RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 BCL9O00512 1426 aa22.14■■□□□ 1.14
RNF43-206ENST00000582293 SBF2Q86WG5 1849 aa22.13■■□□□ 1.13
RNF43-206ENST00000582293 TATP17735 454 aaPredicted RBP22.13■■□□□ 1.13
RNF43-206ENST00000582293 FAM196AQ6ZSG2 479 aa22.13■■□□□ 1.13
RNF43-206ENST00000582293 TNS1Q9HBL0 1735 aaKnown RBP22.13■■□□□ 1.13
RNF43-206ENST00000582293 SULT6B1Q6IMI4 303 aa22.12■■□□□ 1.13
RNF43-206ENST00000582293 ZCRB1Q8TBF4 217 aaKnown RBP22.12■■□□□ 1.13
RNF43-206ENST00000582293 MYBBP1AQ9BQG0 1328 aaKnown RBP22.1■■□□□ 1.13
RNF43-206ENST00000582293 CYP27B1O15528 508 aa22.09■■□□□ 1.13
RNF43-206ENST00000582293 PTF1AQ7RTS3 328 aa22.09■■□□□ 1.13
RNF43-206ENST00000582293 DDX54Q8TDD1 881 aaKnown RBP22.09■■□□□ 1.13
RNF43-206ENST00000582293 CFAP53Q96M91 514 aa22.09■■□□□ 1.13
RNF43-206ENST00000582293 HMOX1P09601 288 aa22.08■■□□□ 1.13
RNF43-206ENST00000582293 PLEKHG2Q9H7P9 1386 aa22.08■■□□□ 1.12
RNF43-206ENST00000582293 TRIM37O94972 964 aa22.06■■□□□ 1.12
RNF43-206ENST00000582293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.06■■□□□ 1.12
RNF43-206ENST00000582293 NHSQ6T4R5 1651 aa22.05■■□□□ 1.12
RNF43-206ENST00000582293 U2SURPO15042 1029 aaKnown RBP22.05■■□□□ 1.12
RNF43-206ENST00000582293 DOT1LQ8TEK3 1739 aa22.05■■□□□ 1.12
RNF43-206ENST00000582293 TOGARAM1Q9Y4F4 1720 aa22.05■■□□□ 1.12
RNF43-206ENST00000582293 PCDH11XQ9BZA7 1347 aa22.05■■□□□ 1.12
RNF43-206ENST00000582293 PCDH11YQ9BZA8 1340 aa22.05■■□□□ 1.12
RNF43-206ENST00000582293 CCDC125Q86Z20 511 aa22.04■■□□□ 1.12
RNF43-206ENST00000582293 KCNQ2O43526 872 aa22.03■■□□□ 1.12
RNF43-206ENST00000582293 SPG7Q9UQ90 795 aa22.03■■□□□ 1.12
RNF43-206ENST00000582293 DEFB132Q7Z7B7 95 aa22.02■■□□□ 1.12
RNF43-206ENST00000582293 ACSBG1Q96GR2 724 aa22.02■■□□□ 1.12
RNF43-206ENST00000582293 RSPH6AQ9H0K4 717 aa22.02■■□□□ 1.12
RNF43-206ENST00000582293 PHKG2P15735 406 aa22.01■■□□□ 1.11
RNF43-206ENST00000582293 NKX1-1Q15270 411 aaPredicted RBP22.01■■□□□ 1.11
RNF43-206ENST00000582293 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
RNF43-206ENST00000582293 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
RNF43-206ENST00000582293 PLEKHO1Q53GL0 409 aaPredicted RBP21.99■■□□□ 1.11
RNF43-206ENST00000582293 BCL11BQ9C0K0 894 aaPredicted RBP21.99■■□□□ 1.11
RNF43-206ENST00000582293 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
RNF43-206ENST00000582293 AMOTQ4VCS5 1084 aa21.98■■□□□ 1.11
RNF43-206ENST00000582293 CCDC184Q52MB2 194 aa21.98■■□□□ 1.11
RNF43-206ENST00000582293 BTAF1O14981 1849 aa21.97■■□□□ 1.11
RNF43-206ENST00000582293 MTHFSDQ2M296 383 aaKnown RBP21.97■■□□□ 1.11
RNF43-206ENST00000582293 IFNL2Q8IZJ0 200 aa21.97■■□□□ 1.11
RNF43-206ENST00000582293 PHACTR3Q96KR7 559 aa21.97■■□□□ 1.11
RNF43-206ENST00000582293 KDM6AO15550 1401 aaPredicted RBP21.97■■□□□ 1.11
RNF43-206ENST00000582293 PRKAR2BP31323 418 aa21.96■■□□□ 1.11
RNF43-206ENST00000582293 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
RNF43-206ENST00000582293 APBA3O96018 575 aa21.95■■□□□ 1.1
RNF43-206ENST00000582293 PRIM1P49642 420 aaKnown RBP21.95■■□□□ 1.1
RNF43-206ENST00000582293 EN1Q05925 392 aaPredicted RBP21.95■■□□□ 1.1
RNF43-206ENST00000582293 ITGB4P16144 1822 aa21.94■■□□□ 1.1
RNF43-206ENST00000582293 ANP32CO43423 234 aa21.94■■□□□ 1.1
RNF43-206ENST00000582293 FCHSD2O94868 740 aa21.94■■□□□ 1.1
RNF43-206ENST00000582293 SF3B2Q13435 895 aaKnown RBP21.94■■□□□ 1.1
RNF43-206ENST00000582293 CAMKK2Q96RR4 588 aa21.94■■□□□ 1.1
RNF43-206ENST00000582293 ADAMTS7Q9UKP4 1686 aa21.94■■□□□ 1.1
RNF43-206ENST00000582293 RGPD3A6NKT7 1758 aaPredicted RBP21.94■■□□□ 1.1
RNF43-206ENST00000582293 RGPD4Q7Z3J3 1758 aa21.94■■□□□ 1.1
RNF43-206ENST00000582293 PLEKHF1Q96S99 279 aa21.93■■□□□ 1.1
RNF43-206ENST00000582293 RREB1Q92766 1687 aa21.92■■□□□ 1.1
RNF43-206ENST00000582293 BAG6P46379 1132 aa21.92■■□□□ 1.1
RNF43-206ENST00000582293 EZH2Q15910 746 aaKnown RBP21.92■■□□□ 1.1
RNF43-206ENST00000582293 SCN11AQ9UI33 1791 aa21.9■■□□□ 1.1
RNF43-206ENST00000582293 PLSCR1O15162 318 aa21.9■■□□□ 1.1
RNF43-206ENST00000582293 AKAP4Q5JQC9 854 aa21.9■■□□□ 1.1
RNF43-206ENST00000582293 MPRIPQ6WCQ1 1025 aa21.89■■□□□ 1.09
RNF43-206ENST00000582293 PROM2Q8N271 834 aa21.89■■□□□ 1.09
RNF43-206ENST00000582293 SYTL4Q96C24 671 aaPredicted RBP21.89■■□□□ 1.09
RNF43-206ENST00000582293 DCAF5Q96JK2 942 aa21.89■■□□□ 1.09
RNF43-206ENST00000582293 VIRMAQ69YN4 1812 aaKnown RBP21.89■■□□□ 1.09
RNF43-206ENST00000582293 C1orf141Q5JVX7 400 aa21.88■■□□□ 1.09
RNF43-206ENST00000582293 NUP188Q5SRE5 1749 aa21.88■■□□□ 1.09
RNF43-206ENST00000582293 KAT6BQ8WYB5 2073 aa21.87■■□□□ 1.09
RNF43-206ENST00000582293 HSP90AB1P08238 724 aaKnown RBP21.87■■□□□ 1.09
RNF43-206ENST00000582293 PIGBQ92521 554 aa21.87■■□□□ 1.09
RNF43-206ENST00000582293 LGR6Q9HBX8 967 aa21.87■■□□□ 1.09
RNF43-206ENST00000582293 MRC1P22897 1456 aa21.86■■□□□ 1.09
RNF43-206ENST00000582293 GAS2L2Q8NHY3 880 aa21.86■■□□□ 1.09
RNF43-206ENST00000582293 ADAMTS8Q9UP79 889 aa21.86■■□□□ 1.09
RNF43-206ENST00000582293 LY75O60449 1722 aa21.86■■□□□ 1.09
RNF43-206ENST00000582293 MAP3K5Q99683 1374 aa21.85■■□□□ 1.09
RNF43-206ENST00000582293 ERVV-2B6SEH9 535 aa21.84■■□□□ 1.09
RNF43-206ENST00000582293 RNMTO43148 476 aaKnown RBP21.84■■□□□ 1.09
RNF43-206ENST00000582293 IL17REQ8NFR9 667 aa21.83■■□□□ 1.09
RNF43-206ENST00000582293 DLG5Q8TDM6 1919 aa21.82■■□□□ 1.08
RNF43-206ENST00000582293 GNAT3A8MTJ3 354 aa21.81■■□□□ 1.08
RNF43-206ENST00000582293 WDR43Q15061 677 aaKnown RBP eCLIP21.81■■□□□ 1.08
RNF43-206ENST00000582293 TXNRD1Q16881 649 aa21.81■■□□□ 1.08
RNF43-206ENST00000582293 PNISRQ8TF01 805 aaKnown RBP21.81■■□□□ 1.08
RNF43-206ENST00000582293 TMOD3Q9NYL9 352 aa21.81■■□□□ 1.08
RNF43-206ENST00000582293 PAPPAQ13219 1627 aa21.8■■□□□ 1.08
RNF43-206ENST00000582293 SIPA1L3O60292 1781 aaPredicted RBP21.8■■□□□ 1.08
RNF43-206ENST00000582293 CEMIPQ8WUJ3 1361 aa21.8■■□□□ 1.08
RNF43-206ENST00000582293 CCDC146Q8IYE0 955 aa21.8■■□□□ 1.08
RNF43-206ENST00000582293 MRS2Q9HD23 443 aa21.8■■□□□ 1.08
RNF43-206ENST00000582293 LRRC4BQ9NT99 713 aa21.8■■□□□ 1.08
RNF43-206ENST00000582293 ASAP1Q9ULH1 1129 aa21.8■■□□□ 1.08
RNF43-206ENST00000582293 NFATC2IPQ8NCF5 419 aa21.79■■□□□ 1.08
RNF43-206ENST00000582293 ATG3Q9NT62 314 aa21.79■■□□□ 1.08
RNF43-206ENST00000582293 PALLDQ8WX93 1383 aa21.78■■□□□ 1.08
RNF43-206ENST00000582293 CABP4P57796 275 aa21.78■■□□□ 1.08
RNF43-206ENST00000582293 NFE2L2Q16236 605 aa21.78■■□□□ 1.08
RNF43-206ENST00000582293 SLC52A2Q9HAB3 445 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms