RNA–Protein interactions for RNA: ENST00000580499.1

RNF138-206, Transcript of ring finger protein 138, humanhuman

TSL 2

Gene RNF138, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138-206ENST00000580499 NBPF6Q5VWK0 638 aa20.49■□□□□ 0.87
RNF138-206ENST00000580499 NBPF4Q96M43 638 aa20.49■□□□□ 0.87
RNF138-206ENST00000580499 SMG6Q86US8 1419 aaKnown RBP20.48■□□□□ 0.87
RNF138-206ENST00000580499 POLD1P28340 1107 aa20.48■□□□□ 0.87
RNF138-206ENST00000580499 KCNQ4P56696 695 aa20.48■□□□□ 0.87
RNF138-206ENST00000580499 CDCA8Q53HL2 280 aa20.48■□□□□ 0.87
RNF138-206ENST00000580499 RAPGEF4Q8WZA2 1011 aa20.48■□□□□ 0.87
RNF138-206ENST00000580499 RGPD2P0DJD1 1756 aa20.48■□□□□ 0.87
RNF138-206ENST00000580499 CGNL1Q0VF96 1302 aa20.48■□□□□ 0.87
RNF138-206ENST00000580499 USP47Q96K76 1375 aa20.47■□□□□ 0.87
RNF138-206ENST00000580499 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
RNF138-206ENST00000580499 USHBP1Q8N6Y0 703 aa20.47■□□□□ 0.87
RNF138-206ENST00000580499 PNPLA7Q6ZV29 1317 aa20.47■□□□□ 0.87
RNF138-206ENST00000580499 MEGF6O75095 1541 aa20.47■□□□□ 0.87
RNF138-206ENST00000580499 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
RNF138-206ENST00000580499 TATP17735 454 aaPredicted RBP20.46■□□□□ 0.87
RNF138-206ENST00000580499 DOT1LQ8TEK3 1739 aa20.46■□□□□ 0.87
RNF138-206ENST00000580499 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
RNF138-206ENST00000580499 NSD2O96028 1365 aa20.45■□□□□ 0.86
RNF138-206ENST00000580499 TRIM26Q12899 539 aaPredicted RBP20.44■□□□□ 0.86
RNF138-206ENST00000580499 GPR162Q16538 588 aa20.44■□□□□ 0.86
RNF138-206ENST00000580499 ZNF784Q8NCA9 323 aaPredicted RBP20.44■□□□□ 0.86
RNF138-206ENST00000580499 QSER1Q2KHR3 1735 aa20.44■□□□□ 0.86
RNF138-206ENST00000580499 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
RNF138-206ENST00000580499 SHANK3Q9BYB0 1731 aa20.42■□□□□ 0.86
RNF138-206ENST00000580499 MSH5O43196 834 aa20.42■□□□□ 0.86
RNF138-206ENST00000580499 INSRP06213 1382 aa20.42■□□□□ 0.86
RNF138-206ENST00000580499 LY75O60449 1722 aa20.41■□□□□ 0.86
RNF138-206ENST00000580499 FLT4P35916 1363 aa20.41■□□□□ 0.86
RNF138-206ENST00000580499 CHD4Q14839 1912 aa20.4■□□□□ 0.86
RNF138-206ENST00000580499 PCDH11XQ9BZA7 1347 aa20.4■□□□□ 0.86
RNF138-206ENST00000580499 PCDH11YQ9BZA8 1340 aa20.4■□□□□ 0.86
RNF138-206ENST00000580499 KIF24Q5T7B8 1368 aa20.39■□□□□ 0.85
RNF138-206ENST00000580499 HMGB2P26583 209 aaKnown RBP20.39■□□□□ 0.85
RNF138-206ENST00000580499 PELP1Q8IZL8 1130 aaKnown RBP20.39■□□□□ 0.85
RNF138-206ENST00000580499 KIF20BQ96Q89 1820 aa20.39■□□□□ 0.85
RNF138-206ENST00000580499 TUBGCP6Q96RT7 1819 aa20.38■□□□□ 0.85
RNF138-206ENST00000580499 COL23A1Q86Y22 540 aaPredicted RBP20.37■□□□□ 0.85
RNF138-206ENST00000580499 CARD14Q9BXL6 1004 aa20.37■□□□□ 0.85
RNF138-206ENST00000580499 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
RNF138-206ENST00000580499 COL24A1Q17RW2 1714 aa20.36■□□□□ 0.85
RNF138-206ENST00000580499 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
RNF138-206ENST00000580499 EMILIN1Q9Y6C2 1016 aa20.35■□□□□ 0.85
RNF138-206ENST00000580499 NSD3Q9BZ95 1437 aa20.35■□□□□ 0.85
RNF138-206ENST00000580499 CYP27B1O15528 508 aa20.33■□□□□ 0.85
RNF138-206ENST00000580499 FLAD1Q8NFF5 587 aa20.33■□□□□ 0.85
RNF138-206ENST00000580499 NLGN2Q8NFZ4 835 aa20.33■□□□□ 0.85
RNF138-206ENST00000580499 PALLDQ8WX93 1383 aa20.33■□□□□ 0.84
RNF138-206ENST00000580499 SMARCC1Q92922 1105 aaPredicted RBP20.32■□□□□ 0.84
RNF138-206ENST00000580499 TIMELESSQ9UNS1 1208 aa20.32■□□□□ 0.84
RNF138-206ENST00000580499 MSL1Q68DK7 614 aa20.31■□□□□ 0.84
RNF138-206ENST00000580499 SPG7Q9UQ90 795 aa20.31■□□□□ 0.84
RNF138-206ENST00000580499 C5P01031 1676 aa20.29■□□□□ 0.84
RNF138-206ENST00000580499 WASHC2AQ641Q2 1341 aa20.28■□□□□ 0.84
RNF138-206ENST00000580499 GRIN3BO60391 1043 aa20.28■□□□□ 0.84
RNF138-206ENST00000580499 AK7Q96M32 723 aa20.28■□□□□ 0.84
RNF138-206ENST00000580499 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
RNF138-206ENST00000580499 NKX1-1Q15270 411 aaPredicted RBP20.27■□□□□ 0.84
RNF138-206ENST00000580499 PIGBQ92521 554 aa20.27■□□□□ 0.84
RNF138-206ENST00000580499 EYA1Q99502 592 aa20.27■□□□□ 0.84
RNF138-206ENST00000580499 C1QTNF8P60827 252 aa20.26■□□□□ 0.83
RNF138-206ENST00000580499 ITGB4P16144 1822 aa20.25■□□□□ 0.83
RNF138-206ENST00000580499 PKD1L3Q7Z443 1732 aa20.25■□□□□ 0.83
RNF138-206ENST00000580499 NCAPD2Q15021 1401 aa20.25■□□□□ 0.83
RNF138-206ENST00000580499 UTRNP46939 3433 aa20.25■□□□□ 0.83
RNF138-206ENST00000580499 TAF1LQ8IZX4 1826 aa20.25■□□□□ 0.83
RNF138-206ENST00000580499 YBX3P16989 372 aaKnown RBP eCLIP20.24■□□□□ 0.835e-18■■■□□ 18.9
RNF138-206ENST00000580499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.24■□□□□ 0.83
RNF138-206ENST00000580499 POLKQ9UBT6 870 aa20.24■□□□□ 0.83
RNF138-206ENST00000580499 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
RNF138-206ENST00000580499 MAP2P11137 1827 aaKnown RBP20.24■□□□□ 0.83
RNF138-206ENST00000580499 TOGARAM1Q9Y4F4 1720 aa20.24■□□□□ 0.83
RNF138-206ENST00000580499 SENP3-EIF4A1A0A087X0R7 540 aa20.23■□□□□ 0.83
RNF138-206ENST00000580499 PHF14O94880 888 aa20.23■□□□□ 0.83
RNF138-206ENST00000580499 IFNL2Q8IZJ0 200 aa20.23■□□□□ 0.83
RNF138-206ENST00000580499 TMOD3Q9NYL9 352 aa20.23■□□□□ 0.83
RNF138-206ENST00000580499 C4BP0C0L5 1744 aa20.22■□□□□ 0.83
RNF138-206ENST00000580499 LOC102724428A0A0B4J2F2 783 aa20.22■□□□□ 0.83
RNF138-206ENST00000580499 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
RNF138-206ENST00000580499 TNNT2P45379 298 aaPredicted RBP20.22■□□□□ 0.83
RNF138-206ENST00000580499 SIK1P57059 783 aa20.22■□□□□ 0.83
RNF138-206ENST00000580499 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
RNF138-206ENST00000580499 ANKRD26Q9UPS8 1709 aa20.21■□□□□ 0.83
RNF138-206ENST00000580499 CLSPNQ9HAW4 1339 aa20.21■□□□□ 0.83
RNF138-206ENST00000580499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.2■□□□□ 0.82
RNF138-206ENST00000580499 PHKG2P15735 406 aa20.2■□□□□ 0.82
RNF138-206ENST00000580499 SSFA2P28290 1259 aa20.19■□□□□ 0.82
RNF138-206ENST00000580499 EIF4A2Q14240 407 aaKnown RBP20.19■□□□□ 0.82
RNF138-206ENST00000580499 ASAP1Q9ULH1 1129 aa20.19■□□□□ 0.82
RNF138-206ENST00000580499 ATP6V1AP38606 617 aa20.18■□□□□ 0.82
RNF138-206ENST00000580499 SMIM5Q71RC9 77 aa20.18■□□□□ 0.82
RNF138-206ENST00000580499 AMIGO3Q86WK7 504 aa20.18■□□□□ 0.82
RNF138-206ENST00000580499 LINC00116Q8NCU8 138 aa20.18■□□□□ 0.82
RNF138-206ENST00000580499 UBR3Q6ZT12 1888 aa20.16■□□□□ 0.82
RNF138-206ENST00000580499 EIF4G2P78344 907 aaKnown RBP eCLIP20.16■□□□□ 0.82
RNF138-206ENST00000580499 GNPATO15228 680 aa20.15■□□□□ 0.82
RNF138-206ENST00000580499 ITPK1Q13572 414 aa20.15■□□□□ 0.82
RNF138-206ENST00000580499 ATG3Q9NT62 314 aa20.15■□□□□ 0.82
RNF138-206ENST00000580499 PANK3Q9H999 370 aa20.14■□□□□ 0.81
RNF138-206ENST00000580499 PLEKHG2Q9H7P9 1386 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms