RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 CENPJQ9HC77 1338 aaPredicted RBP12.27□□□□□ -0.45
PDLIM1P3-201ENST00000582370 DNAJC5GQ8N7S2 189 aa12.26□□□□□ -0.45
PDLIM1P3-201ENST00000582370 TTC21BQ7Z4L5 1316 aa12.26□□□□□ -0.45
PDLIM1P3-201ENST00000582370 SOX12O15370 315 aa12.25□□□□□ -0.45
PDLIM1P3-201ENST00000582370 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
PDLIM1P3-201ENST00000582370 PCNTO95613 3336 aa12.25□□□□□ -0.45
PDLIM1P3-201ENST00000582370 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
PDLIM1P3-201ENST00000582370 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
PDLIM1P3-201ENST00000582370 MSH5O43196 834 aa12.23□□□□□ -0.45
PDLIM1P3-201ENST00000582370 TOMM70O94826 608 aa12.23□□□□□ -0.45
PDLIM1P3-201ENST00000582370 PRELPP51888 382 aa12.23□□□□□ -0.45
PDLIM1P3-201ENST00000582370 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
PDLIM1P3-201ENST00000582370 NSD2O96028 1365 aa12.22□□□□□ -0.45
PDLIM1P3-201ENST00000582370 COL13A1Q5TAT6 717 aaPredicted RBP12.22□□□□□ -0.45
PDLIM1P3-201ENST00000582370 CCNL1Q9UK58 526 aaPredicted RBP12.22□□□□□ -0.45
PDLIM1P3-201ENST00000582370 UBR3Q6ZT12 1888 aa12.22□□□□□ -0.45
PDLIM1P3-201ENST00000582370 KIF13BQ9NQT8 1826 aa12.22□□□□□ -0.45
PDLIM1P3-201ENST00000582370 TOGARAM1Q9Y4F4 1720 aa12.22□□□□□ -0.45
PDLIM1P3-201ENST00000582370 ROCK2O75116 1388 aaKnown RBP12.21□□□□□ -0.45
PDLIM1P3-201ENST00000582370 CAPN15O75808 1086 aa12.21□□□□□ -0.45
PDLIM1P3-201ENST00000582370 KCNQ4P56696 695 aa12.21□□□□□ -0.45
PDLIM1P3-201ENST00000582370 MSL1Q68DK7 614 aa12.21□□□□□ -0.45
PDLIM1P3-201ENST00000582370 JMYQ8N9B5 988 aa12.21□□□□□ -0.45
PDLIM1P3-201ENST00000582370 USP31Q70CQ4 1352 aa12.2□□□□□ -0.46
PDLIM1P3-201ENST00000582370 IGSF1Q8N6C5 1336 aa12.2□□□□□ -0.46
PDLIM1P3-201ENST00000582370 HMGB2P26583 209 aaKnown RBP12.2□□□□□ -0.46
PDLIM1P3-201ENST00000582370 TNS4Q8IZW8 715 aa12.2□□□□□ -0.46
PDLIM1P3-201ENST00000582370 SYTL4Q96C24 671 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1P3-201ENST00000582370 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
PDLIM1P3-201ENST00000582370 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
PDLIM1P3-201ENST00000582370 PKD1L3Q7Z443 1732 aa12.2□□□□□ -0.46
PDLIM1P3-201ENST00000582370 KIAA1551Q9HCM1 1747 aa12.2□□□□□ -0.46
PDLIM1P3-201ENST00000582370 EVC2Q86UK5 1308 aa12.19□□□□□ -0.46
PDLIM1P3-201ENST00000582370 FLAD1Q8NFF5 587 aa12.19□□□□□ -0.46
PDLIM1P3-201ENST00000582370 DDX54Q8TDD1 881 aaKnown RBP12.19□□□□□ -0.46
PDLIM1P3-201ENST00000582370 ANKRD24Q8TF21 1146 aa12.19□□□□□ -0.46
PDLIM1P3-201ENST00000582370 KLRG1Q96E93 195 aa12.19□□□□□ -0.46
PDLIM1P3-201ENST00000582370 BRCA1P38398 1863 aaKnown RBP12.19□□□□□ -0.46
PDLIM1P3-201ENST00000582370 KTN1Q86UP2 1357 aaKnown RBP12.18□□□□□ -0.46
PDLIM1P3-201ENST00000582370 USP47Q96K76 1375 aa12.18□□□□□ -0.46
PDLIM1P3-201ENST00000582370 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
PDLIM1P3-201ENST00000582370 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
PDLIM1P3-201ENST00000582370 TNRC6CQ9HCJ0 1690 aaKnown RBP12.17□□□□□ -0.46
PDLIM1P3-201ENST00000582370 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.46
PDLIM1P3-201ENST00000582370 CARD11Q9BXL7 1154 aa12.17□□□□□ -0.46
PDLIM1P3-201ENST00000582370 N4BP2Q86UW6 1770 aaPredicted RBP12.17□□□□□ -0.46
PDLIM1P3-201ENST00000582370 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
PDLIM1P3-201ENST00000582370 RBM46Q8TBY0 533 aaKnown RBP12.16□□□□□ -0.46
PDLIM1P3-201ENST00000582370 NSD3Q9BZ95 1437 aa12.16□□□□□ -0.46
PDLIM1P3-201ENST00000582370 ITGB4P16144 1822 aa12.16□□□□□ -0.46
PDLIM1P3-201ENST00000582370 FSTL1Q12841 308 aa12.13□□□□□ -0.47
PDLIM1P3-201ENST00000582370 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
PDLIM1P3-201ENST00000582370 PLEKHG2Q9H7P9 1386 aa12.13□□□□□ -0.47
PDLIM1P3-201ENST00000582370 SBNO2Q9Y2G9 1366 aa12.13□□□□□ -0.47
PDLIM1P3-201ENST00000582370 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
PDLIM1P3-201ENST00000582370 MEGF6O75095 1541 aa12.12□□□□□ -0.47
PDLIM1P3-201ENST00000582370 SLC34A2O95436 690 aa12.12□□□□□ -0.47
PDLIM1P3-201ENST00000582370 CDCA8Q53HL2 280 aa12.12□□□□□ -0.47
PDLIM1P3-201ENST00000582370 C16orf71Q8IYS4 520 aaPredicted RBP12.12□□□□□ -0.47
PDLIM1P3-201ENST00000582370 NMRK2Q9NPI5 230 aa12.12□□□□□ -0.47
PDLIM1P3-201ENST00000582370 PXDNLA1KZ92 1463 aa12.12□□□□□ -0.47
PDLIM1P3-201ENST00000582370 MAP2P11137 1827 aaKnown RBP12.11□□□□□ -0.47
PDLIM1P3-201ENST00000582370 ZCRB1Q8TBF4 217 aaKnown RBP12.11□□□□□ -0.47
PDLIM1P3-201ENST00000582370 CD163L1Q9NR16 1453 aa12.1□□□□□ -0.47
PDLIM1P3-201ENST00000582370 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
PDLIM1P3-201ENST00000582370 HTRA3P83110 453 aa12.1□□□□□ -0.47
PDLIM1P3-201ENST00000582370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDLIM1P3-201ENST00000582370 IP6K1Q92551 441 aa12.1□□□□□ -0.47
PDLIM1P3-201ENST00000582370 SBF1O95248 1867 aa12.09□□□□□ -0.47
PDLIM1P3-201ENST00000582370 NME9Q86XW9 330 aa12.09□□□□□ -0.47
PDLIM1P3-201ENST00000582370 AK7Q96M32 723 aa12.09□□□□□ -0.47
PDLIM1P3-201ENST00000582370 EDC4Q6P2E9 1401 aaKnown RBP12.09□□□□□ -0.47
PDLIM1P3-201ENST00000582370 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
PDLIM1P3-201ENST00000582370 SSFA2P28290 1259 aa12.08□□□□□ -0.48
PDLIM1P3-201ENST00000582370 PUS7Q96PZ0 661 aaKnown RBP12.08□□□□□ -0.48
PDLIM1P3-201ENST00000582370 C4AP0C0L4 1744 aa12.07□□□□□ -0.48
PDLIM1P3-201ENST00000582370 KDM2BQ8NHM5 1336 aa12.07□□□□□ -0.48
PDLIM1P3-201ENST00000582370 KCPQ6ZWJ8 1503 aa12.06□□□□□ -0.48
PDLIM1P3-201ENST00000582370 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.06□□□□□ -0.48
PDLIM1P3-201ENST00000582370 HSPA1AP0DMV8 641 aaKnown RBP12.06□□□□□ -0.48
PDLIM1P3-201ENST00000582370 HSPA1BP0DMV9 641 aaKnown RBP12.06□□□□□ -0.48
PDLIM1P3-201ENST00000582370 TGFB2P61812 414 aa12.06□□□□□ -0.48
PDLIM1P3-201ENST00000582370 TMF1P82094 1093 aa12.06□□□□□ -0.48
PDLIM1P3-201ENST00000582370 LTV1Q96GA3 475 aaPredicted RBP12.06□□□□□ -0.48
PDLIM1P3-201ENST00000582370 BCS1LQ9Y276 419 aa12.06□□□□□ -0.48
PDLIM1P3-201ENST00000582370 PHF14O94880 888 aa12.05□□□□□ -0.48
PDLIM1P3-201ENST00000582370 AMIGO3Q86WK7 504 aa12.05□□□□□ -0.48
PDLIM1P3-201ENST00000582370 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
PDLIM1P3-201ENST00000582370 ARHGAP27Q6ZUM4 889 aa12.04□□□□□ -0.48
PDLIM1P3-201ENST00000582370 HDGFL2Q7Z4V5 671 aaPredicted RBP12.04□□□□□ -0.48
PDLIM1P3-201ENST00000582370 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
PDLIM1P3-201ENST00000582370 PCDH11XQ9BZA7 1347 aa12.04□□□□□ -0.48
PDLIM1P3-201ENST00000582370 PCDH11YQ9BZA8 1340 aa12.04□□□□□ -0.48
PDLIM1P3-201ENST00000582370 RTL1A6NKG5 1358 aa12.04□□□□□ -0.48
PDLIM1P3-201ENST00000582370 ZNF831Q5JPB2 1677 aa12.03□□□□□ -0.48
PDLIM1P3-201ENST00000582370 ST20-MTHFSA0A0A6YYL1 179 aa12.03□□□□□ -0.48
PDLIM1P3-201ENST00000582370 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
PDLIM1P3-201ENST00000582370 HSPA5P11021 654 aaKnown RBP12.03□□□□□ -0.48
PDLIM1P3-201ENST00000582370 HOXC9P31274 260 aa12.03□□□□□ -0.48
PDLIM1P3-201ENST00000582370 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms