RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 GJD4Q96KN9 370 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-225ENST00000583438 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-225ENST00000583438 TYW1BQ6NUM6 668 aa11.86□□□□□ -0.51
PPP4R1-225ENST00000583438 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
PPP4R1-225ENST00000583438 THSD7AQ9UPZ6 1657 aa11.86□□□□□ -0.51
PPP4R1-225ENST00000583438 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
PPP4R1-225ENST00000583438 DEFB132Q7Z7B7 95 aa11.85□□□□□ -0.51
PPP4R1-225ENST00000583438 MPHOSPH9Q99550 1183 aa11.85□□□□□ -0.51
PPP4R1-225ENST00000583438 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
PPP4R1-225ENST00000583438 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
PPP4R1-225ENST00000583438 CFAP70Q5T0N1 1121 aa11.84□□□□□ -0.51
PPP4R1-225ENST00000583438 BARGINQ6ZT62 677 aa11.84□□□□□ -0.51
PPP4R1-225ENST00000583438 COL14A1Q05707 1796 aaKnown RBP11.84□□□□□ -0.51
PPP4R1-225ENST00000583438 PRR36Q9H6K5 1346 aa11.84□□□□□ -0.51
PPP4R1-225ENST00000583438 MAP3K7O43318 606 aa11.83□□□□□ -0.52
PPP4R1-225ENST00000583438 UNC5CLQ8IV45 518 aa11.83□□□□□ -0.52
PPP4R1-225ENST00000583438 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
PPP4R1-225ENST00000583438 BLMP54132 1417 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-225ENST00000583438 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
PPP4R1-225ENST00000583438 TSR1Q2NL82 804 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-225ENST00000583438 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
PPP4R1-225ENST00000583438 FBXW7Q969H0 707 aa11.82□□□□□ -0.52
PPP4R1-225ENST00000583438 C14orf93Q9H972 538 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-225ENST00000583438 SLC24A3Q9HC58 644 aa11.82□□□□□ -0.52
PPP4R1-225ENST00000583438 SAFB2Q14151 953 aaKnown RBP eCLIP11.81□□□□□ -0.52
PPP4R1-225ENST00000583438 ZDHHC16Q969W1 377 aa11.81□□□□□ -0.52
PPP4R1-225ENST00000583438 SBNO1A3KN83 1393 aa11.8□□□□□ -0.52
PPP4R1-225ENST00000583438 ITSN1Q15811 1721 aa11.8□□□□□ -0.52
PPP4R1-225ENST00000583438 ST18O60284 1047 aa11.8□□□□□ -0.52
PPP4R1-225ENST00000583438 PTGDRQ13258 359 aa11.8□□□□□ -0.52
PPP4R1-225ENST00000583438 SEPT12Q8IYM1 358 aa11.8□□□□□ -0.52
PPP4R1-225ENST00000583438 ADAM33Q9BZ11 813 aa11.8□□□□□ -0.52
PPP4R1-225ENST00000583438 TULP4Q9NRJ4 1543 aa11.8□□□□□ -0.52
PPP4R1-225ENST00000583438 RREB1Q92766 1687 aa11.79□□□□□ -0.52
PPP4R1-225ENST00000583438 FAM83GA6ND36 823 aa11.79□□□□□ -0.52
PPP4R1-225ENST00000583438 PRAM1Q96QH2 718 aa11.79□□□□□ -0.52
PPP4R1-225ENST00000583438 NPDC1Q9NQX5 325 aaPredicted RBP11.79□□□□□ -0.52
PPP4R1-225ENST00000583438 ANKARQ7Z5J8 1434 aa11.78□□□□□ -0.52
PPP4R1-225ENST00000583438 ATP7BP35670 1465 aa11.78□□□□□ -0.52
PPP4R1-225ENST00000583438 NUP188Q5SRE5 1749 aa11.78□□□□□ -0.52
PPP4R1-225ENST00000583438 FCHSD2O94868 740 aa11.78□□□□□ -0.52
PPP4R1-225ENST00000583438 VPS72Q15906 364 aa11.78□□□□□ -0.52
PPP4R1-225ENST00000583438 PMFBP1Q8TBY8 1022 aa11.78□□□□□ -0.52
PPP4R1-225ENST00000583438 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
PPP4R1-225ENST00000583438 NRKQ7Z2Y5 1582 aa11.77□□□□□ -0.53
PPP4R1-225ENST00000583438 ONECUT3O60422 494 aaPredicted RBP11.77□□□□□ -0.53
PPP4R1-225ENST00000583438 FECHP22830 423 aa11.77□□□□□ -0.53
PPP4R1-225ENST00000583438 C6orf132Q5T0Z8 1188 aa11.77□□□□□ -0.53
PPP4R1-225ENST00000583438 FAM182BQ5T319 152 aa11.77□□□□□ -0.53
PPP4R1-225ENST00000583438 SIRT1Q96EB6 747 aa11.77□□□□□ -0.53
PPP4R1-225ENST00000583438 HIRIP3Q9BW71 556 aaPredicted RBP11.77□□□□□ -0.53
PPP4R1-225ENST00000583438 PPP4R3BQ5MIZ7 849 aa11.76□□□□□ -0.53
PPP4R1-225ENST00000583438 GNPATO15228 680 aa11.75□□□□□ -0.53
PPP4R1-225ENST00000583438 HIC1Q14526 733 aa11.75□□□□□ -0.53
PPP4R1-225ENST00000583438 KRI1Q8N9T8 703 aaKnown RBP11.75□□□□□ -0.53
PPP4R1-225ENST00000583438 RAB3GAP2Q9H2M9 1393 aa11.75□□□□□ -0.53
PPP4R1-225ENST00000583438 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
PPP4R1-225ENST00000583438 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
PPP4R1-225ENST00000583438 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
PPP4R1-225ENST00000583438 DHX57Q6P158 1386 aaKnown RBP11.74□□□□□ -0.53
PPP4R1-225ENST00000583438 SBF2Q86WG5 1849 aa11.74□□□□□ -0.53
PPP4R1-225ENST00000583438 WNK3Q9BYP7 1800 aa11.74□□□□□ -0.53
PPP4R1-225ENST00000583438 ARHGEF10O15013 1369 aa11.73□□□□□ -0.53
PPP4R1-225ENST00000583438 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-225ENST00000583438 CCDC125Q86Z20 511 aa11.73□□□□□ -0.53
PPP4R1-225ENST00000583438 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-225ENST00000583438 PEAK1Q9H792 1746 aa11.72□□□□□ -0.53
PPP4R1-225ENST00000583438 KRT27Q7Z3Y8 459 aa11.72□□□□□ -0.53
PPP4R1-225ENST00000583438 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
PPP4R1-225ENST00000583438 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
PPP4R1-225ENST00000583438 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
PPP4R1-225ENST00000583438 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
PPP4R1-225ENST00000583438 BTG4Q9NY30 223 aa11.71□□□□□ -0.53
PPP4R1-225ENST00000583438 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
PPP4R1-225ENST00000583438 CAMTA1Q9Y6Y1 1673 aa11.71□□□□□ -0.54
PPP4R1-225ENST00000583438 SPATA31A5Q5VU36 1347 aa11.7□□□□□ -0.54
PPP4R1-225ENST00000583438 SPATA31A7Q8IWB4 1347 aa11.7□□□□□ -0.54
PPP4R1-225ENST00000583438 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
PPP4R1-225ENST00000583438 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 COL18A1P39060 1754 aa11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 PARP4Q9UKK3 1724 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 ERBB3P21860 1342 aa11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 HRCP23327 699 aa11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 EMP3P54852 163 aa11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 PSME1Q06323 249 aa11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 MAP2K5Q13163 448 aa11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 AK7Q96M32 723 aa11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 CCDC9Q9Y3X0 531 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-225ENST00000583438 QRICH2Q9H0J4 1663 aa11.68□□□□□ -0.54
PPP4R1-225ENST00000583438 KIAA0232Q92628 1395 aa11.68□□□□□ -0.54
PPP4R1-225ENST00000583438 LRRC37A3O60309 1634 aa11.68□□□□□ -0.54
PPP4R1-225ENST00000583438 COL9A1P20849 921 aa11.68□□□□□ -0.54
PPP4R1-225ENST00000583438 VARS2Q5ST30 1063 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-225ENST00000583438 PIK3C2AO00443 1686 aa11.68□□□□□ -0.54
PPP4R1-225ENST00000583438 WASLO00401 505 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-225ENST00000583438 IRF6O14896 467 aa11.67□□□□□ -0.54
PPP4R1-225ENST00000583438 CHRNA2Q15822 529 aa11.67□□□□□ -0.54
PPP4R1-225ENST00000583438 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
PPP4R1-225ENST00000583438 POGKQ9P215 609 aa11.66□□□□□ -0.54
PPP4R1-225ENST00000583438 CASZ1Q86V15 1759 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms