RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 DDX54Q8TDD1 881 aaKnown RBP17.31■□□□□ 0.36
SENP3-204ENST00000580997 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
SENP3-204ENST00000580997 EIF4G2P78344 907 aaKnown RBP eCLIP17.3■□□□□ 0.36
SENP3-204ENST00000580997 SPON1Q9HCB6 807 aa17.3■□□□□ 0.36
SENP3-204ENST00000580997 FLT4P35916 1363 aa17.29■□□□□ 0.36
SENP3-204ENST00000580997 SLC15A2Q16348 729 aa17.29■□□□□ 0.36
SENP3-204ENST00000580997 ZCRB1Q8TBF4 217 aaKnown RBP17.29■□□□□ 0.36
SENP3-204ENST00000580997 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
SENP3-204ENST00000580997 MEGF6O75095 1541 aa17.28■□□□□ 0.36
SENP3-204ENST00000580997 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
SENP3-204ENST00000580997 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
SENP3-204ENST00000580997 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.36
SENP3-204ENST00000580997 STK32BQ9NY57 414 aa17.27■□□□□ 0.36
SENP3-204ENST00000580997 EMILIN1Q9Y6C2 1016 aa17.26■□□□□ 0.35
SENP3-204ENST00000580997 RGPD2P0DJD1 1756 aa17.25■□□□□ 0.35
SENP3-204ENST00000580997 CASZ1Q86V15 1759 aa17.25■□□□□ 0.35
SENP3-204ENST00000580997 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
SENP3-204ENST00000580997 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
SENP3-204ENST00000580997 LRRC4BQ9NT99 713 aa17.25■□□□□ 0.35
SENP3-204ENST00000580997 WASHC2AQ641Q2 1341 aa17.24■□□□□ 0.35
SENP3-204ENST00000580997 BTAF1O14981 1849 aa17.24■□□□□ 0.35
SENP3-204ENST00000580997 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
SENP3-204ENST00000580997 SLC27A3Q5K4L6 730 aa17.24■□□□□ 0.35
SENP3-204ENST00000580997 TATP17735 454 aaPredicted RBP17.23■□□□□ 0.35
SENP3-204ENST00000580997 NSD2O96028 1365 aa17.23■□□□□ 0.35
SENP3-204ENST00000580997 PAPPAQ13219 1627 aa17.22■□□□□ 0.35
SENP3-204ENST00000580997 SHANK3Q9BYB0 1731 aa17.22■□□□□ 0.35
SENP3-204ENST00000580997 CAPN15O75808 1086 aa17.22■□□□□ 0.35
SENP3-204ENST00000580997 PTGER2P43116 358 aa17.22■□□□□ 0.35
SENP3-204ENST00000580997 POLKQ9UBT6 870 aa17.22■□□□□ 0.35
SENP3-204ENST00000580997 NCAPD2Q15021 1401 aa17.21■□□□□ 0.35
SENP3-204ENST00000580997 ZBTB7AO95365 584 aa17.21■□□□□ 0.35
SENP3-204ENST00000580997 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
SENP3-204ENST00000580997 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
SENP3-204ENST00000580997 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
SENP3-204ENST00000580997 PANK3Q9H999 370 aa17.2■□□□□ 0.34
SENP3-204ENST00000580997 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
SENP3-204ENST00000580997 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
SENP3-204ENST00000580997 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
SENP3-204ENST00000580997 MTFR1LQ9H019 292 aa17.19■□□□□ 0.34
SENP3-204ENST00000580997 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
SENP3-204ENST00000580997 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
SENP3-204ENST00000580997 CYP27B1O15528 508 aa17.18■□□□□ 0.34
SENP3-204ENST00000580997 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
SENP3-204ENST00000580997 SGIP1Q9BQI5 828 aa17.18■□□□□ 0.34
SENP3-204ENST00000580997 DOT1LQ8TEK3 1739 aa17.17■□□□□ 0.34
SENP3-204ENST00000580997 EYA1Q99502 592 aa17.17■□□□□ 0.34
SENP3-204ENST00000580997 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
SENP3-204ENST00000580997 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
SENP3-204ENST00000580997 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
SENP3-204ENST00000580997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.34
SENP3-204ENST00000580997 KAT6BQ8WYB5 2073 aa17.16■□□□□ 0.34
SENP3-204ENST00000580997 MAP2P11137 1827 aaKnown RBP17.14■□□□□ 0.34
SENP3-204ENST00000580997 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
SENP3-204ENST00000580997 KCNQ4P56696 695 aa17.14■□□□□ 0.33
SENP3-204ENST00000580997 LY75O60449 1722 aa17.13■□□□□ 0.33
SENP3-204ENST00000580997 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
SENP3-204ENST00000580997 SLC16A10Q8TF71 515 aa17.13■□□□□ 0.33
SENP3-204ENST00000580997 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
SENP3-204ENST00000580997 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
SENP3-204ENST00000580997 UTRNP46939 3433 aa17.13■□□□□ 0.33
SENP3-204ENST00000580997 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
SENP3-204ENST00000580997 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
SENP3-204ENST00000580997 PKD1L3Q7Z443 1732 aa17.12■□□□□ 0.33
SENP3-204ENST00000580997 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
SENP3-204ENST00000580997 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
SENP3-204ENST00000580997 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
SENP3-204ENST00000580997 SYT17Q9BSW7 474 aa17.1■□□□□ 0.33
SENP3-204ENST00000580997 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
SENP3-204ENST00000580997 IGSF1Q8N6C5 1336 aa17.1■□□□□ 0.33
SENP3-204ENST00000580997 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
SENP3-204ENST00000580997 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
SENP3-204ENST00000580997 PIGBQ92521 554 aa17.09■□□□□ 0.33
SENP3-204ENST00000580997 FHDC1Q9C0D6 1143 aaPredicted RBP17.09■□□□□ 0.33
SENP3-204ENST00000580997 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
SENP3-204ENST00000580997 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
SENP3-204ENST00000580997 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
SENP3-204ENST00000580997 ARXQ96QS3 562 aa17.08■□□□□ 0.32
SENP3-204ENST00000580997 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
SENP3-204ENST00000580997 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
SENP3-204ENST00000580997 PHKG2P15735 406 aa17.07■□□□□ 0.32
SENP3-204ENST00000580997 IFNL2Q8IZJ0 200 aa17.07■□□□□ 0.32
SENP3-204ENST00000580997 PER1O15534 1290 aaPredicted RBP17.06■□□□□ 0.32
SENP3-204ENST00000580997 SP7Q8TDD2 431 aaPredicted RBP17.06■□□□□ 0.32
SENP3-204ENST00000580997 TOGARAM1Q9Y4F4 1720 aa17.06■□□□□ 0.32
SENP3-204ENST00000580997 COL24A1Q17RW2 1714 aa17.05■□□□□ 0.32
SENP3-204ENST00000580997 COL23A1Q86Y22 540 aaPredicted RBP17.04■□□□□ 0.32
SENP3-204ENST00000580997 ITGB4P16144 1822 aa17.03■□□□□ 0.32
SENP3-204ENST00000580997 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
SENP3-204ENST00000580997 POLD1P28340 1107 aa17.02■□□□□ 0.32
SENP3-204ENST00000580997 IL13P35225 146 aa17.02■□□□□ 0.32
SENP3-204ENST00000580997 FLAD1Q8NFF5 587 aa17.02■□□□□ 0.32
SENP3-204ENST00000580997 TUBGCP6Q96RT7 1819 aa17.02■□□□□ 0.31
SENP3-204ENST00000580997 YY1P25490 414 aa17.01■□□□□ 0.31
SENP3-204ENST00000580997 AMOTQ4VCS5 1084 aa17.01■□□□□ 0.31
SENP3-204ENST00000580997 PLEKHO1Q53GL0 409 aaPredicted RBP17.01■□□□□ 0.31
SENP3-204ENST00000580997 DCAF5Q96JK2 942 aa17.01■□□□□ 0.31
SENP3-204ENST00000580997 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
SENP3-204ENST00000580997 KDRP35968 1356 aa17.01■□□□□ 0.31
SENP3-204ENST00000580997 C5P01031 1676 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms