RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 RAPGEF4Q8WZA2 1011 aa14.03□□□□□ -0.16
PPP4R1-220ENST00000581835 NHSQ6T4R5 1651 aa14.03□□□□□ -0.16
PPP4R1-220ENST00000581835 RGPD3A6NKT7 1758 aaPredicted RBP14.03□□□□□ -0.16
PPP4R1-220ENST00000581835 RGPD4Q7Z3J3 1758 aa14.03□□□□□ -0.16
PPP4R1-220ENST00000581835 NUP188Q5SRE5 1749 aa14.02□□□□□ -0.16
PPP4R1-220ENST00000581835 NCAPD2Q15021 1401 aa14.02□□□□□ -0.16
PPP4R1-220ENST00000581835 KCNQ2O43526 872 aa14.02□□□□□ -0.17
PPP4R1-220ENST00000581835 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
PPP4R1-220ENST00000581835 ACSBG1Q96GR2 724 aa14.02□□□□□ -0.17
PPP4R1-220ENST00000581835 EIF4A2Q14240 407 aaKnown RBP14.01□□□□□ -0.17
PPP4R1-220ENST00000581835 EYA1Q99502 592 aa14.01□□□□□ -0.17
PPP4R1-220ENST00000581835 BTAF1O14981 1849 aa14□□□□□ -0.17
PPP4R1-220ENST00000581835 PSDA5PKW4 1024 aaPredicted RBP13.99□□□□□ -0.17
PPP4R1-220ENST00000581835 CC2D1BQ5T0F9 858 aaKnown RBP13.99□□□□□ -0.17
PPP4R1-220ENST00000581835 NPC1L1Q9UHC9 1359 aa13.98□□□□□ -0.17
PPP4R1-220ENST00000581835 PROM2Q8N271 834 aa13.98□□□□□ -0.17
PPP4R1-220ENST00000581835 PKD1L3Q7Z443 1732 aa13.98□□□□□ -0.17
PPP4R1-220ENST00000581835 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
PPP4R1-220ENST00000581835 IGSF1Q8N6C5 1336 aa13.97□□□□□ -0.17
PPP4R1-220ENST00000581835 R3HDM1Q15032 1099 aaKnown RBP13.97□□□□□ -0.17
PPP4R1-220ENST00000581835 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.17
PPP4R1-220ENST00000581835 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.17
PPP4R1-220ENST00000581835 CYP27B1O15528 508 aa13.96□□□□□ -0.17
PPP4R1-220ENST00000581835 PRIM1P49642 420 aaKnown RBP13.95□□□□□ -0.18
PPP4R1-220ENST00000581835 MTHFSP49914 203 aa13.95□□□□□ -0.18
PPP4R1-220ENST00000581835 TXNRD1Q16881 649 aa13.95□□□□□ -0.18
PPP4R1-220ENST00000581835 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
PPP4R1-220ENST00000581835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.95□□□□□ -0.181e-9■□□□□ 11
PPP4R1-220ENST00000581835 IL13P35225 146 aa13.94□□□□□ -0.18
PPP4R1-220ENST00000581835 CNGB1Q14028 1251 aaPredicted RBP13.94□□□□□ -0.18
PPP4R1-220ENST00000581835 SYTL4Q96C24 671 aaPredicted RBP13.94□□□□□ -0.18
PPP4R1-220ENST00000581835 SPG7Q9UQ90 795 aa13.94□□□□□ -0.18
PPP4R1-220ENST00000581835 ITGB4P16144 1822 aa13.93□□□□□ -0.18
PPP4R1-220ENST00000581835 PLEKHG2Q9H7P9 1386 aa13.92□□□□□ -0.18
PPP4R1-220ENST00000581835 TOGARAM1Q9Y4F4 1720 aa13.91□□□□□ -0.18
PPP4R1-220ENST00000581835 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
PPP4R1-220ENST00000581835 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
PPP4R1-220ENST00000581835 LY75O60449 1722 aa13.9□□□□□ -0.18
PPP4R1-220ENST00000581835 SULT6B1Q6IMI4 303 aa13.9□□□□□ -0.18
PPP4R1-220ENST00000581835 AEBP1Q8IUX7 1158 aa13.9□□□□□ -0.18
PPP4R1-220ENST00000581835 IFNL2Q8IZJ0 200 aa13.9□□□□□ -0.18
PPP4R1-220ENST00000581835 KDRP35968 1356 aa13.9□□□□□ -0.18
PPP4R1-220ENST00000581835 PHKG2P15735 406 aa13.89□□□□□ -0.19
PPP4R1-220ENST00000581835 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
PPP4R1-220ENST00000581835 LRP5O75197 1615 aa13.89□□□□□ -0.19
PPP4R1-220ENST00000581835 PAPPAQ13219 1627 aa13.89□□□□□ -0.19
PPP4R1-220ENST00000581835 DIAPH1O60610 1272 aaKnown RBP13.88□□□□□ -0.19
PPP4R1-220ENST00000581835 SLC15A2Q16348 729 aa13.88□□□□□ -0.19
PPP4R1-220ENST00000581835 PLEKHO1Q53GL0 409 aaPredicted RBP13.88□□□□□ -0.19
PPP4R1-220ENST00000581835 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
PPP4R1-220ENST00000581835 MPRIPQ6WCQ1 1025 aa13.88□□□□□ -0.19
PPP4R1-220ENST00000581835 AMOTQ4VCS5 1084 aa13.87□□□□□ -0.19
PPP4R1-220ENST00000581835 STK32BQ9NY57 414 aa13.87□□□□□ -0.19
PPP4R1-220ENST00000581835 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
PPP4R1-220ENST00000581835 PIGBQ92521 554 aa13.86□□□□□ -0.19
PPP4R1-220ENST00000581835 CASZ1Q86V15 1759 aa13.86□□□□□ -0.19
PPP4R1-220ENST00000581835 HMOX1P09601 288 aa13.85□□□□□ -0.19
PPP4R1-220ENST00000581835 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
PPP4R1-220ENST00000581835 KCNQ4P56696 695 aa13.85□□□□□ -0.19
PPP4R1-220ENST00000581835 HSP90AB1P08238 724 aaKnown RBP13.84□□□□□ -0.19
PPP4R1-220ENST00000581835 ZNF530Q6P9A1 599 aaPredicted RBP13.84□□□□□ -0.19
PPP4R1-220ENST00000581835 PDGFDQ9GZP0 370 aaPredicted RBP13.84□□□□□ -0.19
PPP4R1-220ENST00000581835 CCNL1Q9UK58 526 aaPredicted RBP13.84□□□□□ -0.19
PPP4R1-220ENST00000581835 TAF1LQ8IZX4 1826 aa13.83□□□□□ -0.2
PPP4R1-220ENST00000581835 ZEB1P37275 1124 aaPredicted RBP13.83□□□□□ -0.2
PPP4R1-220ENST00000581835 ZNF827Q17R98 1081 aa13.83□□□□□ -0.2
PPP4R1-220ENST00000581835 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
PPP4R1-220ENST00000581835 DCAF5Q96JK2 942 aa13.83□□□□□ -0.2
PPP4R1-220ENST00000581835 TMOD3Q9NYL9 352 aa13.83□□□□□ -0.2
PPP4R1-220ENST00000581835 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
PPP4R1-220ENST00000581835 PALLDQ8WX93 1383 aa13.83□□□□□ -0.2
PPP4R1-220ENST00000581835 QSER1Q2KHR3 1735 aa13.82□□□□□ -0.2
PPP4R1-220ENST00000581835 ERVV-2B6SEH9 535 aa13.82□□□□□ -0.2
PPP4R1-220ENST00000581835 C1orf141Q5JVX7 400 aa13.82□□□□□ -0.2
PPP4R1-220ENST00000581835 SMARCC1Q92922 1105 aaPredicted RBP13.82□□□□□ -0.2
PPP4R1-220ENST00000581835 TUBGCP6Q96RT7 1819 aa13.82□□□□□ -0.2
PPP4R1-220ENST00000581835 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
PPP4R1-220ENST00000581835 SCN11AQ9UI33 1791 aa13.81□□□□□ -0.2
PPP4R1-220ENST00000581835 U2SURPO15042 1029 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-220ENST00000581835 DDX10Q13206 875 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-220ENST00000581835 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
PPP4R1-220ENST00000581835 C5P01031 1676 aa13.81□□□□□ -0.2
PPP4R1-220ENST00000581835 AKAP4Q5JQC9 854 aa13.8□□□□□ -0.2
PPP4R1-220ENST00000581835 SPON1Q9HCB6 807 aa13.8□□□□□ -0.2
PPP4R1-220ENST00000581835 ASAP1Q9ULH1 1129 aa13.8□□□□□ -0.2
PPP4R1-220ENST00000581835 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
PPP4R1-220ENST00000581835 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
PPP4R1-220ENST00000581835 ZBTB7AO95365 584 aa13.78□□□□□ -0.2
PPP4R1-220ENST00000581835 CABP4P57796 275 aa13.78□□□□□ -0.2
PPP4R1-220ENST00000581835 TFCP2L1Q9NZI6 479 aa13.78□□□□□ -0.2
PPP4R1-220ENST00000581835 PNPLA7Q6ZV29 1317 aa13.78□□□□□ -0.2
PPP4R1-220ENST00000581835 LOC102724428A0A0B4J2F2 783 aa13.77□□□□□ -0.21
PPP4R1-220ENST00000581835 HMGB2P26583 209 aaKnown RBP13.77□□□□□ -0.21
PPP4R1-220ENST00000581835 SIK1P57059 783 aa13.77□□□□□ -0.21
PPP4R1-220ENST00000581835 NUDCQ9Y266 331 aa13.77□□□□□ -0.21
PPP4R1-220ENST00000581835 NFATC2IPQ8NCF5 419 aa13.76□□□□□ -0.21
PPP4R1-220ENST00000581835 MTFR1LQ9H019 292 aa13.76□□□□□ -0.21
PPP4R1-220ENST00000581835 LGR6Q9HBX8 967 aa13.76□□□□□ -0.21
PPP4R1-220ENST00000581835 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
PPP4R1-220ENST00000581835 C4BP0C0L5 1744 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms