RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 AKT1S1Q96B36 256 aa30.2■■■□□ 2.43
RBFOX3-204ENST00000580508 SYT17Q9BSW7 474 aa30.2■■■□□ 2.43
RBFOX3-204ENST00000580508 FHDC1Q9C0D6 1143 aaPredicted RBP30.2■■■□□ 2.43
RBFOX3-204ENST00000580508 GGNBP2Q9H3C7 697 aa30.2■■■□□ 2.43
RBFOX3-204ENST00000580508 COL24A1Q17RW2 1714 aa30.19■■■□□ 2.42
RBFOX3-204ENST00000580508 ZCRB1Q8TBF4 217 aaKnown RBP30.19■■■□□ 2.42
RBFOX3-204ENST00000580508 TUBGCP6Q96RT7 1819 aa30.18■■■□□ 2.42
RBFOX3-204ENST00000580508 NBPF6Q5VWK0 638 aa30.18■■■□□ 2.42
RBFOX3-204ENST00000580508 NBPF4Q96M43 638 aa30.18■■■□□ 2.42
RBFOX3-204ENST00000580508 PRIM1P49642 420 aaKnown RBP30.17■■■□□ 2.42
RBFOX3-204ENST00000580508 MAP3K5Q99683 1374 aa30.15■■■□□ 2.42
RBFOX3-204ENST00000580508 CDCA8Q53HL2 280 aa30.14■■■□□ 2.42
RBFOX3-204ENST00000580508 ARXQ96QS3 562 aa30.14■■■□□ 2.42
RBFOX3-204ENST00000580508 CGNL1Q0VF96 1302 aa30.14■■■□□ 2.42
RBFOX3-204ENST00000580508 INSRP06213 1382 aa30.13■■■□□ 2.41
RBFOX3-204ENST00000580508 KIF24Q5T7B8 1368 aa30.13■■■□□ 2.41
RBFOX3-204ENST00000580508 SLC16A10Q8TF71 515 aa30.12■■■□□ 2.41
RBFOX3-204ENST00000580508 SYTL4Q96C24 671 aaPredicted RBP30.12■■■□□ 2.41
RBFOX3-204ENST00000580508 SMG6Q86US8 1419 aaKnown RBP30.11■■■□□ 2.41
RBFOX3-204ENST00000580508 HSP90AB2PQ58FF8 381 aa30.1■■■□□ 2.41
RBFOX3-204ENST00000580508 USHBP1Q8N6Y0 703 aa30.1■■■□□ 2.41
RBFOX3-204ENST00000580508 PNPLA7Q6ZV29 1317 aa30.1■■■□□ 2.41
RBFOX3-204ENST00000580508 FLT4P35916 1363 aa30.09■■■□□ 2.41
RBFOX3-204ENST00000580508 KCNQ4P56696 695 aa30.09■■■□□ 2.41
RBFOX3-204ENST00000580508 CARD14Q9BXL6 1004 aa30.09■■■□□ 2.41
RBFOX3-204ENST00000580508 CHD4Q14839 1912 aa30.08■■■□□ 2.41
RBFOX3-204ENST00000580508 RAPGEF4Q8WZA2 1011 aa30.07■■■□□ 2.4
RBFOX3-204ENST00000580508 ANKRD26Q9UPS8 1709 aa30.05■■■□□ 2.4
RBFOX3-204ENST00000580508 TIMELESSQ9UNS1 1208 aa30.04■■■□□ 2.4
RBFOX3-204ENST00000580508 NSD3Q9BZ95 1437 aa30.04■■■□□ 2.4
RBFOX3-204ENST00000580508 TATP17735 454 aaPredicted RBP30.03■■■□□ 2.4
RBFOX3-204ENST00000580508 TFCP2L1Q9NZI6 479 aa30.03■■■□□ 2.4
RBFOX3-204ENST00000580508 UTRNP46939 3433 aa30.03■■■□□ 2.4
RBFOX3-204ENST00000580508 CCNL1Q9UK58 526 aaPredicted RBP30.02■■■□□ 2.4
RBFOX3-204ENST00000580508 NCAPD2Q15021 1401 aa30.02■■■□□ 2.4
RBFOX3-204ENST00000580508 PKD1L3Q7Z443 1732 aa30.02■■■□□ 2.4
RBFOX3-204ENST00000580508 PCDH11XQ9BZA7 1347 aa30■■■□□ 2.39
RBFOX3-204ENST00000580508 PCDH11YQ9BZA8 1340 aa30■■■□□ 2.39
RBFOX3-204ENST00000580508 TOGARAM1Q9Y4F4 1720 aa29.99■■■□□ 2.39
RBFOX3-204ENST00000580508 EMILIN1Q9Y6C2 1016 aa29.99■■■□□ 2.39
RBFOX3-204ENST00000580508 ITGB4P16144 1822 aa29.99■■■□□ 2.39
RBFOX3-204ENST00000580508 TAF1LQ8IZX4 1826 aa29.99■■■□□ 2.39
RBFOX3-204ENST00000580508 C5P01031 1676 aa29.98■■■□□ 2.39
RBFOX3-204ENST00000580508 MAP2P11137 1827 aaKnown RBP29.98■■■□□ 2.39
RBFOX3-204ENST00000580508 CYP27B1O15528 508 aa29.97■■■□□ 2.39
RBFOX3-204ENST00000580508 POLD1P28340 1107 aa29.97■■■□□ 2.39
RBFOX3-204ENST00000580508 ZNF784Q8NCA9 323 aaPredicted RBP29.95■■■□□ 2.39
RBFOX3-204ENST00000580508 CLSPNQ9HAW4 1339 aa29.95■■■□□ 2.38
RBFOX3-204ENST00000580508 COL23A1Q86Y22 540 aaPredicted RBP29.93■■■□□ 2.38
RBFOX3-204ENST00000580508 WASHC2AQ641Q2 1341 aa29.92■■■□□ 2.38
RBFOX3-204ENST00000580508 PALLDQ8WX93 1383 aa29.9■■■□□ 2.38
RBFOX3-204ENST00000580508 NKX1-1Q15270 411 aaPredicted RBP29.89■■■□□ 2.38
RBFOX3-204ENST00000580508 MPRIPQ6WCQ1 1025 aa29.88■■■□□ 2.37
RBFOX3-204ENST00000580508 GPR162Q16538 588 aa29.87■■■□□ 2.37
RBFOX3-204ENST00000580508 KLHL34Q8N239 644 aa29.87■■■□□ 2.37
RBFOX3-204ENST00000580508 C4BP0C0L5 1744 aa29.86■■■□□ 2.37
RBFOX3-204ENST00000580508 PPM1GO15355 546 aaPredicted RBP29.86■■■□□ 2.37
RBFOX3-204ENST00000580508 HMGB2P26583 209 aaKnown RBP29.86■■■□□ 2.37
RBFOX3-204ENST00000580508 NLGN2Q8NFZ4 835 aa29.86■■■□□ 2.37
RBFOX3-204ENST00000580508 EYA1Q99502 592 aa29.86■■■□□ 2.37
RBFOX3-204ENST00000580508 POLKQ9UBT6 870 aa29.85■■■□□ 2.37
RBFOX3-204ENST00000580508 SMARCC1Q92922 1105 aaPredicted RBP29.84■■■□□ 2.37
RBFOX3-204ENST00000580508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.84■■■□□ 2.37
RBFOX3-204ENST00000580508 UBR3Q6ZT12 1888 aa29.83■■■□□ 2.37
RBFOX3-204ENST00000580508 MSH5O43196 834 aa29.83■■■□□ 2.37
RBFOX3-204ENST00000580508 PIGBQ92521 554 aa29.83■■■□□ 2.37
RBFOX3-204ENST00000580508 SPG7Q9UQ90 795 aa29.83■■■□□ 2.37
RBFOX3-204ENST00000580508 FLAD1Q8NFF5 587 aa29.81■■■□□ 2.36
RBFOX3-204ENST00000580508 GOLGB1Q14789 3259 aaKnown RBP29.8■■■□□ 2.36
RBFOX3-204ENST00000580508 MSL1Q68DK7 614 aa29.79■■■□□ 2.36
RBFOX3-204ENST00000580508 PCGF6Q9BYE7 350 aa29.78■■■□□ 2.36
RBFOX3-204ENST00000580508 AMIGO3Q86WK7 504 aa29.77■■■□□ 2.36
RBFOX3-204ENST00000580508 PLEKHG2Q9H7P9 1386 aa29.77■■■□□ 2.36
RBFOX3-204ENST00000580508 EIF4A2Q14240 407 aaKnown RBP29.76■■■□□ 2.35
RBFOX3-204ENST00000580508 PHKG2P15735 406 aa29.74■■■□□ 2.35
RBFOX3-204ENST00000580508 YBX3P16989 372 aaKnown RBP eCLIP29.74■■■□□ 2.35
RBFOX3-204ENST00000580508 IFNL2Q8IZJ0 200 aa29.74■■■□□ 2.35
RBFOX3-204ENST00000580508 PELP1Q8IZL8 1130 aaKnown RBP29.74■■■□□ 2.35
RBFOX3-204ENST00000580508 AK7Q96M32 723 aa29.73■■■□□ 2.35
RBFOX3-204ENST00000580508 POLR3GLQ9BT43 218 aa29.73■■■□□ 2.35
RBFOX3-204ENST00000580508 LOC102724428A0A0B4J2F2 783 aa29.72■■■□□ 2.35
RBFOX3-204ENST00000580508 SIK1P57059 783 aa29.72■■■□□ 2.35
RBFOX3-204ENST00000580508 CD2APQ9Y5K6 639 aa29.72■■■□□ 2.35
RBFOX3-204ENST00000580508 HSPA5P11021 654 aaKnown RBP29.71■■■□□ 2.35
RBFOX3-204ENST00000580508 EIF4G2P78344 907 aaKnown RBP eCLIP29.71■■■□□ 2.35
RBFOX3-204ENST00000580508 TMOD3Q9NYL9 352 aa29.71■■■□□ 2.35
RBFOX3-204ENST00000580508 IGSF1Q8N6C5 1336 aa29.71■■■□□ 2.35
RBFOX3-204ENST00000580508 TNNT2P45379 298 aaPredicted RBP29.7■■■□□ 2.35
RBFOX3-204ENST00000580508 LINC00116Q8NCU8 138 aa29.7■■■□□ 2.35
RBFOX3-204ENST00000580508 ASAP1Q9ULH1 1129 aa29.7■■■□□ 2.35
RBFOX3-204ENST00000580508 GRIN3BO60391 1043 aa29.69■■■□□ 2.34
RBFOX3-204ENST00000580508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.68■■■□□ 2.34
RBFOX3-204ENST00000580508 SSFA2P28290 1259 aa29.68■■■□□ 2.34
RBFOX3-204ENST00000580508 SMIM5Q71RC9 77 aa29.68■■■□□ 2.34
RBFOX3-204ENST00000580508 PANK3Q9H999 370 aa29.68■■■□□ 2.34
RBFOX3-204ENST00000580508 ITPK1Q13572 414 aa29.67■■■□□ 2.34
RBFOX3-204ENST00000580508 ZNF831Q5JPB2 1677 aa29.66■■■□□ 2.34
RBFOX3-204ENST00000580508 ATG3Q9NT62 314 aa29.66■■■□□ 2.34
RBFOX3-204ENST00000580508 PHF14O94880 888 aa29.65■■■□□ 2.34
RBFOX3-204ENST00000580508 C1QTNF8P60827 252 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms