RNA–Protein interactions for RNA: ENST00000584052.5

RIOK3-208, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-208ENST00000584052 USHBP1Q8N6Y0 703 aa21.05■□□□□ 0.96
RIOK3-208ENST00000584052 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
RIOK3-208ENST00000584052 KCNQ4P56696 695 aa21.04■□□□□ 0.96
RIOK3-208ENST00000584052 NBPF6Q5VWK0 638 aa21.04■□□□□ 0.96
RIOK3-208ENST00000584052 NBPF4Q96M43 638 aa21.04■□□□□ 0.96
RIOK3-208ENST00000584052 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
RIOK3-208ENST00000584052 PPM1GO15355 546 aaPredicted RBP21.03■□□□□ 0.96
RIOK3-208ENST00000584052 SLC16A10Q8TF71 515 aa21.03■□□□□ 0.96
RIOK3-208ENST00000584052 CASZ1Q86V15 1759 aa21.02■□□□□ 0.96
RIOK3-208ENST00000584052 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
RIOK3-208ENST00000584052 CCNL1Q9UK58 526 aaPredicted RBP21.02■□□□□ 0.96
RIOK3-208ENST00000584052 GPR162Q16538 588 aa21.01■□□□□ 0.95
RIOK3-208ENST00000584052 HSP90AB2PQ58FF8 381 aa21.01■□□□□ 0.95
RIOK3-208ENST00000584052 AKT1S1Q96B36 256 aa21.01■□□□□ 0.95
RIOK3-208ENST00000584052 CGNL1Q0VF96 1302 aa21.01■□□□□ 0.95
RIOK3-208ENST00000584052 BTAF1O14981 1849 aa21■□□□□ 0.95
RIOK3-208ENST00000584052 PELP1Q8IZL8 1130 aaKnown RBP21■□□□□ 0.95
RIOK3-208ENST00000584052 RTL1A6NKG5 1358 aa20.99■□□□□ 0.95
RIOK3-208ENST00000584052 SGIP1Q9BQI5 828 aa20.99■□□□□ 0.95
RIOK3-208ENST00000584052 HMGB2P26583 209 aaKnown RBP20.98■□□□□ 0.95
RIOK3-208ENST00000584052 MYOM1P52179 1685 aa20.96■□□□□ 0.95
RIOK3-208ENST00000584052 FAM208AQ9UK61 1670 aaKnown RBP20.96■□□□□ 0.95
RIOK3-208ENST00000584052 MPRIPQ6WCQ1 1025 aa20.96■□□□□ 0.95
RIOK3-208ENST00000584052 PNPLA7Q6ZV29 1317 aa20.95■□□□□ 0.94
RIOK3-208ENST00000584052 TIMELESSQ9UNS1 1208 aa20.94■□□□□ 0.94
RIOK3-208ENST00000584052 PCDH11XQ9BZA7 1347 aa20.94■□□□□ 0.94
RIOK3-208ENST00000584052 PCDH11YQ9BZA8 1340 aa20.94■□□□□ 0.94
RIOK3-208ENST00000584052 INSRP06213 1382 aa20.94■□□□□ 0.94
RIOK3-208ENST00000584052 FLT4P35916 1363 aa20.94■□□□□ 0.94
RIOK3-208ENST00000584052 MEGF6O75095 1541 aa20.94■□□□□ 0.94
RIOK3-208ENST00000584052 CARD14Q9BXL6 1004 aa20.93■□□□□ 0.94
RIOK3-208ENST00000584052 CCER1Q8TC90 406 aaPredicted RBP20.92■□□□□ 0.94
RIOK3-208ENST00000584052 EMILIN1Q9Y6C2 1016 aa20.92■□□□□ 0.94
RIOK3-208ENST00000584052 ZNF784Q8NCA9 323 aaPredicted RBP20.91■□□□□ 0.94
RIOK3-208ENST00000584052 SPG7Q9UQ90 795 aa20.91■□□□□ 0.94
RIOK3-208ENST00000584052 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.94
RIOK3-208ENST00000584052 KIF24Q5T7B8 1368 aa20.89■□□□□ 0.93
RIOK3-208ENST00000584052 COL23A1Q86Y22 540 aaPredicted RBP20.89■□□□□ 0.93
RIOK3-208ENST00000584052 SMARCC1Q92922 1105 aaPredicted RBP20.89■□□□□ 0.93
RIOK3-208ENST00000584052 RGPD2P0DJD1 1756 aa20.89■□□□□ 0.93
RIOK3-208ENST00000584052 TNNT2P45379 298 aaPredicted RBP20.88■□□□□ 0.93
RIOK3-208ENST00000584052 FLAD1Q8NFF5 587 aa20.88■□□□□ 0.93
RIOK3-208ENST00000584052 NSD2O96028 1365 aa20.87■□□□□ 0.93
RIOK3-208ENST00000584052 PAPPAQ13219 1627 aa20.87■□□□□ 0.93
RIOK3-208ENST00000584052 MSL1Q68DK7 614 aa20.87■□□□□ 0.93
RIOK3-208ENST00000584052 MAP3K5Q99683 1374 aa20.86■□□□□ 0.93
RIOK3-208ENST00000584052 CYP27B1O15528 508 aa20.86■□□□□ 0.93
RIOK3-208ENST00000584052 DOT1LQ8TEK3 1739 aa20.86■□□□□ 0.93
RIOK3-208ENST00000584052 AK7Q96M32 723 aa20.85■□□□□ 0.93
RIOK3-208ENST00000584052 PALLDQ8WX93 1383 aa20.85■□□□□ 0.93
RIOK3-208ENST00000584052 WASHC2AQ641Q2 1341 aa20.83■□□□□ 0.93
RIOK3-208ENST00000584052 NLGN2Q8NFZ4 835 aa20.83■□□□□ 0.93
RIOK3-208ENST00000584052 GRIN3BO60391 1043 aa20.82■□□□□ 0.92
RIOK3-208ENST00000584052 PIGBQ92521 554 aa20.82■□□□□ 0.92
RIOK3-208ENST00000584052 EYA1Q99502 592 aa20.82■□□□□ 0.92
RIOK3-208ENST00000584052 TMOD3Q9NYL9 352 aa20.82■□□□□ 0.92
RIOK3-208ENST00000584052 PHF14O94880 888 aa20.81■□□□□ 0.92
RIOK3-208ENST00000584052 EIF4G2P78344 907 aaKnown RBP eCLIP20.81■□□□□ 0.92
RIOK3-208ENST00000584052 KIF20BQ96Q89 1820 aa20.81■□□□□ 0.92
RIOK3-208ENST00000584052 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
RIOK3-208ENST00000584052 POLKQ9UBT6 870 aa20.8■□□□□ 0.92
RIOK3-208ENST00000584052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.922e-6■□□□□ 9.5
RIOK3-208ENST00000584052 NKX1-1Q15270 411 aaPredicted RBP20.78■□□□□ 0.92
RIOK3-208ENST00000584052 LY75O60449 1722 aa20.77■□□□□ 0.92
RIOK3-208ENST00000584052 SHANK3Q9BYB0 1731 aa20.76■□□□□ 0.91
RIOK3-208ENST00000584052 LOC102724428A0A0B4J2F2 783 aa20.76■□□□□ 0.91
RIOK3-208ENST00000584052 ATP6V1AP38606 617 aa20.76■□□□□ 0.91
RIOK3-208ENST00000584052 SIK1P57059 783 aa20.76■□□□□ 0.91
RIOK3-208ENST00000584052 PANK3Q9H999 370 aa20.76■□□□□ 0.91
RIOK3-208ENST00000584052 UTRNP46939 3433 aa20.75■□□□□ 0.91
RIOK3-208ENST00000584052 CHD4Q14839 1912 aa20.75■□□□□ 0.91
RIOK3-208ENST00000584052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
RIOK3-208ENST00000584052 EIF4A2Q14240 407 aaKnown RBP20.75■□□□□ 0.91
RIOK3-208ENST00000584052 CD2APQ9Y5K6 639 aa20.75■□□□□ 0.91
RIOK3-208ENST00000584052 QSER1Q2KHR3 1735 aa20.75■□□□□ 0.91
RIOK3-208ENST00000584052 HSPA5P11021 654 aaKnown RBP20.74■□□□□ 0.91
RIOK3-208ENST00000584052 PHKG2P15735 406 aa20.74■□□□□ 0.91
RIOK3-208ENST00000584052 ASAP1Q9ULH1 1129 aa20.74■□□□□ 0.91
RIOK3-208ENST00000584052 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
RIOK3-208ENST00000584052 C1QTNF8P60827 252 aa20.73■□□□□ 0.91
RIOK3-208ENST00000584052 SMIM5Q71RC9 77 aa20.73■□□□□ 0.91
RIOK3-208ENST00000584052 MORC1Q86VD1 984 aa20.73■□□□□ 0.91
RIOK3-208ENST00000584052 GNPATO15228 680 aa20.72■□□□□ 0.91
RIOK3-208ENST00000584052 GIGYF1O75420 1035 aaPredicted RBP20.72■□□□□ 0.91
RIOK3-208ENST00000584052 YBX3P16989 372 aaKnown RBP eCLIP20.72■□□□□ 0.911e-9■□□□□ 8.7
RIOK3-208ENST00000584052 PLEKHO1Q53GL0 409 aaPredicted RBP20.72■□□□□ 0.91
RIOK3-208ENST00000584052 RBM42Q9BTD8 480 aaKnown RBP20.72■□□□□ 0.91
RIOK3-208ENST00000584052 HSP90AB1P08238 724 aaKnown RBP20.71■□□□□ 0.91
RIOK3-208ENST00000584052 SSFA2P28290 1259 aa20.71■□□□□ 0.91
RIOK3-208ENST00000584052 MAP2P11137 1827 aaKnown RBP20.7■□□□□ 0.9
RIOK3-208ENST00000584052 TUBGCP6Q96RT7 1819 aa20.7■□□□□ 0.9
RIOK3-208ENST00000584052 LINC00116Q8NCU8 138 aa20.7■□□□□ 0.9
RIOK3-208ENST00000584052 ATG3Q9NT62 314 aa20.69■□□□□ 0.9
RIOK3-208ENST00000584052 WWC3Q9ULE0 1092 aa20.69■□□□□ 0.9
RIOK3-208ENST00000584052 KNSTRNQ9Y448 316 aa20.69■□□□□ 0.9
RIOK3-208ENST00000584052 C5P01031 1676 aa20.68■□□□□ 0.9
RIOK3-208ENST00000584052 CABP4P57796 275 aa20.68■□□□□ 0.9
RIOK3-208ENST00000584052 ERVV-2B6SEH9 535 aa20.67■□□□□ 0.9
RIOK3-208ENST00000584052 AMOTQ4VCS5 1084 aa20.67■□□□□ 0.9
RIOK3-208ENST00000584052 C1orf141Q5JVX7 400 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms