RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 HSP90AB2PQ58FF8 381 aa28.97■■■□□ 2.23
CCDC42-203ENST00000581598 STK32BQ9NY57 414 aa28.97■■■□□ 2.23
CCDC42-203ENST00000581598 SLC15A2Q16348 729 aa28.96■■■□□ 2.23
CCDC42-203ENST00000581598 DOT1LQ8TEK3 1739 aa28.94■■■□□ 2.22
CCDC42-203ENST00000581598 MAP2P11137 1827 aaKnown RBP28.93■■■□□ 2.22
CCDC42-203ENST00000581598 HSPA5P11021 654 aaKnown RBP28.93■■■□□ 2.22
CCDC42-203ENST00000581598 RAPGEF4Q8WZA2 1011 aa28.92■■■□□ 2.22
CCDC42-203ENST00000581598 EMILIN1Q9Y6C2 1016 aa28.91■■■□□ 2.22
CCDC42-203ENST00000581598 NCAPD2Q15021 1401 aa28.9■■■□□ 2.22
CCDC42-203ENST00000581598 USHBP1Q8N6Y0 703 aa28.9■■■□□ 2.22
CCDC42-203ENST00000581598 TATP17735 454 aaPredicted RBP28.89■■■□□ 2.22
CCDC42-203ENST00000581598 PDGFDQ9GZP0 370 aaPredicted RBP28.89■■■□□ 2.22
CCDC42-203ENST00000581598 SLC27A3Q5K4L6 730 aa28.88■■■□□ 2.21
CCDC42-203ENST00000581598 LY75O60449 1722 aa28.88■■■□□ 2.21
CCDC42-203ENST00000581598 WASHC2AQ641Q2 1341 aa28.88■■■□□ 2.21
CCDC42-203ENST00000581598 NSD2O96028 1365 aa28.88■■■□□ 2.21
CCDC42-203ENST00000581598 PRIM1P49642 420 aaKnown RBP28.87■■■□□ 2.21
CCDC42-203ENST00000581598 PPP1R1BQ9UD71 204 aaPredicted RBP28.87■■■□□ 2.21
CCDC42-203ENST00000581598 POLR3GLQ9BT43 218 aa28.86■■■□□ 2.21
CCDC42-203ENST00000581598 LRRC4BQ9NT99 713 aa28.86■■■□□ 2.21
CCDC42-203ENST00000581598 QSER1Q2KHR3 1735 aa28.85■■■□□ 2.21
CCDC42-203ENST00000581598 PKD1L3Q7Z443 1732 aa28.84■■■□□ 2.21
CCDC42-203ENST00000581598 PCDH11XQ9BZA7 1347 aa28.84■■■□□ 2.21
CCDC42-203ENST00000581598 PCDH11YQ9BZA8 1340 aa28.84■■■□□ 2.21
CCDC42-203ENST00000581598 SYTL4Q96C24 671 aaPredicted RBP28.83■■■□□ 2.21
CCDC42-203ENST00000581598 POLKQ9UBT6 870 aa28.83■■■□□ 2.21
CCDC42-203ENST00000581598 ZBTB7AO95365 584 aa28.82■■■□□ 2.2
CCDC42-203ENST00000581598 PTGER2P43116 358 aa28.81■■■□□ 2.2
CCDC42-203ENST00000581598 MTFR1LQ9H019 292 aa28.81■■■□□ 2.2
CCDC42-203ENST00000581598 PPM1GO15355 546 aaPredicted RBP28.8■■■□□ 2.2
CCDC42-203ENST00000581598 ZNF827Q17R98 1081 aa28.8■■■□□ 2.2
CCDC42-203ENST00000581598 AKT1S1Q96B36 256 aa28.8■■■□□ 2.2
CCDC42-203ENST00000581598 PANK3Q9H999 370 aa28.8■■■□□ 2.2
CCDC42-203ENST00000581598 CYP27B1O15528 508 aa28.76■■■□□ 2.19
CCDC42-203ENST00000581598 EYA1Q99502 592 aa28.76■■■□□ 2.19
CCDC42-203ENST00000581598 SGIP1Q9BQI5 828 aa28.76■■■□□ 2.19
CCDC42-203ENST00000581598 ATF5Q9Y2D1 282 aaPredicted RBP28.76■■■□□ 2.19
CCDC42-203ENST00000581598 PLEKHG2Q9H7P9 1386 aa28.75■■■□□ 2.19
CCDC42-203ENST00000581598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.74■■■□□ 2.19
CCDC42-203ENST00000581598 TUBGCP6Q96RT7 1819 aa28.73■■■□□ 2.19
CCDC42-203ENST00000581598 TOGARAM1Q9Y4F4 1720 aa28.73■■■□□ 2.19
CCDC42-203ENST00000581598 ITGB4P16144 1822 aa28.73■■■□□ 2.19
CCDC42-203ENST00000581598 NKX1-1Q15270 411 aaPredicted RBP28.72■■■□□ 2.19
CCDC42-203ENST00000581598 SLC16A10Q8TF71 515 aa28.72■■■□□ 2.19
CCDC42-203ENST00000581598 SPG7Q9UQ90 795 aa28.72■■■□□ 2.19
CCDC42-203ENST00000581598 COL24A1Q17RW2 1714 aa28.72■■■□□ 2.19
CCDC42-203ENST00000581598 CCNL1Q9UK58 526 aaPredicted RBP28.71■■■□□ 2.19
CCDC42-203ENST00000581598 HMGB2P26583 209 aaKnown RBP28.7■■■□□ 2.18
CCDC42-203ENST00000581598 TNNT2P45379 298 aaPredicted RBP28.7■■■□□ 2.18
CCDC42-203ENST00000581598 EIF4A2Q14240 407 aaKnown RBP28.7■■■□□ 2.18
CCDC42-203ENST00000581598 PNPLA7Q6ZV29 1317 aa28.69■■■□□ 2.18
CCDC42-203ENST00000581598 KCNQ4P56696 695 aa28.68■■■□□ 2.18
CCDC42-203ENST00000581598 YY1P25490 414 aa28.67■■■□□ 2.18
CCDC42-203ENST00000581598 TFCP2L1Q9NZI6 479 aa28.67■■■□□ 2.18
CCDC42-203ENST00000581598 C5P01031 1676 aa28.67■■■□□ 2.18
CCDC42-203ENST00000581598 DCAF8L1A6NGE4 600 aa28.66■■■□□ 2.18
CCDC42-203ENST00000581598 IGSF1Q8N6C5 1336 aa28.66■■■□□ 2.18
CCDC42-203ENST00000581598 TAF1LQ8IZX4 1826 aa28.65■■■□□ 2.18
CCDC42-203ENST00000581598 MPRIPQ6WCQ1 1025 aa28.65■■■□□ 2.18
CCDC42-203ENST00000581598 KNSTRNQ9Y448 316 aa28.65■■■□□ 2.18
CCDC42-203ENST00000581598 PALLDQ8WX93 1383 aa28.64■■■□□ 2.18
CCDC42-203ENST00000581598 MAP3K5Q99683 1374 aa28.64■■■□□ 2.18
CCDC42-203ENST00000581598 MORC1Q86VD1 984 aa28.64■■■□□ 2.18
CCDC42-203ENST00000581598 ARXQ96QS3 562 aa28.64■■■□□ 2.18
CCDC42-203ENST00000581598 SMARCC1Q92922 1105 aaPredicted RBP28.63■■■□□ 2.17
CCDC42-203ENST00000581598 SYT17Q9BSW7 474 aa28.63■■■□□ 2.17
CCDC42-203ENST00000581598 FHDC1Q9C0D6 1143 aaPredicted RBP28.63■■■□□ 2.17
CCDC42-203ENST00000581598 KIF7Q2M1P5 1343 aa28.63■■■□□ 2.17
CCDC42-203ENST00000581598 IFNL2Q8IZJ0 200 aa28.62■■■□□ 2.17
CCDC42-203ENST00000581598 PHKG2P15735 406 aa28.61■■■□□ 2.17
CCDC42-203ENST00000581598 ZEB1P37275 1124 aaPredicted RBP28.6■■■□□ 2.17
CCDC42-203ENST00000581598 PIGBQ92521 554 aa28.6■■■□□ 2.17
CCDC42-203ENST00000581598 AMER1Q5JTC6 1135 aaPredicted RBP28.58■■■□□ 2.17
CCDC42-203ENST00000581598 POLD1P28340 1107 aa28.56■■■□□ 2.16
CCDC42-203ENST00000581598 UTRNP46939 3433 aa28.56■■■□□ 2.16
CCDC42-203ENST00000581598 C4BP0C0L5 1744 aa28.55■■■□□ 2.16
CCDC42-203ENST00000581598 COL23A1Q86Y22 540 aaPredicted RBP28.54■■■□□ 2.16
CCDC42-203ENST00000581598 TMOD3Q9NYL9 352 aa28.54■■■□□ 2.16
CCDC42-203ENST00000581598 FLAD1Q8NFF5 587 aa28.53■■■□□ 2.16
CCDC42-203ENST00000581598 AMOTQ4VCS5 1084 aa28.52■■■□□ 2.16
CCDC42-203ENST00000581598 PER1O15534 1290 aaPredicted RBP28.51■■■□□ 2.15
CCDC42-203ENST00000581598 HSP90AB1P08238 724 aaKnown RBP28.51■■■□□ 2.15
CCDC42-203ENST00000581598 PLEKHO1Q53GL0 409 aaPredicted RBP28.51■■■□□ 2.15
CCDC42-203ENST00000581598 UBR3Q6ZT12 1888 aa28.5■■■□□ 2.15
CCDC42-203ENST00000581598 KDRP35968 1356 aa28.5■■■□□ 2.15
CCDC42-203ENST00000581598 LOC102724428A0A0B4J2F2 783 aa28.49■■■□□ 2.15
CCDC42-203ENST00000581598 ERVV-2B6SEH9 535 aa28.49■■■□□ 2.15
CCDC42-203ENST00000581598 SIK1P57059 783 aa28.49■■■□□ 2.15
CCDC42-203ENST00000581598 IL13P35225 146 aa28.48■■■□□ 2.15
CCDC42-203ENST00000581598 DCAF5Q96JK2 942 aa28.48■■■□□ 2.15
CCDC42-203ENST00000581598 ASAP1Q9ULH1 1129 aa28.47■■■□□ 2.15
CCDC42-203ENST00000581598 ZNF831Q5JPB2 1677 aa28.47■■■□□ 2.15
CCDC42-203ENST00000581598 MSH5O43196 834 aa28.46■■■□□ 2.15
CCDC42-203ENST00000581598 AEBP1Q8IUX7 1158 aa28.45■■■□□ 2.14
CCDC42-203ENST00000581598 AK7Q96M32 723 aa28.45■■■□□ 2.14
CCDC42-203ENST00000581598 ATG3Q9NT62 314 aa28.45■■■□□ 2.14
CCDC42-203ENST00000581598 NPC1L1Q9UHC9 1359 aa28.45■■■□□ 2.14
CCDC42-203ENST00000581598 SULT6B1Q6IMI4 303 aa28.44■■■□□ 2.14
CCDC42-203ENST00000581598 ZNF530Q6P9A1 599 aaPredicted RBP28.44■■■□□ 2.14
CCDC42-203ENST00000581598 KDM6AO15550 1401 aaPredicted RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms