RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CCDC146Q8IYE0 955 aa21.69■■□□□ 1.06
CDK5RAP3-228ENST00000583363 RUNDC1Q96C34 613 aa21.69■■□□□ 1.06
CDK5RAP3-228ENST00000583363 NLRP2Q9NX02 1062 aa21.69■■□□□ 1.06
CDK5RAP3-228ENST00000583363 SPATA31A1Q5TZJ5 1347 aa21.69■■□□□ 1.06
CDK5RAP3-228ENST00000583363 DISP2A7MBM2 1401 aa21.69■■□□□ 1.06
CDK5RAP3-228ENST00000583363 LARP1Q6PKG0 1096 aaKnown RBP21.68■■□□□ 1.06
CDK5RAP3-228ENST00000583363 KDRP35968 1356 aa21.67■■□□□ 1.06
CDK5RAP3-228ENST00000583363 PRKAR2BP31323 418 aa21.67■■□□□ 1.06
CDK5RAP3-228ENST00000583363 TOM1L2Q6ZVM7 507 aa21.67■■□□□ 1.06
CDK5RAP3-228ENST00000583363 USHBP1Q8N6Y0 703 aa21.67■■□□□ 1.06
CDK5RAP3-228ENST00000583363 CARD10Q9BWT7 1032 aa21.66■■□□□ 1.06
CDK5RAP3-228ENST00000583363 NCAPD2Q15021 1401 aa21.65■■□□□ 1.06
CDK5RAP3-228ENST00000583363 R3HDM1Q15032 1099 aaKnown RBP21.65■■□□□ 1.06
CDK5RAP3-228ENST00000583363 EZH2Q15910 746 aaKnown RBP21.65■■□□□ 1.06
CDK5RAP3-228ENST00000583363 RGPD2P0DJD1 1756 aa21.64■■□□□ 1.06
CDK5RAP3-228ENST00000583363 PHACTR3Q96KR7 559 aa21.64■■□□□ 1.05
CDK5RAP3-228ENST00000583363 APAF1O14727 1248 aa21.62■■□□□ 1.05
CDK5RAP3-228ENST00000583363 TRIM37O94972 964 aa21.62■■□□□ 1.05
CDK5RAP3-228ENST00000583363 NEFMP07197 916 aa21.61■■□□□ 1.05
CDK5RAP3-228ENST00000583363 FAM196AQ6ZSG2 479 aa21.61■■□□□ 1.05
CDK5RAP3-228ENST00000583363 TCP11L2Q8N4U5 519 aa21.61■■□□□ 1.05
CDK5RAP3-228ENST00000583363 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
CDK5RAP3-228ENST00000583363 CAMKK2Q96RR4 588 aa21.61■■□□□ 1.05
CDK5RAP3-228ENST00000583363 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
CDK5RAP3-228ENST00000583363 CRB1P82279 1406 aa21.61■■□□□ 1.05
CDK5RAP3-228ENST00000583363 HNRNPUQ00839 825 aaKnown RBP eCLIP21.6■■□□□ 1.05
CDK5RAP3-228ENST00000583363 FAM208AQ9UK61 1670 aaKnown RBP21.6■■□□□ 1.05
CDK5RAP3-228ENST00000583363 MAPK8IP3Q9UPT6 1336 aa21.59■■□□□ 1.05
CDK5RAP3-228ENST00000583363 SENP3-EIF4A1A0A087X0R7 540 aa21.58■■□□□ 1.05
CDK5RAP3-228ENST00000583363 TMPOP42166 694 aaKnown RBP21.58■■□□□ 1.05
CDK5RAP3-228ENST00000583363 BARGINQ6ZT62 677 aa21.58■■□□□ 1.05
CDK5RAP3-228ENST00000583363 APBA3O96018 575 aa21.57■■□□□ 1.04
CDK5RAP3-228ENST00000583363 NCBP3Q53F19 620 aaKnown RBP21.57■■□□□ 1.04
CDK5RAP3-228ENST00000583363 RAPGEF4Q8WZA2 1011 aa21.57■■□□□ 1.04
CDK5RAP3-228ENST00000583363 RREB1Q92766 1687 aa21.56■■□□□ 1.04
CDK5RAP3-228ENST00000583363 TATP17735 454 aaPredicted RBP21.56■■□□□ 1.04
CDK5RAP3-228ENST00000583363 NFE2L2Q16236 605 aa21.56■■□□□ 1.04
CDK5RAP3-228ENST00000583363 MTHFSDQ2M296 383 aaKnown RBP21.56■■□□□ 1.04
CDK5RAP3-228ENST00000583363 NGEFQ8N5V2 710 aa21.56■■□□□ 1.04
CDK5RAP3-228ENST00000583363 AMOTQ4VCS5 1084 aa21.55■■□□□ 1.04
CDK5RAP3-228ENST00000583363 PLEKHO1Q53GL0 409 aaPredicted RBP21.55■■□□□ 1.04
CDK5RAP3-228ENST00000583363 THRAP3Q9Y2W1 955 aaKnown RBP21.55■■□□□ 1.04
CDK5RAP3-228ENST00000583363 RRP7AQ9Y3A4 280 aaKnown RBP21.55■■□□□ 1.04
CDK5RAP3-228ENST00000583363 IL2RBP14784 551 aa21.54■■□□□ 1.04
CDK5RAP3-228ENST00000583363 PDE3BQ13370 1112 aa21.54■■□□□ 1.04
CDK5RAP3-228ENST00000583363 SALL2Q9Y467 1007 aaPredicted RBP21.54■■□□□ 1.04
CDK5RAP3-228ENST00000583363 NUP188Q5SRE5 1749 aa21.54■■□□□ 1.04
CDK5RAP3-228ENST00000583363 RIPK4P57078 832 aa21.53■■□□□ 1.04
CDK5RAP3-228ENST00000583363 NEUROD2Q15784 382 aa21.53■■□□□ 1.04
CDK5RAP3-228ENST00000583363 GAS2L2Q8NHY3 880 aa21.53■■□□□ 1.04
CDK5RAP3-228ENST00000583363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.53■■□□□ 1.043e-14■■□□□ 11.9
CDK5RAP3-228ENST00000583363 PLEKHG2Q9H7P9 1386 aa21.52■■□□□ 1.04
CDK5RAP3-228ENST00000583363 CCDC27Q2M243 656 aa21.51■■□□□ 1.03
CDK5RAP3-228ENST00000583363 MEGF6O75095 1541 aa21.5■■□□□ 1.03
CDK5RAP3-228ENST00000583363 PARP4Q9UKK3 1724 aaKnown RBP21.5■■□□□ 1.03
CDK5RAP3-228ENST00000583363 CDCA7Q9BWT1 371 aaPredicted RBP21.5■■□□□ 1.03
CDK5RAP3-228ENST00000583363 TRIM35Q9UPQ4 493 aa21.5■■□□□ 1.03
CDK5RAP3-228ENST00000583363 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
CDK5RAP3-228ENST00000583363 ZBED9Q6R2W3 1325 aa21.49■■□□□ 1.03
CDK5RAP3-228ENST00000583363 ZCRB1Q8TBF4 217 aaKnown RBP21.48■■□□□ 1.03
CDK5RAP3-228ENST00000583363 OVOS2A0A0G2JMS6 1433 aa21.47■■□□□ 1.03
CDK5RAP3-228ENST00000583363 WWC1Q8IX03 1113 aa21.47■■□□□ 1.03
CDK5RAP3-228ENST00000583363 ZNF521Q96K83 1311 aa21.47■■□□□ 1.03
CDK5RAP3-228ENST00000583363 HTATSF1O43719 755 aaKnown RBP21.46■■□□□ 1.03
CDK5RAP3-228ENST00000583363 AKAP4Q5JQC9 854 aa21.46■■□□□ 1.03
CDK5RAP3-228ENST00000583363 ZNF530Q6P9A1 599 aaPredicted RBP21.46■■□□□ 1.03
CDK5RAP3-228ENST00000583363 GNAT3A8MTJ3 354 aa21.45■■□□□ 1.02
CDK5RAP3-228ENST00000583363 LMOD3Q0VAK6 560 aa21.45■■□□□ 1.02
CDK5RAP3-228ENST00000583363 EXOC5O00471 708 aa21.44■■□□□ 1.02
CDK5RAP3-228ENST00000583363 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
CDK5RAP3-228ENST00000583363 CYP27B1O15528 508 aa21.43■■□□□ 1.02
CDK5RAP3-228ENST00000583363 C1orf141Q5JVX7 400 aa21.43■■□□□ 1.02
CDK5RAP3-228ENST00000583363 NBPF14Q5TI25 921 aa21.43■■□□□ 1.02
CDK5RAP3-228ENST00000583363 IFNL2Q8IZJ0 200 aa21.43■■□□□ 1.02
CDK5RAP3-228ENST00000583363 LRRC37A3O60309 1634 aa21.42■■□□□ 1.02
CDK5RAP3-228ENST00000583363 PHKG2P15735 406 aa21.42■■□□□ 1.02
CDK5RAP3-228ENST00000583363 SBF2Q86WG5 1849 aa21.42■■□□□ 1.02
CDK5RAP3-228ENST00000583363 RTF1Q92541 710 aaKnown RBP21.42■■□□□ 1.02
CDK5RAP3-228ENST00000583363 MAP3K5Q99683 1374 aa21.41■■□□□ 1.02
CDK5RAP3-228ENST00000583363 DCTN1Q14203 1278 aa21.41■■□□□ 1.02
CDK5RAP3-228ENST00000583363 IL17REQ8NFR9 667 aa21.41■■□□□ 1.02
CDK5RAP3-228ENST00000583363 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
CDK5RAP3-228ENST00000583363 PCDH11XQ9BZA7 1347 aa21.4■■□□□ 1.02
CDK5RAP3-228ENST00000583363 PCDH11YQ9BZA8 1340 aa21.4■■□□□ 1.02
CDK5RAP3-228ENST00000583363 DDB1Q16531 1140 aa21.4■■□□□ 1.02
CDK5RAP3-228ENST00000583363 MCM10Q7L590 875 aa21.4■■□□□ 1.02
CDK5RAP3-228ENST00000583363 PKD1L3Q7Z443 1732 aa21.39■■□□□ 1.01
CDK5RAP3-228ENST00000583363 GOLGA2Q08379 1002 aa21.39■■□□□ 1.01
CDK5RAP3-228ENST00000583363 NKX1-1Q15270 411 aaPredicted RBP21.39■■□□□ 1.01
CDK5RAP3-228ENST00000583363 DDX54Q8TDD1 881 aaKnown RBP21.39■■□□□ 1.01
CDK5RAP3-228ENST00000583363 THUMPD2Q9BTF0 503 aaKnown RBP21.39■■□□□ 1.01
CDK5RAP3-228ENST00000583363 LGR6Q9HBX8 967 aa21.39■■□□□ 1.01
CDK5RAP3-228ENST00000583363 WNK3Q9BYP7 1800 aa21.39■■□□□ 1.01
CDK5RAP3-228ENST00000583363 RGPD3A6NKT7 1758 aaPredicted RBP21.38■■□□□ 1.01
CDK5RAP3-228ENST00000583363 RGPD4Q7Z3J3 1758 aa21.38■■□□□ 1.01
CDK5RAP3-228ENST00000583363 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
CDK5RAP3-228ENST00000583363 MPRIPQ6WCQ1 1025 aa21.38■■□□□ 1.01
CDK5RAP3-228ENST00000583363 RNMTO43148 476 aaKnown RBP21.37■■□□□ 1.01
CDK5RAP3-228ENST00000583363 CDCA7LQ96GN5 454 aa21.37■■□□□ 1.01
CDK5RAP3-228ENST00000583363 IL16Q14005 1332 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms