RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 NFAT5O94916 1531 aa20.69■□□□□ 0.9
CSNK1D-213ENST00000580446 KCNH5Q8NCM2 988 aa20.69■□□□□ 0.9
CSNK1D-213ENST00000580446 RBM46Q8TBY0 533 aaKnown RBP20.69■□□□□ 0.9
CSNK1D-213ENST00000580446 AMIGO3Q86WK7 504 aa20.68■□□□□ 0.9
CSNK1D-213ENST00000580446 C16orf71Q8IYS4 520 aaPredicted RBP20.68■□□□□ 0.9
CSNK1D-213ENST00000580446 ERBB3P21860 1342 aa20.68■□□□□ 0.9
CSNK1D-213ENST00000580446 TTC21BQ7Z4L5 1316 aa20.66■□□□□ 0.9
CSNK1D-213ENST00000580446 ANKRD24Q8TF21 1146 aa20.65■□□□□ 0.9
CSNK1D-213ENST00000580446 ANKRD36BQ8N2N9 1353 aa20.63■□□□□ 0.89
CSNK1D-213ENST00000580446 PHF14O94880 888 aa20.63■□□□□ 0.89
CSNK1D-213ENST00000580446 LY75O60449 1722 aa20.62■□□□□ 0.89
CSNK1D-213ENST00000580446 ARHGAP27Q6ZUM4 889 aa20.62■□□□□ 0.89
CSNK1D-213ENST00000580446 BCS1LQ9Y276 419 aa20.62■□□□□ 0.89
CSNK1D-213ENST00000580446 CICQ96RK0 1608 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-213ENST00000580446 DOT1LQ8TEK3 1739 aa20.61■□□□□ 0.89
CSNK1D-213ENST00000580446 NBPF1Q3BBV0 1214 aa20.61■□□□□ 0.89
CSNK1D-213ENST00000580446 QRICH2Q9H0J4 1663 aa20.61■□□□□ 0.89
CSNK1D-213ENST00000580446 FSTL1Q12841 308 aa20.6■□□□□ 0.89
CSNK1D-213ENST00000580446 LTV1Q96GA3 475 aaPredicted RBP20.6■□□□□ 0.89
CSNK1D-213ENST00000580446 KCPQ6ZWJ8 1503 aa20.58■□□□□ 0.89
CSNK1D-213ENST00000580446 CENPJQ9HC77 1338 aaPredicted RBP20.58■□□□□ 0.89
CSNK1D-213ENST00000580446 USP47Q96K76 1375 aa20.58■□□□□ 0.88
CSNK1D-213ENST00000580446 C9orf131Q5VYM1 1079 aa20.57■□□□□ 0.88
CSNK1D-213ENST00000580446 RRAGCQ9HB90 399 aa20.57■□□□□ 0.88
CSNK1D-213ENST00000580446 PXDNLA1KZ92 1463 aa20.56■□□□□ 0.88
CSNK1D-213ENST00000580446 A0A0G2JLW4 131 aa20.56■□□□□ 0.88
CSNK1D-213ENST00000580446 FAM161AQ3B820 660 aa20.56■□□□□ 0.88
CSNK1D-213ENST00000580446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.55■□□□□ 0.88
CSNK1D-213ENST00000580446 C5P01031 1676 aa20.52■□□□□ 0.88
CSNK1D-213ENST00000580446 USP54Q70EL1 1684 aa20.52■□□□□ 0.88
CSNK1D-213ENST00000580446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.52■□□□□ 0.88
CSNK1D-213ENST00000580446 NME9Q86XW9 330 aa20.52■□□□□ 0.88
CSNK1D-213ENST00000580446 FLAD1Q8NFF5 587 aa20.52■□□□□ 0.88
CSNK1D-213ENST00000580446 AK7Q96M32 723 aa20.52■□□□□ 0.88
CSNK1D-213ENST00000580446 PCDH10Q9P2E7 1040 aa20.51■□□□□ 0.87
CSNK1D-213ENST00000580446 TTC21AQ8NDW8 1320 aa20.51■□□□□ 0.87
CSNK1D-213ENST00000580446 TOGARAM1Q9Y4F4 1720 aa20.5■□□□□ 0.87
CSNK1D-213ENST00000580446 FCHSD2O94868 740 aa20.49■□□□□ 0.87
CSNK1D-213ENST00000580446 SMC1BQ8NDV3 1235 aa20.49■□□□□ 0.87
CSNK1D-213ENST00000580446 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
CSNK1D-213ENST00000580446 PALLDQ8WX93 1383 aa20.48■□□□□ 0.87
CSNK1D-213ENST00000580446 MMP10P09238 476 aa20.47■□□□□ 0.87
CSNK1D-213ENST00000580446 DPEP1P16444 411 aa20.47■□□□□ 0.87
CSNK1D-213ENST00000580446 ZCRB1Q8TBF4 217 aaKnown RBP20.47■□□□□ 0.87
CSNK1D-213ENST00000580446 MEGF6O75095 1541 aa20.47■□□□□ 0.87
CSNK1D-213ENST00000580446 FOXN1O15353 648 aa20.46■□□□□ 0.87
CSNK1D-213ENST00000580446 RNF181Q9P0P0 153 aa20.46■□□□□ 0.87
CSNK1D-213ENST00000580446 KDM2BQ8NHM5 1336 aa20.46■□□□□ 0.87
CSNK1D-213ENST00000580446 N4BP2Q86UW6 1770 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-213ENST00000580446 C4BP0C0L5 1744 aa20.45■□□□□ 0.86
CSNK1D-213ENST00000580446 ZNF692Q9BU19 519 aaPredicted RBP20.45■□□□□ 0.86
CSNK1D-213ENST00000580446 KIAA1551Q9HCM1 1747 aa20.44■□□□□ 0.86
CSNK1D-213ENST00000580446 LTN1O94822 1766 aa20.44■□□□□ 0.86
CSNK1D-213ENST00000580446 PLEKHG2Q9H7P9 1386 aa20.44■□□□□ 0.86
CSNK1D-213ENST00000580446 MPRIPQ6WCQ1 1025 aa20.43■□□□□ 0.86
CSNK1D-213ENST00000580446 MKRN1Q9UHC7 482 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-213ENST00000580446 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
CSNK1D-213ENST00000580446 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
CSNK1D-213ENST00000580446 STAC3Q96MF2 364 aa20.41■□□□□ 0.86
CSNK1D-213ENST00000580446 EVC2Q86UK5 1308 aa20.41■□□□□ 0.86
CSNK1D-213ENST00000580446 USP31Q70CQ4 1352 aa20.4■□□□□ 0.86
CSNK1D-213ENST00000580446 PKD1L3Q7Z443 1732 aa20.39■□□□□ 0.85
CSNK1D-213ENST00000580446 C10orf71Q711Q0 1435 aa20.38■□□□□ 0.85
CSNK1D-213ENST00000580446 GNPATO15228 680 aa20.38■□□□□ 0.85
CSNK1D-213ENST00000580446 TGFB2P61812 414 aa20.38■□□□□ 0.85
CSNK1D-213ENST00000580446 TAF1LQ8IZX4 1826 aa20.38■□□□□ 0.85
CSNK1D-213ENST00000580446 FBLN1P23142 703 aa20.37■□□□□ 0.85
CSNK1D-213ENST00000580446 IP6K1Q92551 441 aa20.37■□□□□ 0.85
CSNK1D-213ENST00000580446 UBR3Q6ZT12 1888 aa20.37■□□□□ 0.85
CSNK1D-213ENST00000580446 FAM208AQ9UK61 1670 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-213ENST00000580446 SSFA2P28290 1259 aa20.36■□□□□ 0.85
CSNK1D-213ENST00000580446 KCNA3P22001 575 aa20.35■□□□□ 0.85
CSNK1D-213ENST00000580446 ABHD8Q96I13 439 aa20.35■□□□□ 0.85
CSNK1D-213ENST00000580446 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
CSNK1D-213ENST00000580446 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
CSNK1D-213ENST00000580446 RASSF7Q02833 373 aa20.34■□□□□ 0.85
CSNK1D-213ENST00000580446 KIAA1210Q9ULL0 1709 aa20.33■□□□□ 0.85
CSNK1D-213ENST00000580446 TNRC6CQ9HCJ0 1690 aaKnown RBP20.33■□□□□ 0.85
CSNK1D-213ENST00000580446 ITPK1Q13572 414 aa20.32■□□□□ 0.84
CSNK1D-213ENST00000580446 NSD3Q9BZ95 1437 aa20.31■□□□□ 0.84
CSNK1D-213ENST00000580446 LBX1P52954 281 aa20.31■□□□□ 0.84
CSNK1D-213ENST00000580446 DCAF5Q96JK2 942 aa20.31■□□□□ 0.84
CSNK1D-213ENST00000580446 PRDM10Q9NQV6 1147 aa20.31■□□□□ 0.84
CSNK1D-213ENST00000580446 KIF13BQ9NQT8 1826 aa20.3■□□□□ 0.84
CSNK1D-213ENST00000580446 MLLT1Q03111 559 aaPredicted RBP20.3■□□□□ 0.84
CSNK1D-213ENST00000580446 NBPF6Q5VWK0 638 aa20.3■□□□□ 0.84
CSNK1D-213ENST00000580446 NBPF4Q96M43 638 aa20.3■□□□□ 0.84
CSNK1D-213ENST00000580446 MON2Q7Z3U7 1717 aa20.3■□□□□ 0.84
CSNK1D-213ENST00000580446 RGPD2P0DJD1 1756 aa20.29■□□□□ 0.84
CSNK1D-213ENST00000580446 CHRNA5P30532 468 aa20.29■□□□□ 0.84
CSNK1D-213ENST00000580446 HOXC9P31274 260 aa20.29■□□□□ 0.84
CSNK1D-213ENST00000580446 PIGBQ92521 554 aa20.29■□□□□ 0.84
CSNK1D-213ENST00000580446 CCDC87Q9NVE4 849 aa20.29■□□□□ 0.84
CSNK1D-213ENST00000580446 MAP3K19Q56UN5 1328 aa20.28■□□□□ 0.84
CSNK1D-213ENST00000580446 LOC102724428A0A0B4J2F2 783 aa20.28■□□□□ 0.84
CSNK1D-213ENST00000580446 SIK1P57059 783 aa20.28■□□□□ 0.84
CSNK1D-213ENST00000580446 DALRD3Q5D0E6 543 aaKnown RBP20.28■□□□□ 0.84
CSNK1D-213ENST00000580446 CD163L1Q9NR16 1453 aa20.28■□□□□ 0.84
CSNK1D-213ENST00000580446 VEGFAP15692 232 aaPredicted RBP20.27■□□□□ 0.84
CSNK1D-213ENST00000580446 CTCFP49711 727 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms