RNA–Protein interactions for RNA: ENST00000583482.6

SPECC1-221, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-221ENST00000583482 CABP2Q9NPB3 220 aa24.11■■□□□ 1.45
SPECC1-221ENST00000583482 C5P01031 1676 aa24.11■■□□□ 1.45
SPECC1-221ENST00000583482 CABP1Q9NZU7 370 aa24.09■■□□□ 1.45
SPECC1-221ENST00000583482 CCNL1Q9UK58 526 aaPredicted RBP24.09■■□□□ 1.45
SPECC1-221ENST00000583482 ANKRD36BQ8N2N9 1353 aa24.08■■□□□ 1.45
SPECC1-221ENST00000583482 HSPA1AP0DMV8 641 aaKnown RBP24.08■■□□□ 1.45
SPECC1-221ENST00000583482 HSPA1BP0DMV9 641 aaKnown RBP24.08■■□□□ 1.45
SPECC1-221ENST00000583482 NLRP2Q9NX02 1062 aa24.08■■□□□ 1.45
SPECC1-221ENST00000583482 TAF1LQ8IZX4 1826 aa24.06■■□□□ 1.44
SPECC1-221ENST00000583482 FSTL1Q12841 308 aa24.06■■□□□ 1.44
SPECC1-221ENST00000583482 KIAA1551Q9HCM1 1747 aa24.06■■□□□ 1.44
SPECC1-221ENST00000583482 TOGARAM1Q9Y4F4 1720 aa24.06■■□□□ 1.44
SPECC1-221ENST00000583482 LTN1O94822 1766 aa24.06■■□□□ 1.44
SPECC1-221ENST00000583482 PRIM1P49642 420 aaKnown RBP24.05■■□□□ 1.44
SPECC1-221ENST00000583482 SYTL4Q96C24 671 aaPredicted RBP24.04■■□□□ 1.44
SPECC1-221ENST00000583482 TTC21BQ7Z4L5 1316 aa24.04■■□□□ 1.44
SPECC1-221ENST00000583482 DDX54Q8TDD1 881 aaKnown RBP24.02■■□□□ 1.44
SPECC1-221ENST00000583482 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
SPECC1-221ENST00000583482 KIF13BQ9NQT8 1826 aa24■■□□□ 1.43
SPECC1-221ENST00000583482 STAC3Q96MF2 364 aa24■■□□□ 1.43
SPECC1-221ENST00000583482 PKD1L3Q7Z443 1732 aa24■■□□□ 1.43
SPECC1-221ENST00000583482 C16orf71Q8IYS4 520 aaPredicted RBP23.99■■□□□ 1.43
SPECC1-221ENST00000583482 C10orf71Q711Q0 1435 aa23.98■■□□□ 1.43
SPECC1-221ENST00000583482 PXDNLA1KZ92 1463 aa23.98■■□□□ 1.43
SPECC1-221ENST00000583482 N4BP2Q86UW6 1770 aaPredicted RBP23.98■■□□□ 1.43
SPECC1-221ENST00000583482 UBR3Q6ZT12 1888 aa23.98■■□□□ 1.43
SPECC1-221ENST00000583482 FLAD1Q8NFF5 587 aa23.97■■□□□ 1.43
SPECC1-221ENST00000583482 TTC21AQ8NDW8 1320 aa23.96■■□□□ 1.43
SPECC1-221ENST00000583482 AMIGO3Q86WK7 504 aa23.96■■□□□ 1.43
SPECC1-221ENST00000583482 ANKRD24Q8TF21 1146 aa23.96■■□□□ 1.43
SPECC1-221ENST00000583482 C4BP0C0L5 1744 aa23.96■■□□□ 1.43
SPECC1-221ENST00000583482 KCPQ6ZWJ8 1503 aa23.95■■□□□ 1.43
SPECC1-221ENST00000583482 TNRC6CQ9HCJ0 1690 aaKnown RBP23.95■■□□□ 1.42
SPECC1-221ENST00000583482 USP47Q96K76 1375 aa23.94■■□□□ 1.42
SPECC1-221ENST00000583482 CENPJQ9HC77 1338 aaPredicted RBP23.94■■□□□ 1.42
SPECC1-221ENST00000583482 BRCA1P38398 1863 aaKnown RBP23.94■■□□□ 1.42
SPECC1-221ENST00000583482 FAM208AQ9UK61 1670 aaKnown RBP23.93■■□□□ 1.42
SPECC1-221ENST00000583482 PLEKHG2Q9H7P9 1386 aa23.91■■□□□ 1.42
SPECC1-221ENST00000583482 MON2Q7Z3U7 1717 aa23.9■■□□□ 1.42
SPECC1-221ENST00000583482 BCS1LQ9Y276 419 aa23.89■■□□□ 1.41
SPECC1-221ENST00000583482 ARHGAP27Q6ZUM4 889 aa23.88■■□□□ 1.41
SPECC1-221ENST00000583482 SMIM5Q71RC9 77 aa23.88■■□□□ 1.41
SPECC1-221ENST00000583482 ZNF692Q9BU19 519 aaPredicted RBP23.88■■□□□ 1.41
SPECC1-221ENST00000583482 USP31Q70CQ4 1352 aa23.88■■□□□ 1.41
SPECC1-221ENST00000583482 NBPF1Q3BBV0 1214 aa23.87■■□□□ 1.41
SPECC1-221ENST00000583482 C9orf131Q5VYM1 1079 aa23.87■■□□□ 1.41
SPECC1-221ENST00000583482 SMC1BQ8NDV3 1235 aa23.87■■□□□ 1.41
SPECC1-221ENST00000583482 ARFGEF1Q9Y6D6 1849 aa23.87■■□□□ 1.41
SPECC1-221ENST00000583482 FAM161AQ3B820 660 aa23.85■■□□□ 1.41
SPECC1-221ENST00000583482 RRAGCQ9HB90 399 aa23.84■■□□□ 1.41
SPECC1-221ENST00000583482 MEGF6O75095 1541 aa23.84■■□□□ 1.41
SPECC1-221ENST00000583482 KDM2BQ8NHM5 1336 aa23.84■■□□□ 1.41
SPECC1-221ENST00000583482 RGPD2P0DJD1 1756 aa23.83■■□□□ 1.41
SPECC1-221ENST00000583482 PALLDQ8WX93 1383 aa23.82■■□□□ 1.4
SPECC1-221ENST00000583482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.82■■□□□ 1.4
SPECC1-221ENST00000583482 PHF14O94880 888 aa23.82■■□□□ 1.4
SPECC1-221ENST00000583482 AK7Q96M32 723 aa23.81■■□□□ 1.4
SPECC1-221ENST00000583482 KTN1Q86UP2 1357 aaKnown RBP23.8■■□□□ 1.4
SPECC1-221ENST00000583482 A0A0G2JLW4 131 aa23.8■■□□□ 1.4
SPECC1-221ENST00000583482 SBF1O95248 1867 aa23.8■■□□□ 1.4
SPECC1-221ENST00000583482 NSD3Q9BZ95 1437 aa23.8■■□□□ 1.4
SPECC1-221ENST00000583482 TGFB2P61812 414 aa23.79■■□□□ 1.4
SPECC1-221ENST00000583482 ZCRB1Q8TBF4 217 aaKnown RBP23.79■■□□□ 1.4
SPECC1-221ENST00000583482 MAP2P11137 1827 aaKnown RBP23.77■■□□□ 1.4
SPECC1-221ENST00000583482 HMGB2P26583 209 aaKnown RBP23.77■■□□□ 1.4
SPECC1-221ENST00000583482 FOXN1O15353 648 aa23.76■■□□□ 1.39
SPECC1-221ENST00000583482 FCHSD2O94868 740 aa23.76■■□□□ 1.39
SPECC1-221ENST00000583482 MMP10P09238 476 aa23.76■■□□□ 1.39
SPECC1-221ENST00000583482 SSFA2P28290 1259 aa23.76■■□□□ 1.39
SPECC1-221ENST00000583482 NME9Q86XW9 330 aa23.76■■□□□ 1.39
SPECC1-221ENST00000583482 EVC2Q86UK5 1308 aa23.76■■□□□ 1.39
SPECC1-221ENST00000583482 ITGB4P16144 1822 aa23.75■■□□□ 1.39
SPECC1-221ENST00000583482 DPEP1P16444 411 aa23.74■■□□□ 1.39
SPECC1-221ENST00000583482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.74■■□□□ 1.39
SPECC1-221ENST00000583482 LTV1Q96GA3 475 aaPredicted RBP23.74■■□□□ 1.39
SPECC1-221ENST00000583482 PRDM10Q9NQV6 1147 aa23.74■■□□□ 1.39
SPECC1-221ENST00000583482 IP6K1Q92551 441 aa23.73■■□□□ 1.39
SPECC1-221ENST00000583482 RNF181Q9P0P0 153 aa23.73■■□□□ 1.39
SPECC1-221ENST00000583482 SBNO2Q9Y2G9 1366 aa23.71■■□□□ 1.39
SPECC1-221ENST00000583482 C4AP0C0L4 1744 aa23.7■■□□□ 1.39
SPECC1-221ENST00000583482 KCNA3P22001 575 aa23.7■■□□□ 1.38
SPECC1-221ENST00000583482 CD163L1Q9NR16 1453 aa23.69■■□□□ 1.38
SPECC1-221ENST00000583482 LINC00116Q8NCU8 138 aa23.68■■□□□ 1.38
SPECC1-221ENST00000583482 DCAF5Q96JK2 942 aa23.68■■□□□ 1.38
SPECC1-221ENST00000583482 MPRIPQ6WCQ1 1025 aa23.65■■□□□ 1.38
SPECC1-221ENST00000583482 ABHD8Q96I13 439 aa23.65■■□□□ 1.38
SPECC1-221ENST00000583482 RAB3GAP2Q9H2M9 1393 aa23.65■■□□□ 1.38
SPECC1-221ENST00000583482 MKRN1Q9UHC7 482 aaKnown RBP23.64■■□□□ 1.37
SPECC1-221ENST00000583482 SMARCC1Q92922 1105 aaPredicted RBP23.63■■□□□ 1.37
SPECC1-221ENST00000583482 TNRC18O15417 2968 aaPredicted RBP23.63■■□□□ 1.37
SPECC1-221ENST00000583482 KDM6AO15550 1401 aaPredicted RBP23.62■■□□□ 1.37
SPECC1-221ENST00000583482 GNPATO15228 680 aa23.62■■□□□ 1.37
SPECC1-221ENST00000583482 VEGFAP15692 232 aaPredicted RBP23.61■■□□□ 1.37
SPECC1-221ENST00000583482 CTCFP49711 727 aaPredicted RBP23.61■■□□□ 1.37
SPECC1-221ENST00000583482 MLLT1Q03111 559 aaPredicted RBP23.61■■□□□ 1.37
SPECC1-221ENST00000583482 CCDC87Q9NVE4 849 aa23.61■■□□□ 1.37
SPECC1-221ENST00000583482 CGNL1Q0VF96 1302 aa23.6■■□□□ 1.37
SPECC1-221ENST00000583482 ZC3H4Q9UPT8 1303 aaKnown RBP23.6■■□□□ 1.37
SPECC1-221ENST00000583482 TIAM2Q8IVF5 1701 aa23.6■■□□□ 1.37
SPECC1-221ENST00000583482 CREBZFQ9NS37 354 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms