RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 PARP4Q9UKK3 1724 aaKnown RBP10.5□□□□□ -0.73
KPNB1-210ENST00000580573 SOX12O15370 315 aa10.49□□□□□ -0.73
KPNB1-210ENST00000580573 SLFN5Q08AF3 891 aa10.49□□□□□ -0.73
KPNB1-210ENST00000580573 AEBP1Q8IUX7 1158 aa10.49□□□□□ -0.73
KPNB1-210ENST00000580573 WDR63Q8IWG1 891 aa10.49□□□□□ -0.73
KPNB1-210ENST00000580573 PHACTR3Q96KR7 559 aa10.49□□□□□ -0.73
KPNB1-210ENST00000580573 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
KPNB1-210ENST00000580573 IL16Q14005 1332 aa10.49□□□□□ -0.73
KPNB1-210ENST00000580573 MAPK8IP3Q9UPT6 1336 aa10.49□□□□□ -0.73
KPNB1-210ENST00000580573 NWD2Q9ULI1 1742 aa10.49□□□□□ -0.73
KPNB1-210ENST00000580573 SIPA1L3O60292 1781 aaPredicted RBP10.49□□□□□ -0.73
KPNB1-210ENST00000580573 SHANK3Q9BYB0 1731 aa10.48□□□□□ -0.73
KPNB1-210ENST00000580573 HMOX1P09601 288 aa10.48□□□□□ -0.73
KPNB1-210ENST00000580573 MNX1P50219 401 aaPredicted RBP10.48□□□□□ -0.73
KPNB1-210ENST00000580573 GOLGA2Q08379 1002 aa10.48□□□□□ -0.73
KPNB1-210ENST00000580573 NFE2L2Q16236 605 aa10.48□□□□□ -0.73
KPNB1-210ENST00000580573 DUSP27Q5VZP5 1158 aa10.48□□□□□ -0.73
KPNB1-210ENST00000580573 SULT6B1Q6IMI4 303 aa10.48□□□□□ -0.73
KPNB1-210ENST00000580573 CDCA7LQ96GN5 454 aa10.48□□□□□ -0.73
KPNB1-210ENST00000580573 KIAA0232Q92628 1395 aa10.48□□□□□ -0.73
KPNB1-210ENST00000580573 COL5A2P05997 1499 aaPredicted RBP10.48□□□□□ -0.73
KPNB1-210ENST00000580573 RGL2O15211 777 aa10.47□□□□□ -0.73
KPNB1-210ENST00000580573 TOM1O60784 492 aa10.47□□□□□ -0.73
KPNB1-210ENST00000580573 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
KPNB1-210ENST00000580573 LMOD2Q6P5Q4 547 aa10.47□□□□□ -0.73
KPNB1-210ENST00000580573 LRRC59Q96AG4 307 aaKnown RBP10.47□□□□□ -0.73
KPNB1-210ENST00000580573 AXIN2Q9Y2T1 843 aa10.47□□□□□ -0.73
KPNB1-210ENST00000580573 E9PSI1 815 aa10.46□□□□□ -0.73
KPNB1-210ENST00000580573 CABLES1Q8TDN4 633 aa10.46□□□□□ -0.73
KPNB1-210ENST00000580573 SCN11AQ9UI33 1791 aa10.46□□□□□ -0.74
KPNB1-210ENST00000580573 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
KPNB1-210ENST00000580573 OVOS2A0A0G2JMS6 1433 aa10.45□□□□□ -0.74
KPNB1-210ENST00000580573 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
KPNB1-210ENST00000580573 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
KPNB1-210ENST00000580573 ANKRD24Q8TF21 1146 aa10.45□□□□□ -0.74
KPNB1-210ENST00000580573 FAM212AQ96EL1 285 aa10.45□□□□□ -0.74
KPNB1-210ENST00000580573 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
KPNB1-210ENST00000580573 RRP7AQ9Y3A4 280 aaKnown RBP10.45□□□□□ -0.74
KPNB1-210ENST00000580573 SALL2Q9Y467 1007 aaPredicted RBP10.45□□□□□ -0.74
KPNB1-210ENST00000580573 RIPK4P57078 832 aa10.44□□□□□ -0.74
KPNB1-210ENST00000580573 ZC3H6P61129 1189 aaKnown RBP10.44□□□□□ -0.74
KPNB1-210ENST00000580573 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
KPNB1-210ENST00000580573 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.44□□□□□ -0.74
KPNB1-210ENST00000580573 NEFMP07197 916 aa10.43□□□□□ -0.74
KPNB1-210ENST00000580573 ZNF853P0CG23 659 aa10.43□□□□□ -0.74
KPNB1-210ENST00000580573 LMOD3Q0VAK6 560 aa10.43□□□□□ -0.74
KPNB1-210ENST00000580573 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
KPNB1-210ENST00000580573 CRB1P82279 1406 aa10.42□□□□□ -0.74
KPNB1-210ENST00000580573 WDR17Q8IZU2 1322 aa10.42□□□□□ -0.74
KPNB1-210ENST00000580573 HTATSF1O43719 755 aaKnown RBP10.42□□□□□ -0.74
KPNB1-210ENST00000580573 GAS2L2Q8NHY3 880 aa10.42□□□□□ -0.74
KPNB1-210ENST00000580573 MEGF6O75095 1541 aa10.42□□□□□ -0.74
KPNB1-210ENST00000580573 CEMIPQ8WUJ3 1361 aa10.41□□□□□ -0.74
KPNB1-210ENST00000580573 CACNA1FO60840 1977 aa10.41□□□□□ -0.74
KPNB1-210ENST00000580573 CALD1Q05682 793 aaKnown RBP10.41□□□□□ -0.74
KPNB1-210ENST00000580573 NEUROD2Q15784 382 aa10.41□□□□□ -0.74
KPNB1-210ENST00000580573 MTHFSDQ2M296 383 aaKnown RBP10.41□□□□□ -0.74
KPNB1-210ENST00000580573 MRC1P22897 1456 aa10.41□□□□□ -0.74
KPNB1-210ENST00000580573 MAP3K5Q99683 1374 aa10.4□□□□□ -0.74
KPNB1-210ENST00000580573 FANCIQ9NVI1 1328 aa10.4□□□□□ -0.74
KPNB1-210ENST00000580573 SLIT2O94813 1529 aa10.4□□□□□ -0.74
KPNB1-210ENST00000580573 UBAP1LF5GYI3 381 aa10.4□□□□□ -0.74
KPNB1-210ENST00000580573 CT47B1P0C2W7 299 aaPredicted RBP10.4□□□□□ -0.74
KPNB1-210ENST00000580573 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
KPNB1-210ENST00000580573 LTV1Q96GA3 475 aaPredicted RBP10.4□□□□□ -0.74
KPNB1-210ENST00000580573 MYH16Q9H6N6 1097 aa10.4□□□□□ -0.74
KPNB1-210ENST00000580573 PRDM11Q9NQV5 511 aa10.4□□□□□ -0.74
KPNB1-210ENST00000580573 IFT57Q9NWB7 429 aa10.4□□□□□ -0.74
KPNB1-210ENST00000580573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.741e-6■□□□□ 10.8
KPNB1-210ENST00000580573 CHRNA2Q15822 529 aa10.39□□□□□ -0.75
KPNB1-210ENST00000580573 AMOTQ4VCS5 1084 aa10.39□□□□□ -0.75
KPNB1-210ENST00000580573 RCAN3Q9UKA8 241 aa10.39□□□□□ -0.75
KPNB1-210ENST00000580573 SUPT16HQ9Y5B9 1047 aaKnown RBP10.39□□□□□ -0.75
KPNB1-210ENST00000580573 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
KPNB1-210ENST00000580573 DISP2A7MBM2 1401 aa10.39□□□□□ -0.75
KPNB1-210ENST00000580573 JCADQ9P266 1359 aa10.39□□□□□ -0.75
KPNB1-210ENST00000580573 FAM83GA6ND36 823 aa10.38□□□□□ -0.75
KPNB1-210ENST00000580573 USHBP1Q8N6Y0 703 aa10.38□□□□□ -0.75
KPNB1-210ENST00000580573 CFAP44Q96MT7 982 aa10.38□□□□□ -0.75
KPNB1-210ENST00000580573 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.38□□□□□ -0.75
KPNB1-210ENST00000580573 LRP6O75581 1613 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 PAPPAQ13219 1627 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 ZBTB7CA1YPR0 619 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 CHL1O00533 1208 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 GNAI1P63096 354 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 ERICH6BQ5W0A0 696 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 CARD10Q9BWT7 1032 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 TOGARAM1Q9Y4F4 1720 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 UBR2Q8IWV8 1755 aa10.37□□□□□ -0.75
KPNB1-210ENST00000580573 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
KPNB1-210ENST00000580573 RASEFQ8IZ41 740 aa10.36□□□□□ -0.75
KPNB1-210ENST00000580573 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
KPNB1-210ENST00000580573 THUMPD2Q9BTF0 503 aaKnown RBP10.36□□□□□ -0.75
KPNB1-210ENST00000580573 BABAM1Q9NWV8 329 aa10.36□□□□□ -0.75
KPNB1-210ENST00000580573 N4BP2Q86UW6 1770 aaPredicted RBP10.36□□□□□ -0.75
KPNB1-210ENST00000580573 GLI3P10071 1580 aa10.35□□□□□ -0.75
KPNB1-210ENST00000580573 KDM6AO15550 1401 aaPredicted RBP10.35□□□□□ -0.75
KPNB1-210ENST00000580573 PIP4K2BP78356 416 aa10.35□□□□□ -0.75
KPNB1-210ENST00000580573 PLEKHO1Q53GL0 409 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms