RNA–Protein interactions for RNA: ENST00000580497.1

PMP22-207, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-207ENST00000580497 SPATA31A1Q5TZJ5 1347 aa11.02□□□□□ -0.65
PMP22-207ENST00000580497 SPATA31A5Q5VU36 1347 aa11.02□□□□□ -0.65
PMP22-207ENST00000580497 SPATA31A7Q8IWB4 1347 aa11.02□□□□□ -0.65
PMP22-207ENST00000580497 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
PMP22-207ENST00000580497 SIPA1L3O60292 1781 aaPredicted RBP11.01□□□□□ -0.65
PMP22-207ENST00000580497 NEUROD2Q15784 382 aa11.01□□□□□ -0.65
PMP22-207ENST00000580497 VPS72Q15906 364 aa11.01□□□□□ -0.65
PMP22-207ENST00000580497 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
PMP22-207ENST00000580497 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
PMP22-207ENST00000580497 TOGARAM1Q9Y4F4 1720 aa11.01□□□□□ -0.65
PMP22-207ENST00000580497 ATRNO75882 1429 aa11.01□□□□□ -0.65
PMP22-207ENST00000580497 BRWD3Q6RI45 1802 aa11□□□□□ -0.65
PMP22-207ENST00000580497 RIPK4P57078 832 aa11□□□□□ -0.65
PMP22-207ENST00000580497 RAPGEF4Q8WZA2 1011 aa11□□□□□ -0.65
PMP22-207ENST00000580497 ZNF521Q96K83 1311 aa11□□□□□ -0.65
PMP22-207ENST00000580497 IL2RBP14784 551 aa10.99□□□□□ -0.65
PMP22-207ENST00000580497 TATP17735 454 aaPredicted RBP10.99□□□□□ -0.65
PMP22-207ENST00000580497 ILDR1Q86SU0 546 aaPredicted RBP10.99□□□□□ -0.65
PMP22-207ENST00000580497 ZBED9Q6R2W3 1325 aa10.99□□□□□ -0.65
PMP22-207ENST00000580497 ITGB4P16144 1822 aa10.98□□□□□ -0.65
PMP22-207ENST00000580497 NEFMP07197 916 aa10.98□□□□□ -0.65
PMP22-207ENST00000580497 PLEKHO1Q53GL0 409 aaPredicted RBP10.98□□□□□ -0.65
PMP22-207ENST00000580497 CCDC9Q9Y3X0 531 aaKnown RBP10.98□□□□□ -0.65
PMP22-207ENST00000580497 PLEKHG2Q9H7P9 1386 aa10.98□□□□□ -0.65
PMP22-207ENST00000580497 DCTN1Q14203 1278 aa10.97□□□□□ -0.65
PMP22-207ENST00000580497 CCDC27Q2M243 656 aa10.97□□□□□ -0.65
PMP22-207ENST00000580497 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
PMP22-207ENST00000580497 ZNF530Q6P9A1 599 aaPredicted RBP10.97□□□□□ -0.65
PMP22-207ENST00000580497 BARGINQ6ZT62 677 aa10.97□□□□□ -0.65
PMP22-207ENST00000580497 WWC1Q8IX03 1113 aa10.97□□□□□ -0.65
PMP22-207ENST00000580497 GAS2L2Q8NHY3 880 aa10.97□□□□□ -0.65
PMP22-207ENST00000580497 THUMPD2Q9BTF0 503 aaKnown RBP10.97□□□□□ -0.65
PMP22-207ENST00000580497 RGS17Q9UGC6 210 aaPredicted RBP10.97□□□□□ -0.65
PMP22-207ENST00000580497 THRAP3Q9Y2W1 955 aaKnown RBP10.97□□□□□ -0.65
PMP22-207ENST00000580497 DOT1LQ8TEK3 1739 aa10.97□□□□□ -0.65
PMP22-207ENST00000580497 MAP3K5Q99683 1374 aa10.96□□□□□ -0.65
PMP22-207ENST00000580497 CYP27B1O15528 508 aa10.96□□□□□ -0.65
PMP22-207ENST00000580497 FAM98CQ17RN3 349 aaKnown RBP10.96□□□□□ -0.65
PMP22-207ENST00000580497 AMOTQ4VCS5 1084 aa10.96□□□□□ -0.65
PMP22-207ENST00000580497 MCM10Q7L590 875 aa10.96□□□□□ -0.65
PMP22-207ENST00000580497 GJD4Q96KN9 370 aaPredicted RBP10.96□□□□□ -0.65
PMP22-207ENST00000580497 QTRT2Q9H974 415 aaKnown RBP10.96□□□□□ -0.65
PMP22-207ENST00000580497 SPINK5Q9NQ38 1064 aaPredicted RBP10.96□□□□□ -0.65
PMP22-207ENST00000580497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.96□□□□□ -0.65
PMP22-207ENST00000580497 TRPC5Q9UL62 973 aaPredicted RBP10.96□□□□□ -0.65
PMP22-207ENST00000580497 KDM3BQ7LBC6 1761 aa10.95□□□□□ -0.66
PMP22-207ENST00000580497 KDM6AO15550 1401 aaPredicted RBP10.95□□□□□ -0.66
PMP22-207ENST00000580497 TNS2Q63HR2 1409 aa10.95□□□□□ -0.66
PMP22-207ENST00000580497 ZCRB1Q8TBF4 217 aaKnown RBP10.95□□□□□ -0.66
PMP22-207ENST00000580497 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
PMP22-207ENST00000580497 LGR6Q9HBX8 967 aa10.95□□□□□ -0.66
PMP22-207ENST00000580497 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
PMP22-207ENST00000580497 SBF2Q86WG5 1849 aa10.94□□□□□ -0.66
PMP22-207ENST00000580497 GNAT3A8MTJ3 354 aa10.94□□□□□ -0.66
PMP22-207ENST00000580497 PHKG2P15735 406 aa10.94□□□□□ -0.66
PMP22-207ENST00000580497 AKAP4Q5JQC9 854 aa10.94□□□□□ -0.66
PMP22-207ENST00000580497 NGEFQ8N5V2 710 aa10.94□□□□□ -0.66
PMP22-207ENST00000580497 IL17REQ8NFR9 667 aa10.94□□□□□ -0.66
PMP22-207ENST00000580497 PCDH11XQ9BZA7 1347 aa10.93□□□□□ -0.66
PMP22-207ENST00000580497 PCDH11YQ9BZA8 1340 aa10.93□□□□□ -0.66
PMP22-207ENST00000580497 MPRIPQ6WCQ1 1025 aa10.93□□□□□ -0.66
PMP22-207ENST00000580497 IFNL2Q8IZJ0 200 aa10.93□□□□□ -0.66
PMP22-207ENST00000580497 CDCA7Q9BWT1 371 aaPredicted RBP10.93□□□□□ -0.66
PMP22-207ENST00000580497 CEMIPQ8WUJ3 1361 aa10.92□□□□□ -0.66
PMP22-207ENST00000580497 PAPPAQ13219 1627 aa10.92□□□□□ -0.66
PMP22-207ENST00000580497 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
PMP22-207ENST00000580497 ONECUT3O60422 494 aaPredicted RBP10.92□□□□□ -0.66
PMP22-207ENST00000580497 LMOD3Q0VAK6 560 aa10.92□□□□□ -0.66
PMP22-207ENST00000580497 C1orf141Q5JVX7 400 aa10.92□□□□□ -0.66
PMP22-207ENST00000580497 ZNF772Q68DY9 489 aaPredicted RBP10.92□□□□□ -0.66
PMP22-207ENST00000580497 WDR63Q8IWG1 891 aa10.92□□□□□ -0.66
PMP22-207ENST00000580497 DDX54Q8TDD1 881 aaKnown RBP10.92□□□□□ -0.66
PMP22-207ENST00000580497 MRC1P22897 1456 aa10.92□□□□□ -0.66
PMP22-207ENST00000580497 EXOC5O00471 708 aa10.91□□□□□ -0.66
PMP22-207ENST00000580497 RNMTO43148 476 aaKnown RBP10.91□□□□□ -0.66
PMP22-207ENST00000580497 GOLGA2Q08379 1002 aa10.91□□□□□ -0.66
PMP22-207ENST00000580497 SLFN5Q08AF3 891 aa10.91□□□□□ -0.66
PMP22-207ENST00000580497 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
PMP22-207ENST00000580497 DDB1Q16531 1140 aa10.91□□□□□ -0.66
PMP22-207ENST00000580497 POTEAQ6S8J7 498 aa10.91□□□□□ -0.66
PMP22-207ENST00000580497 TRMT2AQ8IZ69 625 aaKnown RBP10.91□□□□□ -0.66
PMP22-207ENST00000580497 UBR2Q8IWV8 1755 aa10.9□□□□□ -0.66
PMP22-207ENST00000580497 ZNF853P0CG23 659 aa10.9□□□□□ -0.66
PMP22-207ENST00000580497 PDE3BQ13370 1112 aa10.9□□□□□ -0.66
PMP22-207ENST00000580497 MARCH10Q8NA82 808 aaPredicted RBP10.9□□□□□ -0.66
PMP22-207ENST00000580497 RTF1Q92541 710 aaKnown RBP10.9□□□□□ -0.66
PMP22-207ENST00000580497 IL16Q14005 1332 aa10.89□□□□□ -0.67
PMP22-207ENST00000580497 C5P01031 1676 aa10.89□□□□□ -0.67
PMP22-207ENST00000580497 DUSP27Q5VZP5 1158 aa10.89□□□□□ -0.67
PMP22-207ENST00000580497 SEPT12Q8IYM1 358 aa10.89□□□□□ -0.67
PMP22-207ENST00000580497 TSR2Q969E8 191 aaKnown RBP10.89□□□□□ -0.67
PMP22-207ENST00000580497 DCAF5Q96JK2 942 aa10.89□□□□□ -0.67
PMP22-207ENST00000580497 LAS1LQ9Y4W2 734 aaKnown RBP10.89□□□□□ -0.67
PMP22-207ENST00000580497 NHSQ6T4R5 1651 aa10.89□□□□□ -0.67
PMP22-207ENST00000580497 A0A0G2JS52 829 aa10.88□□□□□ -0.67
PMP22-207ENST00000580497 RBM6P78332 1123 aaKnown RBP10.88□□□□□ -0.67
PMP22-207ENST00000580497 MYT1Q01538 1121 aa10.88□□□□□ -0.67
PMP22-207ENST00000580497 MIS18AQ9NYP9 233 aa10.88□□□□□ -0.67
PMP22-207ENST00000580497 KAT6BQ8WYB5 2073 aa10.88□□□□□ -0.67
PMP22-207ENST00000580497 FANCIQ9NVI1 1328 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms