RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ZCRB1Q8TBF4 217 aaKnown RBP17.11■□□□□ 0.33
SMARCE1-218ENST00000582955 EYA1Q99502 592 aa17.11■□□□□ 0.33
SMARCE1-218ENST00000582955 BCL9O00512 1426 aa17.11■□□□□ 0.33
SMARCE1-218ENST00000582955 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
SMARCE1-218ENST00000582955 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
SMARCE1-218ENST00000582955 ACSBG1Q96GR2 724 aa17.09■□□□□ 0.33
SMARCE1-218ENST00000582955 BCL11BQ9C0K0 894 aaPredicted RBP17.09■□□□□ 0.33
SMARCE1-218ENST00000582955 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
SMARCE1-218ENST00000582955 MTHFSP49914 203 aa17.08■□□□□ 0.32
SMARCE1-218ENST00000582955 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.32
SMARCE1-218ENST00000582955 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
SMARCE1-218ENST00000582955 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
SMARCE1-218ENST00000582955 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
SMARCE1-218ENST00000582955 KCNQ2O43526 872 aa17.06■□□□□ 0.32
SMARCE1-218ENST00000582955 NHSQ6T4R5 1651 aa17.06■□□□□ 0.32
SMARCE1-218ENST00000582955 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
SMARCE1-218ENST00000582955 PCDH11XQ9BZA7 1347 aa17.05■□□□□ 0.32
SMARCE1-218ENST00000582955 PCDH11YQ9BZA8 1340 aa17.05■□□□□ 0.32
SMARCE1-218ENST00000582955 SPG7Q9UQ90 795 aa17.04■□□□□ 0.32
SMARCE1-218ENST00000582955 KAT6BQ8WYB5 2073 aa17.03■□□□□ 0.32
SMARCE1-218ENST00000582955 IL13P35225 146 aa17.03■□□□□ 0.32
SMARCE1-218ENST00000582955 SYTL4Q96C24 671 aaPredicted RBP17.03■□□□□ 0.32
SMARCE1-218ENST00000582955 PKD1L3Q7Z443 1732 aa17.02■□□□□ 0.32
SMARCE1-218ENST00000582955 PLSCR1O15162 318 aa17.02■□□□□ 0.32
SMARCE1-218ENST00000582955 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
SMARCE1-218ENST00000582955 RREB1Q92766 1687 aa17.01■□□□□ 0.31
SMARCE1-218ENST00000582955 DDX10Q13206 875 aaKnown RBP17.01■□□□□ 0.31
SMARCE1-218ENST00000582955 SULT6B1Q6IMI4 303 aa17.01■□□□□ 0.31
SMARCE1-218ENST00000582955 CYP27B1O15528 508 aa17■□□□□ 0.31
SMARCE1-218ENST00000582955 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
SMARCE1-218ENST00000582955 PRIM1P49642 420 aaKnown RBP17■□□□□ 0.31
SMARCE1-218ENST00000582955 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
SMARCE1-218ENST00000582955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.312e-7■■■□□ 14.8
SMARCE1-218ENST00000582955 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
SMARCE1-218ENST00000582955 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
SMARCE1-218ENST00000582955 NUP188Q5SRE5 1749 aa16.99■□□□□ 0.31
SMARCE1-218ENST00000582955 BTAF1O14981 1849 aa16.99■□□□□ 0.31
SMARCE1-218ENST00000582955 PSDA5PKW4 1024 aaPredicted RBP16.98■□□□□ 0.31
SMARCE1-218ENST00000582955 PPP2R1AP30153 589 aa16.98■□□□□ 0.31
SMARCE1-218ENST00000582955 CFAP53Q96M91 514 aa16.98■□□□□ 0.31
SMARCE1-218ENST00000582955 HMOX1P09601 288 aa16.97■□□□□ 0.31
SMARCE1-218ENST00000582955 TXNRD1Q16881 649 aa16.97■□□□□ 0.31
SMARCE1-218ENST00000582955 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
SMARCE1-218ENST00000582955 NBPF14Q5TI25 921 aa16.97■□□□□ 0.31
SMARCE1-218ENST00000582955 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
SMARCE1-218ENST00000582955 COL3A1P02461 1466 aaPredicted RBP16.97■□□□□ 0.31
SMARCE1-218ENST00000582955 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.31
SMARCE1-218ENST00000582955 R3HDM1Q15032 1099 aaKnown RBP16.96■□□□□ 0.31
SMARCE1-218ENST00000582955 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
SMARCE1-218ENST00000582955 KDRP35968 1356 aa16.96■□□□□ 0.31
SMARCE1-218ENST00000582955 PHKG2P15735 406 aa16.95■□□□□ 0.3
SMARCE1-218ENST00000582955 AMOTQ4VCS5 1084 aa16.95■□□□□ 0.3
SMARCE1-218ENST00000582955 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
SMARCE1-218ENST00000582955 MPRIPQ6WCQ1 1025 aa16.94■□□□□ 0.3
SMARCE1-218ENST00000582955 PROM2Q8N271 834 aa16.94■□□□□ 0.3
SMARCE1-218ENST00000582955 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
SMARCE1-218ENST00000582955 NKX1-1Q15270 411 aaPredicted RBP16.93■□□□□ 0.3
SMARCE1-218ENST00000582955 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
SMARCE1-218ENST00000582955 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
SMARCE1-218ENST00000582955 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
SMARCE1-218ENST00000582955 ANO8Q9HCE9 1232 aaPredicted RBP16.9■□□□□ 0.3
SMARCE1-218ENST00000582955 TMOD3Q9NYL9 352 aa16.9■□□□□ 0.3
SMARCE1-218ENST00000582955 ITGB4P16144 1822 aa16.89■□□□□ 0.29
SMARCE1-218ENST00000582955 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
SMARCE1-218ENST00000582955 STK32BQ9NY57 414 aa16.89■□□□□ 0.29
SMARCE1-218ENST00000582955 RALBP1Q15311 655 aa16.88■□□□□ 0.29
SMARCE1-218ENST00000582955 SLC27A3Q5K4L6 730 aa16.88■□□□□ 0.29
SMARCE1-218ENST00000582955 PIGBQ92521 554 aa16.88■□□□□ 0.29
SMARCE1-218ENST00000582955 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
SMARCE1-218ENST00000582955 U2AF1L5P0DN76 240 aaPredicted RBP16.87■□□□□ 0.29
SMARCE1-218ENST00000582955 KCNQ4P56696 695 aa16.87■□□□□ 0.29
SMARCE1-218ENST00000582955 U2AF1Q01081 240 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMARCE1-218ENST00000582955 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
SMARCE1-218ENST00000582955 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
SMARCE1-218ENST00000582955 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
SMARCE1-218ENST00000582955 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
SMARCE1-218ENST00000582955 AKAP4Q5JQC9 854 aa16.86■□□□□ 0.29
SMARCE1-218ENST00000582955 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
SMARCE1-218ENST00000582955 LY75O60449 1722 aa16.86■□□□□ 0.29
SMARCE1-218ENST00000582955 ERVV-2B6SEH9 535 aa16.85■□□□□ 0.29
SMARCE1-218ENST00000582955 CABP4P57796 275 aa16.85■□□□□ 0.29
SMARCE1-218ENST00000582955 SLC15A2Q16348 729 aa16.85■□□□□ 0.29
SMARCE1-218ENST00000582955 MTHFSDQ2M296 383 aaKnown RBP16.85■□□□□ 0.29
SMARCE1-218ENST00000582955 PAPPAQ13219 1627 aa16.85■□□□□ 0.29
SMARCE1-218ENST00000582955 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
SMARCE1-218ENST00000582955 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
SMARCE1-218ENST00000582955 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
SMARCE1-218ENST00000582955 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
SMARCE1-218ENST00000582955 ZNF827Q17R98 1081 aa16.82■□□□□ 0.28
SMARCE1-218ENST00000582955 GAS2L2Q8NHY3 880 aa16.82■□□□□ 0.28
SMARCE1-218ENST00000582955 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
SMARCE1-218ENST00000582955 SRCAPQ6ZRS2 3230 aa16.81■□□□□ 0.28
SMARCE1-218ENST00000582955 SCN11AQ9UI33 1791 aa16.8■□□□□ 0.28
SMARCE1-218ENST00000582955 FCHSD2O94868 740 aa16.8■□□□□ 0.28
SMARCE1-218ENST00000582955 NFATC2IPQ8NCF5 419 aa16.8■□□□□ 0.28
SMARCE1-218ENST00000582955 AKT1S1Q96B36 256 aa16.8■□□□□ 0.28
SMARCE1-218ENST00000582955 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
SMARCE1-218ENST00000582955 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
SMARCE1-218ENST00000582955 LOC102724428A0A0B4J2F2 783 aa16.79■□□□□ 0.28
SMARCE1-218ENST00000582955 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms