RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 AEBP1Q8IUX7 1158 aa11.9□□□□□ -0.5
RTTN-208ENST00000581709 MARCH10Q8NA82 808 aaPredicted RBP11.9□□□□□ -0.5
RTTN-208ENST00000581709 MAP2P11137 1827 aaKnown RBP11.9□□□□□ -0.5
RTTN-208ENST00000581709 DISP2A7MBM2 1401 aa11.89□□□□□ -0.51
RTTN-208ENST00000581709 WDR43Q15061 677 aaKnown RBP eCLIP11.89□□□□□ -0.51
RTTN-208ENST00000581709 CCDC125Q86Z20 511 aa11.89□□□□□ -0.51
RTTN-208ENST00000581709 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
RTTN-208ENST00000581709 PCDH11XQ9BZA7 1347 aa11.87□□□□□ -0.51
RTTN-208ENST00000581709 PCDH11YQ9BZA8 1340 aa11.87□□□□□ -0.51
RTTN-208ENST00000581709 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
RTTN-208ENST00000581709 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
RTTN-208ENST00000581709 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
RTTN-208ENST00000581709 KDRP35968 1356 aa11.87□□□□□ -0.51
RTTN-208ENST00000581709 RGPD5Q99666 1765 aa11.87□□□□□ -0.51
RTTN-208ENST00000581709 OVOS2A0A0G2JMS6 1433 aa11.86□□□□□ -0.51
RTTN-208ENST00000581709 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
RTTN-208ENST00000581709 CYP27B1O15528 508 aa11.86□□□□□ -0.51
RTTN-208ENST00000581709 HSP90AB1P08238 724 aaKnown RBP11.86□□□□□ -0.51
RTTN-208ENST00000581709 PRKAR2BP31323 418 aa11.86□□□□□ -0.51
RTTN-208ENST00000581709 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
RTTN-208ENST00000581709 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
RTTN-208ENST00000581709 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
RTTN-208ENST00000581709 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
RTTN-208ENST00000581709 MEGF6O75095 1541 aa11.86□□□□□ -0.51
RTTN-208ENST00000581709 COL3A1P02461 1466 aaPredicted RBP11.85□□□□□ -0.51
RTTN-208ENST00000581709 SOCS7O14512 581 aa11.85□□□□□ -0.51
RTTN-208ENST00000581709 TRIM37O94972 964 aa11.85□□□□□ -0.51
RTTN-208ENST00000581709 UPF1Q92900 1129 aaKnown RBP eCLIP11.85□□□□□ -0.51
RTTN-208ENST00000581709 PHKG2P15735 406 aa11.84□□□□□ -0.51
RTTN-208ENST00000581709 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
RTTN-208ENST00000581709 MTHFSDQ2M296 383 aaKnown RBP11.84□□□□□ -0.51
RTTN-208ENST00000581709 AKAP4Q5JQC9 854 aa11.84□□□□□ -0.51
RTTN-208ENST00000581709 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
RTTN-208ENST00000581709 BCL11BQ9C0K0 894 aaPredicted RBP11.84□□□□□ -0.51
RTTN-208ENST00000581709 ADAMTS8Q9UP79 889 aa11.84□□□□□ -0.51
RTTN-208ENST00000581709 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
RTTN-208ENST00000581709 CCDC184Q52MB2 194 aa11.83□□□□□ -0.52
RTTN-208ENST00000581709 SYTL4Q96C24 671 aaPredicted RBP11.83□□□□□ -0.52
RTTN-208ENST00000581709 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
RTTN-208ENST00000581709 DCAF5Q96JK2 942 aa11.83□□□□□ -0.52
RTTN-208ENST00000581709 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
RTTN-208ENST00000581709 FAM208AQ9UK61 1670 aaKnown RBP11.83□□□□□ -0.52
RTTN-208ENST00000581709 THSD7AQ9UPZ6 1657 aa11.83□□□□□ -0.52
RTTN-208ENST00000581709 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
RTTN-208ENST00000581709 APBA3O96018 575 aa11.82□□□□□ -0.52
RTTN-208ENST00000581709 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
RTTN-208ENST00000581709 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
RTTN-208ENST00000581709 PLEKHF1Q96S99 279 aa11.82□□□□□ -0.52
RTTN-208ENST00000581709 BCL9O00512 1426 aa11.82□□□□□ -0.52
RTTN-208ENST00000581709 GNAT3A8MTJ3 354 aa11.81□□□□□ -0.52
RTTN-208ENST00000581709 CCER2I3L3R5 266 aa11.81□□□□□ -0.52
RTTN-208ENST00000581709 KCNQ2O43526 872 aa11.81□□□□□ -0.52
RTTN-208ENST00000581709 MPRIPQ6WCQ1 1025 aa11.81□□□□□ -0.52
RTTN-208ENST00000581709 RTF1Q92541 710 aaKnown RBP11.81□□□□□ -0.52
RTTN-208ENST00000581709 RUNDC1Q96C34 613 aa11.81□□□□□ -0.52
RTTN-208ENST00000581709 ERVV-2B6SEH9 535 aa11.8□□□□□ -0.52
RTTN-208ENST00000581709 BAG6P46379 1132 aa11.8□□□□□ -0.52
RTTN-208ENST00000581709 HTATSF1O43719 755 aaKnown RBP11.79□□□□□ -0.52
RTTN-208ENST00000581709 CABP4P57796 275 aa11.79□□□□□ -0.52
RTTN-208ENST00000581709 MIER1Q8N108 512 aa11.79□□□□□ -0.52
RTTN-208ENST00000581709 PARP4Q9UKK3 1724 aaKnown RBP11.78□□□□□ -0.52
RTTN-208ENST00000581709 PLSCR1O15162 318 aa11.78□□□□□ -0.52
RTTN-208ENST00000581709 NFE2L2Q16236 605 aa11.78□□□□□ -0.52
RTTN-208ENST00000581709 CCDC146Q8IYE0 955 aa11.78□□□□□ -0.52
RTTN-208ENST00000581709 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
RTTN-208ENST00000581709 LGR6Q9HBX8 967 aa11.78□□□□□ -0.52
RTTN-208ENST00000581709 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
RTTN-208ENST00000581709 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
RTTN-208ENST00000581709 RIPK4P57078 832 aa11.77□□□□□ -0.53
RTTN-208ENST00000581709 PTF1AQ7RTS3 328 aa11.77□□□□□ -0.53
RTTN-208ENST00000581709 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.53
RTTN-208ENST00000581709 PIGBQ92521 554 aa11.77□□□□□ -0.53
RTTN-208ENST00000581709 RGPD2P0DJD1 1756 aa11.77□□□□□ -0.53
RTTN-208ENST00000581709 LRRC37A3O60309 1634 aa11.76□□□□□ -0.53
RTTN-208ENST00000581709 TMPOP42166 694 aaKnown RBP11.76□□□□□ -0.53
RTTN-208ENST00000581709 EN1Q05925 392 aaPredicted RBP11.76□□□□□ -0.53
RTTN-208ENST00000581709 LMOD3Q0VAK6 560 aa11.76□□□□□ -0.53
RTTN-208ENST00000581709 TEFQ10587 303 aa11.76□□□□□ -0.53
RTTN-208ENST00000581709 IL17REQ8NFR9 667 aa11.76□□□□□ -0.53
RTTN-208ENST00000581709 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
RTTN-208ENST00000581709 RGPD1P0DJD0 1748 aa11.76□□□□□ -0.53
RTTN-208ENST00000581709 MAP3K5Q99683 1374 aa11.76□□□□□ -0.53
RTTN-208ENST00000581709 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
RTTN-208ENST00000581709 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
RTTN-208ENST00000581709 DEFB132Q7Z7B7 95 aa11.75□□□□□ -0.53
RTTN-208ENST00000581709 SLC52A2Q9HAB3 445 aa11.75□□□□□ -0.53
RTTN-208ENST00000581709 APAF1O14727 1248 aa11.74□□□□□ -0.53
RTTN-208ENST00000581709 MCM10Q7L590 875 aa11.74□□□□□ -0.53
RTTN-208ENST00000581709 CAMKK2Q96RR4 588 aa11.74□□□□□ -0.53
RTTN-208ENST00000581709 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
RTTN-208ENST00000581709 EZH2Q15910 746 aaKnown RBP11.73□□□□□ -0.53
RTTN-208ENST00000581709 RRP7AQ9Y3A4 280 aaKnown RBP11.73□□□□□ -0.53
RTTN-208ENST00000581709 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
RTTN-208ENST00000581709 TAF7Q15545 349 aaPredicted RBP11.72□□□□□ -0.53
RTTN-208ENST00000581709 SLC27A3Q5K4L6 730 aa11.72□□□□□ -0.53
RTTN-208ENST00000581709 ATG3Q9NT62 314 aa11.72□□□□□ -0.53
RTTN-208ENST00000581709 ASAP1Q9ULH1 1129 aa11.72□□□□□ -0.53
RTTN-208ENST00000581709 BTBD11A6QL63 1104 aa11.71□□□□□ -0.53
RTTN-208ENST00000581709 TXNRD1Q16881 649 aa11.71□□□□□ -0.53
RTTN-208ENST00000581709 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms