aa23.18■■□□□ 1.3
EPB41L3-232ENST00000584055 POLD1P28340 1107 aa23.17■■□□□ 1.3
EPB41L3-232ENST00000584055 TNNT2P45379 298 aaPredicted RBP23.17■■□□□ 1.3
EPB41L3-232ENST00000584055 SMARCC1Q92922 1105 aaPredicted RBP23.16■■□□□ 1.3
EPB41L3-232ENST00000584055 MAP3K5Q99683 1374 aa23.15■■□□□ 1.3
EPB41L3-232ENST00000584055 ANKRD26Q9UPS8 1709 aa23.14■■□□□ 1.3
EPB41L3-232ENST00000584055 EIF4A2Q14240 407 aaKnown RBP23.14■■□□□ 1.29
EPB41L3-232ENST00000584055 PALLDQ8WX93 1383 aa23.14■■□□□ 1.29
EPB41L3-232ENST00000584055 PLEKHG2Q9H7P9 1386 aa23.14■■□□□ 1.29
EPB41L3-232ENST00000584055 LY75O60449 1722 aa23.13■■□□□ 1.29
EPB41L3-232ENST00000584055 IFNL2Q8IZJ0 200 aa23.12■■□□□ 1.29
EPB41L3-232ENST00000584055 FLAD1Q8NFF5 587 aa23.11■■□□□ 1.29
EPB41L3-232ENST00000584055 MORC1Q86VD1 984 aa23.1■■□□□ 1.29
EPB41L3-232ENST00000584055 PIGBQ92521 554 aa23.1■■□□□ 1.29
EPB41L3-232ENST00000584055 KNSTRNQ9Y448 316 aa23.1■■□□□ 1.29
EPB41L3-232ENST00000584055 QSER1Q2KHR3 1735 aa23.09■■□□□ 1.29
EPB41L3-232ENST00000584055 PKD1L3Q7Z443 1732 aa23.09■■□□□ 1.29
EPB41L3-232ENST00000584055 MSH5O43196 834 aa23.09■■□□□ 1.29
EPB41L3-232ENST00000584055 PHKG2P15735 406 aa23.09■■□□□ 1.29
EPB41L3-232ENST00000584055 COL23A1Q86Y22 540 aaPredicted RBP23.09■■□□□ 1.29
EPB41L3-232ENST00000584055 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.29
EPB41L3-232ENST00000584055 TMOD3Q9NYL9 352 aa23.08■■□□□ 1.29
EPB41L3-232ENST00000584055 MAP2P11137 1827 aaKnown RBP23.07■■□□□ 1.28
EPB41L3-232ENST00000584055 KLHL34Q8N239 644 aa23.05■■□□□ 1.28
EPB41L3-232ENST00000584055 PLEKHO1Q53GL0 409 aaPredicted RBP23.04■■□□□ 1.28
EPB41L3-232ENST00000584055 AK7Q96M32 723 aa23.04■■□□□ 1.28
EPB41L3-232ENST00000584055 LOC102724428A0A0B4J2F2 783 aa23.03■■□□□ 1.28
EPB41L3-232ENST00000584055 HSP90AB1P08238 724 aaKnown RBP23.03■■□□□ 1.28
EPB41L3-232ENST00000584055 SIK1P57059 783 aa23.03■■□□□ 1.28
EPB41L3-232ENST00000584055 AMOTQ4VCS5 1084 aa23.02■■□□□ 1.28
EPB41L3-232ENST00000584055 DCAF5Q96JK2 942 aa23.01■■□□□ 1.27
EPB41L3-232ENST00000584055 TOGARAM1Q9Y4F4 1720 aa23.01■■□□□ 1.27
EPB41L3-232ENST00000584055 KIF7Q2M1P5 1343 aa23.01■■□□□ 1.27
EPB41L3-232ENST00000584055 ERVV-2B6SEH9 535 aa23■■□□□ 1.27
EPB41L3-232ENST00000584055 GPR162Q16538 588 aa23■■□□□ 1.27
EPB41L3-232ENST00000584055 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
EPB41L3-232ENST00000584055 ASAP1Q9ULH1 1129 aa23■■□□□ 1.27
EPB41L3-232ENST00000584055 ATG3Q9NT62 314 aa22.99■■□□□ 1.27
EPB41L3-232ENST00000584055 COL24A1Q17RW2 1714 aa22.99■■□□□ 1.27
EPB41L3-232ENST00000584055 C5P01031 1676 aa22.98■■□□□ 1.27
EPB41L3-232ENST00000584055 MSL1Q68DK7 614 aa22.98■■□□□ 1.27
EPB41L3-232ENST00000584055 TUBGCP6Q96RT7 1819 aa22.97■■□□□ 1.27
EPB41L3-232ENST00000584055 SSFA2P28290 1259 aa22.97■■□□□ 1.27
EPB41L3-232ENST00000584055 ATP6V1AP38606 617 aa22.97■■□□□ 1.27
EPB41L3-232ENST00000584055 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
EPB41L3-232ENST00000584055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.96■■□□□ 1.27
EPB41L3-232ENST00000584055 LINC00116Q8NCU8 138 aa22.96■■□□□ 1.27
EPB41L3-232ENST00000584055 ITGB4P16144 1822 aa22.96■■□□□ 1.27
EPB41L3-232ENST00000584055 IL13P35225 146 aa22.95■■□□□ 1.26
EPB41L3-232ENST00000584055 SULT6B1Q6IMI4 303 aa22.95■■□□□ 1.26
EPB41L3-232ENST00000584055 AEBP1Q8IUX7 1158 aa22.95■■□□□ 1.26
EPB41L3-232ENST00000584055 NLGN2Q8NFZ4 835 aa22.95■■□□□ 1.26
EPB41L3-232ENST00000584055 C4BP0C0L5 1744 aa22.94■■□□□ 1.26
EPB41L3-232ENST00000584055 PHF14O94880 888 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms