RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 GPBP1L1Q9HC44 474 aaPredicted RBP21.74■■□□□ 1.07
IFT20-212ENST00000582797 CD163L1Q9NR16 1453 aa21.74■■□□□ 1.07
IFT20-212ENST00000582797 ANKRD36BQ8N2N9 1353 aa21.74■■□□□ 1.07
IFT20-212ENST00000582797 PRIM1P49642 420 aaKnown RBP21.73■■□□□ 1.07
IFT20-212ENST00000582797 COL23A1Q86Y22 540 aaPredicted RBP21.73■■□□□ 1.07
IFT20-212ENST00000582797 ADCY9O60503 1353 aa21.73■■□□□ 1.07
IFT20-212ENST00000582797 SBNO2Q9Y2G9 1366 aa21.73■■□□□ 1.07
IFT20-212ENST00000582797 TAF1LQ8IZX4 1826 aa21.71■■□□□ 1.07
IFT20-212ENST00000582797 CCNL1Q9UK58 526 aaPredicted RBP21.7■■□□□ 1.06
IFT20-212ENST00000582797 LTV1Q96GA3 475 aaPredicted RBP21.69■■□□□ 1.06
IFT20-212ENST00000582797 L3MBTL2Q969R5 705 aa21.67■■□□□ 1.06
IFT20-212ENST00000582797 ROCK2O75116 1388 aaKnown RBP21.66■■□□□ 1.06
IFT20-212ENST00000582797 MEGF6O75095 1541 aa21.65■■□□□ 1.06
IFT20-212ENST00000582797 CD2APQ9Y5K6 639 aa21.65■■□□□ 1.06
IFT20-212ENST00000582797 TOGARAM1Q9Y4F4 1720 aa21.64■■□□□ 1.06
IFT20-212ENST00000582797 IP6K1Q92551 441 aa21.64■■□□□ 1.05
IFT20-212ENST00000582797 WWC3Q9ULE0 1092 aa21.64■■□□□ 1.05
IFT20-212ENST00000582797 EDC4Q6P2E9 1401 aaKnown RBP21.63■■□□□ 1.05
IFT20-212ENST00000582797 USP47Q96K76 1375 aa21.62■■□□□ 1.05
IFT20-212ENST00000582797 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
IFT20-212ENST00000582797 ZCRB1Q8TBF4 217 aaKnown RBP21.61■■□□□ 1.05
IFT20-212ENST00000582797 C4BP0C0L5 1744 aa21.6■■□□□ 1.05
IFT20-212ENST00000582797 UBR3Q6ZT12 1888 aa21.6■■□□□ 1.05
IFT20-212ENST00000582797 KIF3CO14782 793 aa21.59■■□□□ 1.05
IFT20-212ENST00000582797 SLC12A5Q9H2X9 1139 aa21.59■■□□□ 1.05
IFT20-212ENST00000582797 A0A1W2PP64 1363 aa21.59■■□□□ 1.05
IFT20-212ENST00000582797 ITGB4P16144 1822 aa21.58■■□□□ 1.05
IFT20-212ENST00000582797 HDGFL2Q7Z4V5 671 aaPredicted RBP21.58■■□□□ 1.05
IFT20-212ENST00000582797 IGSF1Q8N6C5 1336 aa21.57■■□□□ 1.04
IFT20-212ENST00000582797 MAP3K19Q56UN5 1328 aa21.55■■□□□ 1.04
IFT20-212ENST00000582797 FBLN1P23142 703 aa21.55■■□□□ 1.04
IFT20-212ENST00000582797 HOXC9P31274 260 aa21.55■■□□□ 1.04
IFT20-212ENST00000582797 AMIGO3Q86WK7 504 aa21.55■■□□□ 1.04
IFT20-212ENST00000582797 CICQ96RK0 1608 aaPredicted RBP21.55■■□□□ 1.04
IFT20-212ENST00000582797 PALLDQ8WX93 1383 aa21.53■■□□□ 1.04
IFT20-212ENST00000582797 SMIM5Q71RC9 77 aa21.53■■□□□ 1.04
IFT20-212ENST00000582797 FLAD1Q8NFF5 587 aa21.53■■□□□ 1.04
IFT20-212ENST00000582797 WDR90Q96KV7 1748 aa21.52■■□□□ 1.04
IFT20-212ENST00000582797 KIAA1551Q9HCM1 1747 aa21.52■■□□□ 1.04
IFT20-212ENST00000582797 USHBP1Q8N6Y0 703 aa21.52■■□□□ 1.04
IFT20-212ENST00000582797 SIN3AQ96ST3 1273 aa21.52■■□□□ 1.04
IFT20-212ENST00000582797 N4BP2Q86UW6 1770 aaPredicted RBP21.51■■□□□ 1.03
IFT20-212ENST00000582797 AMPHP49418 695 aa21.51■■□□□ 1.03
IFT20-212ENST00000582797 APLP1P51693 650 aa21.51■■□□□ 1.03
IFT20-212ENST00000582797 TERF2IPQ9NYB0 399 aa21.51■■□□□ 1.03
IFT20-212ENST00000582797 NBPF6Q5VWK0 638 aa21.5■■□□□ 1.03
IFT20-212ENST00000582797 DNAJC5GQ8N7S2 189 aa21.5■■□□□ 1.03
IFT20-212ENST00000582797 NBPF4Q96M43 638 aa21.5■■□□□ 1.03
IFT20-212ENST00000582797 PHF14O94880 888 aa21.49■■□□□ 1.03
IFT20-212ENST00000582797 MAP2P11137 1827 aaKnown RBP21.49■■□□□ 1.03
IFT20-212ENST00000582797 KIF13BQ9NQT8 1826 aa21.49■■□□□ 1.03
IFT20-212ENST00000582797 MPRIPQ6WCQ1 1025 aa21.48■■□□□ 1.03
IFT20-212ENST00000582797 AK7Q96M32 723 aa21.48■■□□□ 1.03
IFT20-212ENST00000582797 COG3Q96JB2 828 aa21.47■■□□□ 1.03
IFT20-212ENST00000582797 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.46■■□□□ 1.03
IFT20-212ENST00000582797 NEUROD1Q13562 356 aa21.45■■□□□ 1.02
IFT20-212ENST00000582797 RAPGEF4Q8WZA2 1011 aa21.45■■□□□ 1.02
IFT20-212ENST00000582797 CGNL1Q0VF96 1302 aa21.45■■□□□ 1.02
IFT20-212ENST00000582797 RTL1A6NKG5 1358 aa21.45■■□□□ 1.02
IFT20-212ENST00000582797 PKD1L3Q7Z443 1732 aa21.44■■□□□ 1.02
IFT20-212ENST00000582797 TOMM70O94826 608 aa21.44■■□□□ 1.02
IFT20-212ENST00000582797 TATP17735 454 aaPredicted RBP21.43■■□□□ 1.02
IFT20-212ENST00000582797 RRS1Q15050 365 aaKnown RBP21.43■■□□□ 1.02
IFT20-212ENST00000582797 PCDH11XQ9BZA7 1347 aa21.43■■□□□ 1.02
IFT20-212ENST00000582797 PCDH11YQ9BZA8 1340 aa21.43■■□□□ 1.02
IFT20-212ENST00000582797 PXDNLA1KZ92 1463 aa21.43■■□□□ 1.02
IFT20-212ENST00000582797 BRCA1P38398 1863 aaKnown RBP21.42■■□□□ 1.02
IFT20-212ENST00000582797 CARD11Q9BXL7 1154 aa21.42■■□□□ 1.02
IFT20-212ENST00000582797 SMG6Q86US8 1419 aaKnown RBP21.41■■□□□ 1.02
IFT20-212ENST00000582797 NSD3Q9BZ95 1437 aa21.41■■□□□ 1.02
IFT20-212ENST00000582797 NMRK2Q9NPI5 230 aa21.41■■□□□ 1.02
IFT20-212ENST00000582797 PCNTO95613 3336 aa21.4■■□□□ 1.02
IFT20-212ENST00000582797 CYP27B1O15528 508 aa21.4■■□□□ 1.02
IFT20-212ENST00000582797 CAPN15O75808 1086 aa21.39■■□□□ 1.01
IFT20-212ENST00000582797 HMGB2P26583 209 aaKnown RBP21.39■■□□□ 1.01
IFT20-212ENST00000582797 HTRA3P83110 453 aa21.39■■□□□ 1.01
IFT20-212ENST00000582797 COL13A1Q5TAT6 717 aaPredicted RBP21.39■■□□□ 1.01
IFT20-212ENST00000582797 LINC00116Q8NCU8 138 aa21.39■■□□□ 1.01
IFT20-212ENST00000582797 SMARCC1Q92922 1105 aaPredicted RBP21.39■■□□□ 1.01
IFT20-212ENST00000582797 SSFA2P28290 1259 aa21.38■■□□□ 1.01
IFT20-212ENST00000582797 KIF20BQ96Q89 1820 aa21.38■■□□□ 1.01
IFT20-212ENST00000582797 PIGBQ92521 554 aa21.37■■□□□ 1.01
IFT20-212ENST00000582797 BCS1LQ9Y276 419 aa21.36■■□□□ 1.01
IFT20-212ENST00000582797 ARFGEF1Q9Y6D6 1849 aa21.36■■□□□ 1.01
IFT20-212ENST00000582797 MMP10P09238 476 aa21.35■■□□□ 1.01
IFT20-212ENST00000582797 HSP90AB2PQ58FF8 381 aa21.35■■□□□ 1.01
IFT20-212ENST00000582797 PUS7Q96PZ0 661 aaKnown RBP21.35■■□□□ 1.01
IFT20-212ENST00000582797 LOC102724428A0A0B4J2F2 783 aa21.34■■□□□ 1.01
IFT20-212ENST00000582797 A0A0G2JLW4 131 aa21.34■■□□□ 1.01
IFT20-212ENST00000582797 GNPATO15228 680 aa21.34■■□□□ 1.01
IFT20-212ENST00000582797 SIK1P57059 783 aa21.34■■□□□ 1.01
IFT20-212ENST00000582797 ARHGAP27Q6ZUM4 889 aa21.34■■□□□ 1.01
IFT20-212ENST00000582797 INSRP06213 1382 aa21.34■■□□□ 1.01
IFT20-212ENST00000582797 C4AP0C0L4 1744 aa21.33■■□□□ 1.01
IFT20-212ENST00000582797 ITPK1Q13572 414 aa21.33■■□□□ 1.01
IFT20-212ENST00000582797 KLRG1Q96E93 195 aa21.33■■□□□ 1.01
IFT20-212ENST00000582797 GGNBP2Q9H3C7 697 aa21.33■■□□□ 1.01
IFT20-212ENST00000582797 C10orf71Q711Q0 1435 aa21.32■■□□□ 1
IFT20-212ENST00000582797 RBM46Q8TBY0 533 aaKnown RBP21.31■■□□□ 1
IFT20-212ENST00000582797 FYB1O15117 783 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms