RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
DDX42-213ENST00000581477 COG3Q96JB2 828 aa9.6□□□□□ -0.87
DDX42-213ENST00000581477 ALS2Q96Q42 1657 aa9.6□□□□□ -0.87
DDX42-213ENST00000581477 NHSL1Q5SYE7 1610 aa9.6□□□□□ -0.87
DDX42-213ENST00000581477 MARF1Q9Y4F3 1742 aaKnown RBP9.59□□□□□ -0.87
DDX42-213ENST00000581477 CCDC184Q52MB2 194 aa9.59□□□□□ -0.87
DDX42-213ENST00000581477 ABTB2Q8N961 1025 aa9.59□□□□□ -0.87
DDX42-213ENST00000581477 ROBO1Q9Y6N7 1651 aa9.58□□□□□ -0.88
DDX42-213ENST00000581477 AHDC1Q5TGY3 1603 aaPredicted RBP9.58□□□□□ -0.88
DDX42-213ENST00000581477 PSEN1P49768 467 aa9.58□□□□□ -0.88
DDX42-213ENST00000581477 NLRP6P59044 892 aa9.58□□□□□ -0.88
DDX42-213ENST00000581477 XPCQ01831 940 aaPredicted RBP9.58□□□□□ -0.88
DDX42-213ENST00000581477 DDX17Q92841 729 aaKnown RBP9.58□□□□□ -0.88
DDX42-213ENST00000581477 SPATA31A3Q5VYP0 1347 aa9.57□□□□□ -0.88
DDX42-213ENST00000581477 MRS2Q9HD23 443 aa9.57□□□□□ -0.88
DDX42-213ENST00000581477 INSRP06213 1382 aa9.57□□□□□ -0.88
DDX42-213ENST00000581477 USP19O94966 1318 aa9.56□□□□□ -0.88
DDX42-213ENST00000581477 TNS3Q68CZ2 1445 aa9.56□□□□□ -0.88
DDX42-213ENST00000581477 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
DDX42-213ENST00000581477 MAP2P11137 1827 aaKnown RBP9.56□□□□□ -0.88
DDX42-213ENST00000581477 ARHGEF10O15013 1369 aa9.56□□□□□ -0.88
DDX42-213ENST00000581477 PNPLA6Q8IY17 1366 aa9.56□□□□□ -0.88
DDX42-213ENST00000581477 MTHFSP49914 203 aa9.56□□□□□ -0.88
DDX42-213ENST00000581477 PNISRQ8TF01 805 aaKnown RBP9.56□□□□□ -0.88
DDX42-213ENST00000581477 POLKQ9UBT6 870 aa9.56□□□□□ -0.88
DDX42-213ENST00000581477 SLIT3O75094 1523 aa9.56□□□□□ -0.88
DDX42-213ENST00000581477 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
DDX42-213ENST00000581477 KCNH5Q8NCM2 988 aa9.55□□□□□ -0.88
DDX42-213ENST00000581477 MED1Q15648 1581 aaPredicted RBP9.54□□□□□ -0.88
DDX42-213ENST00000581477 KIF24Q5T7B8 1368 aa9.54□□□□□ -0.88
DDX42-213ENST00000581477 UBAP1LF5GYI3 381 aa9.54□□□□□ -0.88
DDX42-213ENST00000581477 FBLN1P23142 703 aa9.54□□□□□ -0.88
DDX42-213ENST00000581477 NUTM2GQ5VZR2 741 aa9.54□□□□□ -0.88
DDX42-213ENST00000581477 LRRC59Q96AG4 307 aaKnown RBP9.54□□□□□ -0.88
DDX42-213ENST00000581477 CRYBG1Q9Y4K1 1723 aa9.53□□□□□ -0.88
DDX42-213ENST00000581477 NFAT5O94916 1531 aa9.53□□□□□ -0.88
DDX42-213ENST00000581477 GCP02774 474 aa9.53□□□□□ -0.88
DDX42-213ENST00000581477 CFAP53Q96M91 514 aa9.53□□□□□ -0.88
DDX42-213ENST00000581477 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
DDX42-213ENST00000581477 CDK12Q9NYV4 1490 aaPredicted RBP9.53□□□□□ -0.88
DDX42-213ENST00000581477 PHRF1Q9P1Y6 1649 aaKnown RBP9.53□□□□□ -0.88
DDX42-213ENST00000581477 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.89
DDX42-213ENST00000581477 LMOD2Q6P5Q4 547 aa9.52□□□□□ -0.89
DDX42-213ENST00000581477 EMILIN1Q9Y6C2 1016 aa9.52□□□□□ -0.89
DDX42-213ENST00000581477 COL16A1Q07092 1604 aaPredicted RBP9.52□□□□□ -0.89
DDX42-213ENST00000581477 MAP3K19Q56UN5 1328 aa9.52□□□□□ -0.89
DDX42-213ENST00000581477 PHLPP1O60346 1717 aa9.51□□□□□ -0.89
DDX42-213ENST00000581477 PIP4K2BP78356 416 aa9.51□□□□□ -0.89
DDX42-213ENST00000581477 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
DDX42-213ENST00000581477 ARHGEF25Q86VW2 580 aa9.51□□□□□ -0.89
DDX42-213ENST00000581477 SHPRHQ149N8 1683 aa9.51□□□□□ -0.89
DDX42-213ENST00000581477 PEAK1Q9H792 1746 aa9.51□□□□□ -0.89
DDX42-213ENST00000581477 RTL1A6NKG5 1358 aa9.5□□□□□ -0.89
DDX42-213ENST00000581477 COL22A1Q8NFW1 1626 aaPredicted RBP9.5□□□□□ -0.89
DDX42-213ENST00000581477 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
DDX42-213ENST00000581477 LTN1O94822 1766 aa9.5□□□□□ -0.89
DDX42-213ENST00000581477 CPDO75976 1380 aa9.5□□□□□ -0.89
DDX42-213ENST00000581477 FLT4P35916 1363 aa9.5□□□□□ -0.89
DDX42-213ENST00000581477 ABCA3Q99758 1704 aa9.49□□□□□ -0.89
DDX42-213ENST00000581477 DIAPH1O60610 1272 aaKnown RBP9.49□□□□□ -0.89
DDX42-213ENST00000581477 IFFO2Q5TF58 517 aa9.49□□□□□ -0.89
DDX42-213ENST00000581477 FAM9BQ8IZU0 186 aa9.49□□□□□ -0.89
DDX42-213ENST00000581477 IP6K1Q92551 441 aa9.49□□□□□ -0.89
DDX42-213ENST00000581477 ABCC6O95255 1503 aa9.49□□□□□ -0.89
DDX42-213ENST00000581477 PPM1GO15355 546 aaPredicted RBP9.48□□□□□ -0.89
DDX42-213ENST00000581477 SOX12O15370 315 aa9.48□□□□□ -0.89
DDX42-213ENST00000581477 HOXC9P31274 260 aa9.48□□□□□ -0.89
DDX42-213ENST00000581477 IL13P35225 146 aa9.48□□□□□ -0.89
DDX42-213ENST00000581477 AMPHP49418 695 aa9.48□□□□□ -0.89
DDX42-213ENST00000581477 CABLES1Q8TDN4 633 aa9.48□□□□□ -0.89
DDX42-213ENST00000581477 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
DDX42-213ENST00000581477 ADAMTS8Q9UP79 889 aa9.48□□□□□ -0.89
DDX42-213ENST00000581477 NUDCQ9Y266 331 aa9.48□□□□□ -0.89
DDX42-213ENST00000581477 COL18A1P39060 1754 aa9.47□□□□□ -0.89
DDX42-213ENST00000581477 WDR43Q15061 677 aaKnown RBP eCLIP9.47□□□□□ -0.89
DDX42-213ENST00000581477 HSP90AB2PQ58FF8 381 aa9.47□□□□□ -0.89
DDX42-213ENST00000581477 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
DDX42-213ENST00000581477 BLMP54132 1417 aaPredicted RBP9.47□□□□□ -0.89
DDX42-213ENST00000581477 RGPD1P0DJD0 1748 aa9.46□□□□□ -0.89
DDX42-213ENST00000581477 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.9
DDX42-213ENST00000581477 EIF4A2Q14240 407 aaKnown RBP9.46□□□□□ -0.9
DDX42-213ENST00000581477 Q6ZNB5 142 aa9.46□□□□□ -0.9
DDX42-213ENST00000581477 FCHSD2O94868 740 aa9.45□□□□□ -0.9
DDX42-213ENST00000581477 AXIN2Q9Y2T1 843 aa9.45□□□□□ -0.9
DDX42-213ENST00000581477 KIAA0232Q92628 1395 aa9.45□□□□□ -0.9
DDX42-213ENST00000581477 U2AF1L5P0DN76 240 aaPredicted RBP9.44□□□□□ -0.9
DDX42-213ENST00000581477 U2AF1Q01081 240 aaKnown RBP eCLIP9.44□□□□□ -0.9
DDX42-213ENST00000581477 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
DDX42-213ENST00000581477 JCADQ9P266 1359 aa9.44□□□□□ -0.9
DDX42-213ENST00000581477 LMO7Q8WWI1 1683 aa9.44□□□□□ -0.9
DDX42-213ENST00000581477 RGPD5Q99666 1765 aa9.43□□□□□ -0.9
DDX42-213ENST00000581477 KDRP35968 1356 aa9.43□□□□□ -0.9
DDX42-213ENST00000581477 IGSF1Q8N6C5 1336 aa9.43□□□□□ -0.9
DDX42-213ENST00000581477 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
DDX42-213ENST00000581477 TMEM92Q6UXU6 159 aa9.43□□□□□ -0.9
DDX42-213ENST00000581477 NGEFQ8N5V2 710 aa9.43□□□□□ -0.9
DDX42-213ENST00000581477 RUNDC1Q96C34 613 aa9.43□□□□□ -0.9
DDX42-213ENST00000581477 PLEKHF1Q96S99 279 aa9.43□□□□□ -0.9
DDX42-213ENST00000581477 PNNQ9H307 717 aaKnown RBP9.43□□□□□ -0.9
DDX42-213ENST00000581477 PRDM11Q9NQV5 511 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms