RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 SULT6B1Q6IMI4 303 aa32.83■■■□□ 2.85
MIR3960-201ENST00000583311 MARCH10Q8NA82 808 aaPredicted RBP32.83■■■□□ 2.85
MIR3960-201ENST00000583311 CCDC125Q86Z20 511 aa32.82■■■□□ 2.84
MIR3960-201ENST00000583311 UPF1Q92900 1129 aaKnown RBP eCLIP32.82■■■□□ 2.84
MIR3960-201ENST00000583311 KDRP35968 1356 aa32.81■■■□□ 2.84
MIR3960-201ENST00000583311 U2SURPO15042 1029 aaKnown RBP32.8■■■□□ 2.84
MIR3960-201ENST00000583311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.8■■■□□ 2.84
MIR3960-201ENST00000583311 SPG7Q9UQ90 795 aa32.8■■■□□ 2.84
MIR3960-201ENST00000583311 BCL9O00512 1426 aa32.79■■■□□ 2.84
MIR3960-201ENST00000583311 DDX54Q8TDD1 881 aaKnown RBP32.79■■■□□ 2.84
MIR3960-201ENST00000583311 PCDH11XQ9BZA7 1347 aa32.78■■■□□ 2.84
MIR3960-201ENST00000583311 PCDH11YQ9BZA8 1340 aa32.78■■■□□ 2.84
MIR3960-201ENST00000583311 EP400Q96L91 3159 aa32.77■■■□□ 2.84
MIR3960-201ENST00000583311 ANP32CO43423 234 aa32.77■■■□□ 2.84
MIR3960-201ENST00000583311 AEBP1Q8IUX7 1158 aa32.77■■■□□ 2.84
MIR3960-201ENST00000583311 SF3B2Q13435 895 aaKnown RBP32.76■■■□□ 2.83
MIR3960-201ENST00000583311 PKD1L3Q7Z443 1732 aa32.76■■■□□ 2.83
MIR3960-201ENST00000583311 HMOX1P09601 288 aa32.73■■■□□ 2.83
MIR3960-201ENST00000583311 AMOTQ4VCS5 1084 aa32.73■■■□□ 2.83
MIR3960-201ENST00000583311 PLEKHO1Q53GL0 409 aaPredicted RBP32.73■■■□□ 2.83
MIR3960-201ENST00000583311 SHANK3Q9BYB0 1731 aa32.73■■■□□ 2.83
MIR3960-201ENST00000583311 U2AF1L5P0DN76 240 aaPredicted RBP32.7■■■□□ 2.83
MIR3960-201ENST00000583311 U2AF1Q01081 240 aaKnown RBP eCLIP32.7■■■□□ 2.83
MIR3960-201ENST00000583311 TRIM37O94972 964 aa32.69■■■□□ 2.82
MIR3960-201ENST00000583311 CYP27B1O15528 508 aa32.66■■■□□ 2.82
MIR3960-201ENST00000583311 IFNL2Q8IZJ0 200 aa32.66■■■□□ 2.82
MIR3960-201ENST00000583311 SBF2Q86WG5 1849 aa32.64■■■□□ 2.82
MIR3960-201ENST00000583311 BCL11BQ9C0K0 894 aaPredicted RBP32.64■■■□□ 2.82
MIR3960-201ENST00000583311 FCHSD2O94868 740 aa32.63■■■□□ 2.81
MIR3960-201ENST00000583311 PHKG2P15735 406 aa32.62■■■□□ 2.81
MIR3960-201ENST00000583311 BAG6P46379 1132 aa32.62■■■□□ 2.81
MIR3960-201ENST00000583311 ZNF530Q6P9A1 599 aaPredicted RBP32.62■■■□□ 2.81
MIR3960-201ENST00000583311 TNS1Q9HBL0 1735 aaKnown RBP32.61■■■□□ 2.81
MIR3960-201ENST00000583311 HSP90AB1P08238 724 aaKnown RBP32.61■■■□□ 2.81
MIR3960-201ENST00000583311 NKX1-1Q15270 411 aaPredicted RBP32.61■■■□□ 2.81
MIR3960-201ENST00000583311 C1orf141Q5JVX7 400 aa32.61■■■□□ 2.81
MIR3960-201ENST00000583311 ACSBG1Q96GR2 724 aa32.61■■■□□ 2.81
MIR3960-201ENST00000583311 RSPH6AQ9H0K4 717 aa32.61■■■□□ 2.81
MIR3960-201ENST00000583311 NHSQ6T4R5 1651 aa32.6■■■□□ 2.81
MIR3960-201ENST00000583311 PNNQ9H307 717 aaKnown RBP32.6■■■□□ 2.81
MIR3960-201ENST00000583311 PRKAR2BP31323 418 aa32.59■■■□□ 2.81
MIR3960-201ENST00000583311 APBA3O96018 575 aa32.58■■■□□ 2.81
MIR3960-201ENST00000583311 NEFMP07197 916 aa32.58■■■□□ 2.81
MIR3960-201ENST00000583311 DOT1LQ8TEK3 1739 aa32.57■■■□□ 2.8
MIR3960-201ENST00000583311 WDR43Q15061 677 aaKnown RBP eCLIP32.56■■■□□ 2.8
MIR3960-201ENST00000583311 AKAP4Q5JQC9 854 aa32.55■■■□□ 2.8
MIR3960-201ENST00000583311 GAS2L2Q8NHY3 880 aa32.55■■■□□ 2.8
MIR3960-201ENST00000583311 SYTL4Q96C24 671 aaPredicted RBP32.55■■■□□ 2.8
MIR3960-201ENST00000583311 KCNQ2O43526 872 aa32.54■■■□□ 2.8
MIR3960-201ENST00000583311 DCAF5Q96JK2 942 aa32.54■■■□□ 2.8
MIR3960-201ENST00000583311 PRIM1P49642 420 aaKnown RBP32.53■■■□□ 2.8
MIR3960-201ENST00000583311 MTHFSDQ2M296 383 aaKnown RBP32.53■■■□□ 2.8
MIR3960-201ENST00000583311 DEFB132Q7Z7B7 95 aa32.51■■■□□ 2.79
MIR3960-201ENST00000583311 KAT6BQ8WYB5 2073 aa32.49■■■□□ 2.79
MIR3960-201ENST00000583311 PLSCR1O15162 318 aa32.49■■■□□ 2.79
MIR3960-201ENST00000583311 PTF1AQ7RTS3 328 aa32.49■■■□□ 2.79
MIR3960-201ENST00000583311 EN1Q05925 392 aaPredicted RBP32.48■■■□□ 2.79
MIR3960-201ENST00000583311 ERVV-2B6SEH9 535 aa32.47■■■□□ 2.79
MIR3960-201ENST00000583311 PHACTR3Q96KR7 559 aa32.47■■■□□ 2.79
MIR3960-201ENST00000583311 MAPK8IP3Q9UPT6 1336 aa32.47■■■□□ 2.79
MIR3960-201ENST00000583311 TOGARAM1Q9Y4F4 1720 aa32.46■■■□□ 2.79
MIR3960-201ENST00000583311 BTAF1O14981 1849 aa32.46■■■□□ 2.79
MIR3960-201ENST00000583311 MPRIPQ6WCQ1 1025 aa32.45■■■□□ 2.79
MIR3960-201ENST00000583311 TMOD3Q9NYL9 352 aa32.45■■■□□ 2.79
MIR3960-201ENST00000583311 RGPD3A6NKT7 1758 aaPredicted RBP32.45■■■□□ 2.78
MIR3960-201ENST00000583311 RGPD4Q7Z3J3 1758 aa32.45■■■□□ 2.78
MIR3960-201ENST00000583311 MRS2Q9HD23 443 aa32.44■■■□□ 2.78
MIR3960-201ENST00000583311 MAP3K5Q99683 1374 aa32.44■■■□□ 2.78
MIR3960-201ENST00000583311 KDM6AO15550 1401 aaPredicted RBP32.43■■■□□ 2.78
MIR3960-201ENST00000583311 GNAT3A8MTJ3 354 aa32.43■■■□□ 2.78
MIR3960-201ENST00000583311 CAMKK2Q96RR4 588 aa32.43■■■□□ 2.78
MIR3960-201ENST00000583311 PLEKHF1Q96S99 279 aa32.43■■■□□ 2.78
MIR3960-201ENST00000583311 EZH2Q15910 746 aaKnown RBP32.41■■■□□ 2.78
MIR3960-201ENST00000583311 ADAMTS8Q9UP79 889 aa32.41■■■□□ 2.78
MIR3960-201ENST00000583311 ITGB4P16144 1822 aa32.41■■■□□ 2.78
MIR3960-201ENST00000583311 CABP4P57796 275 aa32.4■■■□□ 2.78
MIR3960-201ENST00000583311 DIEXFQ68CQ4 756 aaKnown RBP32.39■■■□□ 2.78
MIR3960-201ENST00000583311 SCN11AQ9UI33 1791 aa32.38■■■□□ 2.77
MIR3960-201ENST00000583311 CCDC184Q52MB2 194 aa32.38■■■□□ 2.77
MIR3960-201ENST00000583311 PIGBQ92521 554 aa32.38■■■□□ 2.77
MIR3960-201ENST00000583311 RNMTO43148 476 aaKnown RBP32.37■■■□□ 2.77
MIR3960-201ENST00000583311 RTF1Q92541 710 aaKnown RBP32.37■■■□□ 2.77
MIR3960-201ENST00000583311 SMARCC1Q92922 1105 aaPredicted RBP32.37■■■□□ 2.77
MIR3960-201ENST00000583311 RUNDC1Q96C34 613 aa32.36■■■□□ 2.77
MIR3960-201ENST00000583311 NFE2L2Q16236 605 aa32.35■■■□□ 2.77
MIR3960-201ENST00000583311 ADAMTS7Q9UKP4 1686 aa32.34■■■□□ 2.77
MIR3960-201ENST00000583311 HTATSF1O43719 755 aaKnown RBP32.34■■■□□ 2.77
MIR3960-201ENST00000583311 LGR6Q9HBX8 967 aa32.34■■■□□ 2.77
MIR3960-201ENST00000583311 TXNRD1Q16881 649 aa32.33■■■□□ 2.77
MIR3960-201ENST00000583311 RREB1Q92766 1687 aa32.33■■■□□ 2.77
MIR3960-201ENST00000583311 CCDC146Q8IYE0 955 aa32.32■■■□□ 2.76
MIR3960-201ENST00000583311 PNISRQ8TF01 805 aaKnown RBP32.32■■■□□ 2.76
MIR3960-201ENST00000583311 SLC52A2Q9HAB3 445 aa32.32■■■□□ 2.76
MIR3960-201ENST00000583311 MRC1P22897 1456 aa32.31■■■□□ 2.76
MIR3960-201ENST00000583311 NFATC2IPQ8NCF5 419 aa32.31■■■□□ 2.76
MIR3960-201ENST00000583311 VIRMAQ69YN4 1812 aaKnown RBP32.3■■■□□ 2.76
MIR3960-201ENST00000583311 TEFQ10587 303 aa32.3■■■□□ 2.76
MIR3960-201ENST00000583311 SLC27A3Q5K4L6 730 aa32.3■■■□□ 2.76
MIR3960-201ENST00000583311 PALLDQ8WX93 1383 aa32.3■■■□□ 2.76
MIR3960-201ENST00000583311 HMGB2P26583 209 aaKnown RBP32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms