RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 ANKRD36BQ8N2N9 1353 aa18.98■□□□□ 0.63
CCDC57-218ENST00000583593 AMPHP49418 695 aa18.98■□□□□ 0.63
CCDC57-218ENST00000583593 KCNQ4P56696 695 aa18.98■□□□□ 0.63
CCDC57-218ENST00000583593 ZNF784Q8NCA9 323 aaPredicted RBP18.97■□□□□ 0.63
CCDC57-218ENST00000583593 ZCRB1Q8TBF4 217 aaKnown RBP18.97■□□□□ 0.63
CCDC57-218ENST00000583593 CHD4Q14839 1912 aa18.97■□□□□ 0.63
CCDC57-218ENST00000583593 PNPLA7Q6ZV29 1317 aa18.97■□□□□ 0.63
CCDC57-218ENST00000583593 FYB1O15117 783 aa18.96■□□□□ 0.63
CCDC57-218ENST00000583593 NBPF6Q5VWK0 638 aa18.96■□□□□ 0.63
CCDC57-218ENST00000583593 SYTL4Q96C24 671 aaPredicted RBP18.96■□□□□ 0.63
CCDC57-218ENST00000583593 NBPF4Q96M43 638 aa18.96■□□□□ 0.63
CCDC57-218ENST00000583593 RRS1Q15050 365 aaKnown RBP18.95■□□□□ 0.62
CCDC57-218ENST00000583593 SLC16A10Q8TF71 515 aa18.95■□□□□ 0.62
CCDC57-218ENST00000583593 RTL1A6NKG5 1358 aa18.94■□□□□ 0.62
CCDC57-218ENST00000583593 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
CCDC57-218ENST00000583593 GGNBP2Q9H3C7 697 aa18.94■□□□□ 0.62
CCDC57-218ENST00000583593 USHBP1Q8N6Y0 703 aa18.92■□□□□ 0.62
CCDC57-218ENST00000583593 TFCP2L1Q9NZI6 479 aa18.91■□□□□ 0.62
CCDC57-218ENST00000583593 TMF1P82094 1093 aa18.9■□□□□ 0.62
CCDC57-218ENST00000583593 USP47Q96K76 1375 aa18.9■□□□□ 0.62
CCDC57-218ENST00000583593 KIF20BQ96Q89 1820 aa18.89■□□□□ 0.61
CCDC57-218ENST00000583593 HSP90AB2PQ58FF8 381 aa18.89■□□□□ 0.61
CCDC57-218ENST00000583593 CCNL1Q9UK58 526 aaPredicted RBP18.89■□□□□ 0.61
CCDC57-218ENST00000583593 POLD1P28340 1107 aa18.88■□□□□ 0.61
CCDC57-218ENST00000583593 CGNL1Q0VF96 1302 aa18.88■□□□□ 0.61
CCDC57-218ENST00000583593 INSRP06213 1382 aa18.87■□□□□ 0.61
CCDC57-218ENST00000583593 COL23A1Q86Y22 540 aaPredicted RBP18.87■□□□□ 0.61
CCDC57-218ENST00000583593 NLGN2Q8NFZ4 835 aa18.87■□□□□ 0.61
CCDC57-218ENST00000583593 GPR162Q16538 588 aa18.86■□□□□ 0.61
CCDC57-218ENST00000583593 KLHL34Q8N239 644 aa18.86■□□□□ 0.61
CCDC57-218ENST00000583593 RAPGEF4Q8WZA2 1011 aa18.86■□□□□ 0.61
CCDC57-218ENST00000583593 SMG6Q86US8 1419 aaKnown RBP18.85■□□□□ 0.61
CCDC57-218ENST00000583593 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
CCDC57-218ENST00000583593 C5P01031 1676 aa18.85■□□□□ 0.61
CCDC57-218ENST00000583593 FLT4P35916 1363 aa18.84■□□□□ 0.61
CCDC57-218ENST00000583593 TAF1LQ8IZX4 1826 aa18.84■□□□□ 0.61
CCDC57-218ENST00000583593 TOGARAM1Q9Y4F4 1720 aa18.84■□□□□ 0.61
CCDC57-218ENST00000583593 TATP17735 454 aaPredicted RBP18.84■□□□□ 0.61
CCDC57-218ENST00000583593 KIF24Q5T7B8 1368 aa18.83■□□□□ 0.61
CCDC57-218ENST00000583593 CYP27B1O15528 508 aa18.83■□□□□ 0.6
CCDC57-218ENST00000583593 ITGB4P16144 1822 aa18.82■□□□□ 0.6
CCDC57-218ENST00000583593 PCDH11XQ9BZA7 1347 aa18.81■□□□□ 0.6
CCDC57-218ENST00000583593 PCDH11YQ9BZA8 1340 aa18.81■□□□□ 0.6
CCDC57-218ENST00000583593 PKD1L3Q7Z443 1732 aa18.81■□□□□ 0.6
CCDC57-218ENST00000583593 EMILIN1Q9Y6C2 1016 aa18.81■□□□□ 0.6
CCDC57-218ENST00000583593 CDCA8Q53HL2 280 aa18.8■□□□□ 0.6
CCDC57-218ENST00000583593 PELP1Q8IZL8 1130 aaKnown RBP18.8■□□□□ 0.6
CCDC57-218ENST00000583593 NCAPD2Q15021 1401 aa18.8■□□□□ 0.6
CCDC57-218ENST00000583593 PALLDQ8WX93 1383 aa18.8■□□□□ 0.6
CCDC57-218ENST00000583593 MSH5O43196 834 aa18.79■□□□□ 0.6
CCDC57-218ENST00000583593 YBX3P16989 372 aaKnown RBP eCLIP18.79■□□□□ 0.6
CCDC57-218ENST00000583593 C1QTNF8P60827 252 aa18.79■□□□□ 0.6
CCDC57-218ENST00000583593 MSL1Q68DK7 614 aa18.79■□□□□ 0.6
CCDC57-218ENST00000583593 MPRIPQ6WCQ1 1025 aa18.79■□□□□ 0.6
CCDC57-218ENST00000583593 NSD3Q9BZ95 1437 aa18.79■□□□□ 0.6
CCDC57-218ENST00000583593 ANKRD26Q9UPS8 1709 aa18.79■□□□□ 0.6
CCDC57-218ENST00000583593 AMIGO3Q86WK7 504 aa18.78■□□□□ 0.6
CCDC57-218ENST00000583593 C4BP0C0L5 1744 aa18.77■□□□□ 0.59
CCDC57-218ENST00000583593 MAP2P11137 1827 aaKnown RBP18.77■□□□□ 0.59
CCDC57-218ENST00000583593 NKX1-1Q15270 411 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-218ENST00000583593 TRIM26Q12899 539 aaPredicted RBP18.75■□□□□ 0.59
CCDC57-218ENST00000583593 PIGBQ92521 554 aa18.75■□□□□ 0.59
CCDC57-218ENST00000583593 UBR3Q6ZT12 1888 aa18.75■□□□□ 0.59
CCDC57-218ENST00000583593 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
CCDC57-218ENST00000583593 WASHC2AQ641Q2 1341 aa18.74■□□□□ 0.59
CCDC57-218ENST00000583593 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
CCDC57-218ENST00000583593 FLAD1Q8NFF5 587 aa18.73■□□□□ 0.59
CCDC57-218ENST00000583593 EYA1Q99502 592 aa18.73■□□□□ 0.59
CCDC57-218ENST00000583593 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
CCDC57-218ENST00000583593 GRIN3BO60391 1043 aa18.72■□□□□ 0.59
CCDC57-218ENST00000583593 SMARCC1Q92922 1105 aaPredicted RBP18.72■□□□□ 0.59
CCDC57-218ENST00000583593 POLKQ9UBT6 870 aa18.71■□□□□ 0.59
CCDC57-218ENST00000583593 CD2APQ9Y5K6 639 aa18.71■□□□□ 0.59
CCDC57-218ENST00000583593 HMGB2P26583 209 aaKnown RBP18.7■□□□□ 0.58
CCDC57-218ENST00000583593 SPG7Q9UQ90 795 aa18.7■□□□□ 0.58
CCDC57-218ENST00000583593 GIGYF1O75420 1035 aaPredicted RBP18.69■□□□□ 0.58
CCDC57-218ENST00000583593 LINC00116Q8NCU8 138 aa18.69■□□□□ 0.58
CCDC57-218ENST00000583593 AK7Q96M32 723 aa18.69■□□□□ 0.58
CCDC57-218ENST00000583593 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.69■□□□□ 0.58
CCDC57-218ENST00000583593 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
CCDC57-218ENST00000583593 LOC102724428A0A0B4J2F2 783 aa18.68■□□□□ 0.58
CCDC57-218ENST00000583593 PHF14O94880 888 aa18.68■□□□□ 0.58
CCDC57-218ENST00000583593 SIK1P57059 783 aa18.68■□□□□ 0.58
CCDC57-218ENST00000583593 PHKG2P15735 406 aa18.67■□□□□ 0.58
CCDC57-218ENST00000583593 ITPK1Q13572 414 aa18.67■□□□□ 0.58
CCDC57-218ENST00000583593 ASAP1Q9ULH1 1129 aa18.67■□□□□ 0.58
CCDC57-218ENST00000583593 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
CCDC57-218ENST00000583593 CEP350Q5VT06 3117 aa18.67■□□□□ 0.58
CCDC57-218ENST00000583593 SSFA2P28290 1259 aa18.65■□□□□ 0.58
CCDC57-218ENST00000583593 EIF4A2Q14240 407 aaKnown RBP18.65■□□□□ 0.58
CCDC57-218ENST00000583593 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
CCDC57-218ENST00000583593 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
CCDC57-218ENST00000583593 ATG3Q9NT62 314 aa18.64■□□□□ 0.57
CCDC57-218ENST00000583593 ATP10DQ9P241 1426 aa18.64■□□□□ 0.57
CCDC57-218ENST00000583593 ATP6V1AP38606 617 aa18.62■□□□□ 0.57
CCDC57-218ENST00000583593 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
CCDC57-218ENST00000583593 IGSF1Q8N6C5 1336 aa18.62■□□□□ 0.57
CCDC57-218ENST00000583593 ADCY9O60503 1353 aa18.61■□□□□ 0.57
CCDC57-218ENST00000583593 GNPATO15228 680 aa18.61■□□□□ 0.57
CCDC57-218ENST00000583593 SLC4A9Q96Q91 983 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms