RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 TNNT2P45379 298 aaPredicted RBP27.53■■■□□ 2
SMG8-204ENST00000580498 USHBP1Q8N6Y0 703 aa27.53■■■□□ 2
SMG8-204ENST00000580498 MORC1Q86VD1 984 aa27.52■■■□□ 2
SMG8-204ENST00000580498 KCNQ2O43526 872 aa27.51■■□□□ 1.99
SMG8-204ENST00000580498 TXNRD1Q16881 649 aa27.51■■□□□ 1.99
SMG8-204ENST00000580498 MEGF6O75095 1541 aa27.51■■□□□ 1.99
SMG8-204ENST00000580498 SYTL4Q96C24 671 aaPredicted RBP27.5■■□□□ 1.99
SMG8-204ENST00000580498 PCDH11XQ9BZA7 1347 aa27.49■■□□□ 1.99
SMG8-204ENST00000580498 PCDH11YQ9BZA8 1340 aa27.49■■□□□ 1.99
SMG8-204ENST00000580498 PTF1AQ7RTS3 328 aa27.49■■□□□ 1.99
SMG8-204ENST00000580498 STK32BQ9NY57 414 aa27.49■■□□□ 1.99
SMG8-204ENST00000580498 POLKQ9UBT6 870 aa27.49■■□□□ 1.99
SMG8-204ENST00000580498 KIF7Q2M1P5 1343 aa27.48■■□□□ 1.99
SMG8-204ENST00000580498 BTAF1O14981 1849 aa27.46■■□□□ 1.99
SMG8-204ENST00000580498 SPG7Q9UQ90 795 aa27.45■■□□□ 1.98
SMG8-204ENST00000580498 HMGB2P26583 209 aaKnown RBP27.44■■□□□ 1.98
SMG8-204ENST00000580498 PRIM1P49642 420 aaKnown RBP27.42■■□□□ 1.98
SMG8-204ENST00000580498 DOT1LQ8TEK3 1739 aa27.41■■□□□ 1.98
SMG8-204ENST00000580498 SPON1Q9HCB6 807 aa27.41■■□□□ 1.98
SMG8-204ENST00000580498 SHANK3Q9BYB0 1731 aa27.41■■□□□ 1.98
SMG8-204ENST00000580498 SLC27A3Q5K4L6 730 aa27.4■■□□□ 1.98
SMG8-204ENST00000580498 PROM2Q8N271 834 aa27.4■■□□□ 1.98
SMG8-204ENST00000580498 EYA1Q99502 592 aa27.39■■□□□ 1.98
SMG8-204ENST00000580498 EIF4A2Q14240 407 aaKnown RBP27.38■■□□□ 1.97
SMG8-204ENST00000580498 PPP1R1BQ9UD71 204 aaPredicted RBP27.38■■□□□ 1.97
SMG8-204ENST00000580498 SLC15A2Q16348 729 aa27.37■■□□□ 1.97
SMG8-204ENST00000580498 ANO8Q9HCE9 1232 aaPredicted RBP27.37■■□□□ 1.97
SMG8-204ENST00000580498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.37■■□□□ 1.97
SMG8-204ENST00000580498 PLEKHG2Q9H7P9 1386 aa27.36■■□□□ 1.97
SMG8-204ENST00000580498 NCAPD2Q15021 1401 aa27.36■■□□□ 1.97
SMG8-204ENST00000580498 PKD1L3Q7Z443 1732 aa27.34■■□□□ 1.97
SMG8-204ENST00000580498 SRCAPQ6ZRS2 3230 aa27.33■■□□□ 1.97
SMG8-204ENST00000580498 AMER1Q5JTC6 1135 aaPredicted RBP27.33■■□□□ 1.97
SMG8-204ENST00000580498 IFNL2Q8IZJ0 200 aa27.31■■□□□ 1.96
SMG8-204ENST00000580498 CYP27B1O15528 508 aa27.3■■□□□ 1.96
SMG8-204ENST00000580498 IGSF1Q8N6C5 1336 aa27.3■■□□□ 1.96
SMG8-204ENST00000580498 SMARCC1Q92922 1105 aaPredicted RBP27.29■■□□□ 1.96
SMG8-204ENST00000580498 CCNL1Q9UK58 526 aaPredicted RBP27.29■■□□□ 1.96
SMG8-204ENST00000580498 HSP90AB1P08238 724 aaKnown RBP27.28■■□□□ 1.96
SMG8-204ENST00000580498 PLEKHO1Q53GL0 409 aaPredicted RBP27.28■■□□□ 1.96
SMG8-204ENST00000580498 CC2D1BQ5T0F9 858 aaKnown RBP27.28■■□□□ 1.96
SMG8-204ENST00000580498 MPRIPQ6WCQ1 1025 aa27.28■■□□□ 1.96
SMG8-204ENST00000580498 AMOTQ4VCS5 1084 aa27.27■■□□□ 1.96
SMG8-204ENST00000580498 NKX1-1Q15270 411 aaPredicted RBP27.26■■□□□ 1.95
SMG8-204ENST00000580498 CASZ1Q86V15 1759 aa27.25■■□□□ 1.95
SMG8-204ENST00000580498 LY75O60449 1722 aa27.25■■□□□ 1.95
SMG8-204ENST00000580498 DCAF8L1A6NGE4 600 aa27.25■■□□□ 1.95
SMG8-204ENST00000580498 NPC1L1Q9UHC9 1359 aa27.24■■□□□ 1.95
SMG8-204ENST00000580498 PAPPAQ13219 1627 aa27.24■■□□□ 1.95
SMG8-204ENST00000580498 PER1O15534 1290 aaPredicted RBP27.24■■□□□ 1.95
SMG8-204ENST00000580498 ZBTB7AO95365 584 aa27.24■■□□□ 1.95
SMG8-204ENST00000580498 MTFR1LQ9H019 292 aa27.24■■□□□ 1.95
SMG8-204ENST00000580498 LRRC4BQ9NT99 713 aa27.24■■□□□ 1.95
SMG8-204ENST00000580498 TMOD3Q9NYL9 352 aa27.24■■□□□ 1.95
SMG8-204ENST00000580498 TFCP2L1Q9NZI6 479 aa27.24■■□□□ 1.95
SMG8-204ENST00000580498 PHKG2P15735 406 aa27.23■■□□□ 1.95
SMG8-204ENST00000580498 MTHFSP49914 203 aa27.22■■□□□ 1.95
SMG8-204ENST00000580498 C1orf141Q5JVX7 400 aa27.22■■□□□ 1.95
SMG8-204ENST00000580498 PALLDQ8WX93 1383 aa27.22■■□□□ 1.95
SMG8-204ENST00000580498 ITGB4P16144 1822 aa27.2■■□□□ 1.95
SMG8-204ENST00000580498 SULT6B1Q6IMI4 303 aa27.2■■□□□ 1.94
SMG8-204ENST00000580498 CNGB1Q14028 1251 aaPredicted RBP27.19■■□□□ 1.94
SMG8-204ENST00000580498 ZNF827Q17R98 1081 aa27.19■■□□□ 1.94
SMG8-204ENST00000580498 ZNF530Q6P9A1 599 aaPredicted RBP27.19■■□□□ 1.94
SMG8-204ENST00000580498 SLC16A10Q8TF71 515 aa27.19■■□□□ 1.94
SMG8-204ENST00000580498 ATF5Q9Y2D1 282 aaPredicted RBP27.19■■□□□ 1.94
SMG8-204ENST00000580498 AKT1S1Q96B36 256 aa27.18■■□□□ 1.94
SMG8-204ENST00000580498 DIAPH1O60610 1272 aaKnown RBP27.17■■□□□ 1.94
SMG8-204ENST00000580498 IL13P35225 146 aa27.17■■□□□ 1.94
SMG8-204ENST00000580498 DCAF5Q96JK2 942 aa27.17■■□□□ 1.94
SMG8-204ENST00000580498 QSER1Q2KHR3 1735 aa27.16■■□□□ 1.94
SMG8-204ENST00000580498 TOGARAM1Q9Y4F4 1720 aa27.16■■□□□ 1.94
SMG8-204ENST00000580498 PIGBQ92521 554 aa27.15■■□□□ 1.94
SMG8-204ENST00000580498 PDGFDQ9GZP0 370 aaPredicted RBP27.15■■□□□ 1.94
SMG8-204ENST00000580498 ERVV-2B6SEH9 535 aa27.14■■□□□ 1.94
SMG8-204ENST00000580498 MSH5O43196 834 aa27.14■■□□□ 1.94
SMG8-204ENST00000580498 POLD1P28340 1107 aa27.14■■□□□ 1.94
SMG8-204ENST00000580498 KCNQ4P56696 695 aa27.14■■□□□ 1.94
SMG8-204ENST00000580498 FLAD1Q8NFF5 587 aa27.14■■□□□ 1.94
SMG8-204ENST00000580498 CFAP53Q96M91 514 aa27.14■■□□□ 1.94
SMG8-204ENST00000580498 KDRP35968 1356 aa27.13■■□□□ 1.93
SMG8-204ENST00000580498 AEBP1Q8IUX7 1158 aa27.12■■□□□ 1.93
SMG8-204ENST00000580498 C5P01031 1676 aa27.11■■□□□ 1.93
SMG8-204ENST00000580498 CABP4P57796 275 aa27.11■■□□□ 1.93
SMG8-204ENST00000580498 AK7Q96M32 723 aa27.11■■□□□ 1.93
SMG8-204ENST00000580498 PNPLA7Q6ZV29 1317 aa27.09■■□□□ 1.93
SMG8-204ENST00000580498 LOC102724428A0A0B4J2F2 783 aa27.08■■□□□ 1.93
SMG8-204ENST00000580498 SIK1P57059 783 aa27.08■■□□□ 1.93
SMG8-204ENST00000580498 PTGER2P43116 358 aa27.07■■□□□ 1.92
SMG8-204ENST00000580498 ARXQ96QS3 562 aa27.07■■□□□ 1.92
SMG8-204ENST00000580498 U2SURPO15042 1029 aaKnown RBP27.06■■□□□ 1.92
SMG8-204ENST00000580498 HMOX1P09601 288 aa27.06■■□□□ 1.92
SMG8-204ENST00000580498 TAF1LQ8IZX4 1826 aa27.05■■□□□ 1.92
SMG8-204ENST00000580498 ATP6V1AP38606 617 aa27.05■■□□□ 1.92
SMG8-204ENST00000580498 AKAP4Q5JQC9 854 aa27.05■■□□□ 1.92
SMG8-204ENST00000580498 ASAP1Q9ULH1 1129 aa27.05■■□□□ 1.92
SMG8-204ENST00000580498 NUDCQ9Y266 331 aa27.05■■□□□ 1.92
SMG8-204ENST00000580498 TUBGCP6Q96RT7 1819 aa27.04■■□□□ 1.92
SMG8-204ENST00000580498 C4BP0C0L5 1744 aa27.02■■□□□ 1.92
SMG8-204ENST00000580498 ATG3Q9NT62 314 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms