RNA–Protein interactions for RNA: ENST00000582055.1

LIMD2-210, Transcript of LIM domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMD2, Length 509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-210ENST00000582055 TUBGCP6Q96RT7 1819 aa17.54■□□□□ 0.4
LIMD2-210ENST00000582055 FYB1O15117 783 aa17.53■□□□□ 0.4
LIMD2-210ENST00000582055 SLC16A10Q8TF71 515 aa17.53■□□□□ 0.4
LIMD2-210ENST00000582055 KIF20BQ96Q89 1820 aa17.52■□□□□ 0.4
LIMD2-210ENST00000582055 RRS1Q15050 365 aaKnown RBP17.52■□□□□ 0.4
LIMD2-210ENST00000582055 GGNBP2Q9H3C7 697 aa17.52■□□□□ 0.4
LIMD2-210ENST00000582055 COL24A1Q17RW2 1714 aa17.52■□□□□ 0.39
LIMD2-210ENST00000582055 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
LIMD2-210ENST00000582055 NBPF6Q5VWK0 638 aa17.51■□□□□ 0.39
LIMD2-210ENST00000582055 NBPF4Q96M43 638 aa17.51■□□□□ 0.39
LIMD2-210ENST00000582055 TFCP2L1Q9NZI6 479 aa17.5■□□□□ 0.39
LIMD2-210ENST00000582055 MEGF6O75095 1541 aa17.5■□□□□ 0.39
LIMD2-210ENST00000582055 MAP3K5Q99683 1374 aa17.5■□□□□ 0.39
LIMD2-210ENST00000582055 CGNL1Q0VF96 1302 aa17.49■□□□□ 0.39
LIMD2-210ENST00000582055 PNPLA7Q6ZV29 1317 aa17.49■□□□□ 0.39
LIMD2-210ENST00000582055 KCNQ4P56696 695 aa17.49■□□□□ 0.39
LIMD2-210ENST00000582055 USP47Q96K76 1375 aa17.49■□□□□ 0.39
LIMD2-210ENST00000582055 POLD1P28340 1107 aa17.48■□□□□ 0.39
LIMD2-210ENST00000582055 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
LIMD2-210ENST00000582055 RAPGEF4Q8WZA2 1011 aa17.48■□□□□ 0.39
LIMD2-210ENST00000582055 NSD2O96028 1365 aa17.48■□□□□ 0.39
LIMD2-210ENST00000582055 SMG6Q86US8 1419 aaKnown RBP17.47■□□□□ 0.39
LIMD2-210ENST00000582055 USHBP1Q8N6Y0 703 aa17.47■□□□□ 0.39
LIMD2-210ENST00000582055 ZNF784Q8NCA9 323 aaPredicted RBP17.47■□□□□ 0.39
LIMD2-210ENST00000582055 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
LIMD2-210ENST00000582055 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
LIMD2-210ENST00000582055 INSRP06213 1382 aa17.45■□□□□ 0.38
LIMD2-210ENST00000582055 TRIM26Q12899 539 aaPredicted RBP17.45■□□□□ 0.38
LIMD2-210ENST00000582055 GPR162Q16538 588 aa17.45■□□□□ 0.38
LIMD2-210ENST00000582055 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
LIMD2-210ENST00000582055 KLHL34Q8N239 644 aa17.45■□□□□ 0.38
LIMD2-210ENST00000582055 MAP2P11137 1827 aaKnown RBP17.44■□□□□ 0.38
LIMD2-210ENST00000582055 ITGB4P16144 1822 aa17.44■□□□□ 0.38
LIMD2-210ENST00000582055 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
LIMD2-210ENST00000582055 FLT4P35916 1363 aa17.43■□□□□ 0.38
LIMD2-210ENST00000582055 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
LIMD2-210ENST00000582055 UTRNP46939 3433 aa17.43■□□□□ 0.38
LIMD2-210ENST00000582055 C5P01031 1676 aa17.42■□□□□ 0.38
LIMD2-210ENST00000582055 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
LIMD2-210ENST00000582055 PCDH11XQ9BZA7 1347 aa17.42■□□□□ 0.38
LIMD2-210ENST00000582055 PCDH11YQ9BZA8 1340 aa17.42■□□□□ 0.38
LIMD2-210ENST00000582055 MSH5O43196 834 aa17.41■□□□□ 0.38
LIMD2-210ENST00000582055 CARD14Q9BXL6 1004 aa17.41■□□□□ 0.38
LIMD2-210ENST00000582055 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
LIMD2-210ENST00000582055 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
LIMD2-210ENST00000582055 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
LIMD2-210ENST00000582055 PKD1L3Q7Z443 1732 aa17.38■□□□□ 0.37
LIMD2-210ENST00000582055 CYP27B1O15528 508 aa17.38■□□□□ 0.37
LIMD2-210ENST00000582055 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
LIMD2-210ENST00000582055 NLGN2Q8NFZ4 835 aa17.37■□□□□ 0.37
LIMD2-210ENST00000582055 TIMELESSQ9UNS1 1208 aa17.37■□□□□ 0.37
LIMD2-210ENST00000582055 NSD3Q9BZ95 1437 aa17.37■□□□□ 0.37
LIMD2-210ENST00000582055 ANKRD26Q9UPS8 1709 aa17.36■□□□□ 0.37
LIMD2-210ENST00000582055 TOGARAM1Q9Y4F4 1720 aa17.36■□□□□ 0.37
LIMD2-210ENST00000582055 PPM1GO15355 546 aaPredicted RBP17.36■□□□□ 0.37
LIMD2-210ENST00000582055 FLAD1Q8NFF5 587 aa17.36■□□□□ 0.37
LIMD2-210ENST00000582055 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
LIMD2-210ENST00000582055 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
LIMD2-210ENST00000582055 C4BP0C0L5 1744 aa17.34■□□□□ 0.37
LIMD2-210ENST00000582055 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
LIMD2-210ENST00000582055 SPG7Q9UQ90 795 aa17.34■□□□□ 0.37
LIMD2-210ENST00000582055 UBR3Q6ZT12 1888 aa17.33■□□□□ 0.37
LIMD2-210ENST00000582055 NKX1-1Q15270 411 aaPredicted RBP17.33■□□□□ 0.36
LIMD2-210ENST00000582055 MSL1Q68DK7 614 aa17.33■□□□□ 0.36
LIMD2-210ENST00000582055 NCAPD2Q15021 1401 aa17.32■□□□□ 0.36
LIMD2-210ENST00000582055 GRIN3BO60391 1043 aa17.32■□□□□ 0.36
LIMD2-210ENST00000582055 PIGBQ92521 554 aa17.32■□□□□ 0.36
LIMD2-210ENST00000582055 C1QTNF8P60827 252 aa17.31■□□□□ 0.36
LIMD2-210ENST00000582055 EYA1Q99502 592 aa17.31■□□□□ 0.36
LIMD2-210ENST00000582055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.36
LIMD2-210ENST00000582055 YBX3P16989 372 aaKnown RBP eCLIP17.3■□□□□ 0.36
LIMD2-210ENST00000582055 AK7Q96M32 723 aa17.3■□□□□ 0.36
LIMD2-210ENST00000582055 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
LIMD2-210ENST00000582055 CD2APQ9Y5K6 639 aa17.3■□□□□ 0.36
LIMD2-210ENST00000582055 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
LIMD2-210ENST00000582055 POLR3GLQ9BT43 218 aa17.28■□□□□ 0.36
LIMD2-210ENST00000582055 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
LIMD2-210ENST00000582055 SENP3-EIF4A1A0A087X0R7 540 aa17.27■□□□□ 0.36
LIMD2-210ENST00000582055 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.36
LIMD2-210ENST00000582055 SIK1P57059 783 aa17.27■□□□□ 0.36
LIMD2-210ENST00000582055 GOLGB1Q14789 3259 aaKnown RBP17.27■□□□□ 0.35
LIMD2-210ENST00000582055 CLSPNQ9HAW4 1339 aa17.26■□□□□ 0.35
LIMD2-210ENST00000582055 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
LIMD2-210ENST00000582055 PHF14O94880 888 aa17.26■□□□□ 0.35
LIMD2-210ENST00000582055 PHKG2P15735 406 aa17.26■□□□□ 0.35
LIMD2-210ENST00000582055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
LIMD2-210ENST00000582055 SSFA2P28290 1259 aa17.25■□□□□ 0.35
LIMD2-210ENST00000582055 TNNT2P45379 298 aaPredicted RBP17.25■□□□□ 0.35
LIMD2-210ENST00000582055 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
LIMD2-210ENST00000582055 ATP6V1AP38606 617 aa17.24■□□□□ 0.35
LIMD2-210ENST00000582055 EIF4A2Q14240 407 aaKnown RBP17.24■□□□□ 0.35
LIMD2-210ENST00000582055 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
LIMD2-210ENST00000582055 LINC00116Q8NCU8 138 aa17.24■□□□□ 0.35
LIMD2-210ENST00000582055 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
LIMD2-210ENST00000582055 ASAP1Q9ULH1 1129 aa17.24■□□□□ 0.35
LIMD2-210ENST00000582055 PLEKHG2Q9H7P9 1386 aa17.21■□□□□ 0.35
LIMD2-210ENST00000582055 ITPK1Q13572 414 aa17.21■□□□□ 0.35
LIMD2-210ENST00000582055 ATG3Q9NT62 314 aa17.21■□□□□ 0.35
LIMD2-210ENST00000582055 GNPATO15228 680 aa17.2■□□□□ 0.34
LIMD2-210ENST00000582055 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms