RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 TERF2IPQ9NYB0 399 aa12.02□□□□□ -0.49
SENP3-203ENST00000580231 RNF123Q5XPI4 1314 aa12.02□□□□□ -0.49
SENP3-203ENST00000580231 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
SENP3-203ENST00000580231 NSD3Q9BZ95 1437 aa12.02□□□□□ -0.49
SENP3-203ENST00000580231 ADAMTS8Q9UP79 889 aa12.01□□□□□ -0.49
SENP3-203ENST00000580231 TMEM2Q9UHN6 1383 aa12.01□□□□□ -0.49
SENP3-203ENST00000580231 TRIM6-TRIM34B2RNG4 842 aa12□□□□□ -0.49
SENP3-203ENST00000580231 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
SENP3-203ENST00000580231 SPDYE16A6NNV3 312 aaPredicted RBP11.99□□□□□ -0.49
SENP3-203ENST00000580231 PAXIP1Q6ZW49 1069 aaPredicted RBP11.99□□□□□ -0.49
SENP3-203ENST00000580231 CFAP44Q96MT7 982 aa11.99□□□□□ -0.49
SENP3-203ENST00000580231 PPP4R2Q9NY27 417 aa11.99□□□□□ -0.49
SENP3-203ENST00000580231 FAM135BQ49AJ0 1406 aa11.99□□□□□ -0.49
SENP3-203ENST00000580231 SETD1AO15047 1707 aaKnown RBP11.99□□□□□ -0.49
SENP3-203ENST00000580231 UBR1Q8IWV7 1749 aa11.98□□□□□ -0.49
SENP3-203ENST00000580231 TECPR2O15040 1411 aa11.98□□□□□ -0.49
SENP3-203ENST00000580231 MINK1Q8N4C8 1332 aaPredicted RBP11.98□□□□□ -0.49
SENP3-203ENST00000580231 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
SENP3-203ENST00000580231 NBR1Q14596 966 aa11.98□□□□□ -0.49
SENP3-203ENST00000580231 E2F4Q16254 413 aa11.98□□□□□ -0.49
SENP3-203ENST00000580231 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
SENP3-203ENST00000580231 ZFRQ96KR1 1074 aaKnown RBP11.98□□□□□ -0.49
SENP3-203ENST00000580231 CDK19Q9BWU1 502 aa11.98□□□□□ -0.49
SENP3-203ENST00000580231 MED14O60244 1454 aa11.97□□□□□ -0.49
SENP3-203ENST00000580231 SOWAHBA6NEL2 793 aa11.97□□□□□ -0.49
SENP3-203ENST00000580231 BCAMP50895 628 aa11.97□□□□□ -0.49
SENP3-203ENST00000580231 SAFB2Q14151 953 aaKnown RBP eCLIP11.97□□□□□ -0.49
SENP3-203ENST00000580231 CFAP53Q96M91 514 aa11.97□□□□□ -0.49
SENP3-203ENST00000580231 SEPT9Q9UHD8 586 aaPredicted RBP11.97□□□□□ -0.49
SENP3-203ENST00000580231 EID1Q9Y6B2 187 aa11.97□□□□□ -0.49
SENP3-203ENST00000580231 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
SENP3-203ENST00000580231 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
SENP3-203ENST00000580231 PLEKHG1Q9ULL1 1385 aa11.96□□□□□ -0.49
SENP3-203ENST00000580231 KNDC1Q76NI1 1749 aa11.96□□□□□ -0.49
SENP3-203ENST00000580231 MAP3K7O43318 606 aa11.95□□□□□ -0.5
SENP3-203ENST00000580231 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
SENP3-203ENST00000580231 THEMISQ8N1K5 641 aaPredicted RBP11.95□□□□□ -0.5
SENP3-203ENST00000580231 CERKQ8TCT0 537 aa11.95□□□□□ -0.5
SENP3-203ENST00000580231 BCANQ96GW7 911 aa11.95□□□□□ -0.5
SENP3-203ENST00000580231 ARIH1Q9Y4X5 557 aaPredicted RBP11.95□□□□□ -0.5
SENP3-203ENST00000580231 WASLO00401 505 aaPredicted RBP11.94□□□□□ -0.5
SENP3-203ENST00000580231 TXNDC2Q86VQ3 553 aa11.94□□□□□ -0.5
SENP3-203ENST00000580231 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
SENP3-203ENST00000580231 METP08581 1390 aa11.93□□□□□ -0.5
SENP3-203ENST00000580231 SLIT1O75093 1534 aa11.93□□□□□ -0.5
SENP3-203ENST00000580231 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
SENP3-203ENST00000580231 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
SENP3-203ENST00000580231 WDR70Q9NW82 654 aa11.93□□□□□ -0.5
SENP3-203ENST00000580231 RCAN3Q9UKA8 241 aa11.93□□□□□ -0.5
SENP3-203ENST00000580231 TBX22Q9Y458 520 aa11.93□□□□□ -0.5
SENP3-203ENST00000580231 ATP7BP35670 1465 aa11.93□□□□□ -0.5
SENP3-203ENST00000580231 ARHGAP23Q9P227 1491 aa11.93□□□□□ -0.5
SENP3-203ENST00000580231 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
SENP3-203ENST00000580231 ZNF521Q96K83 1311 aa11.92□□□□□ -0.5
SENP3-203ENST00000580231 CPS1P31327 1500 aa11.92□□□□□ -0.5
SENP3-203ENST00000580231 A0A0G2JS52 829 aa11.92□□□□□ -0.5
SENP3-203ENST00000580231 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
SENP3-203ENST00000580231 CD163L1Q9NR16 1453 aa11.91□□□□□ -0.5
SENP3-203ENST00000580231 FYB1O15117 783 aa11.91□□□□□ -0.5
SENP3-203ENST00000580231 RGS20O76081 388 aa11.91□□□□□ -0.5
SENP3-203ENST00000580231 MTHFSP49914 203 aa11.91□□□□□ -0.5
SENP3-203ENST00000580231 TSKSQ9UJT2 592 aa11.91□□□□□ -0.5
SENP3-203ENST00000580231 SALL2Q9Y467 1007 aaPredicted RBP11.91□□□□□ -0.5
SENP3-203ENST00000580231 ADAMTS13Q76LX8 1427 aa11.91□□□□□ -0.5
SENP3-203ENST00000580231 LTBP4Q8N2S1 1624 aa11.9□□□□□ -0.5
SENP3-203ENST00000580231 ITGBL1O95965 494 aaPredicted RBP11.9□□□□□ -0.5
SENP3-203ENST00000580231 LTKP29376 864 aa11.9□□□□□ -0.5
SENP3-203ENST00000580231 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
SENP3-203ENST00000580231 PLEKHH1Q9ULM0 1364 aa11.9□□□□□ -0.5
SENP3-203ENST00000580231 ANKRD26Q9UPS8 1709 aa11.89□□□□□ -0.51
SENP3-203ENST00000580231 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
SENP3-203ENST00000580231 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
SENP3-203ENST00000580231 NYAP1Q6ZVC0 841 aa11.89□□□□□ -0.51
SENP3-203ENST00000580231 TRMT2AQ8IZ69 625 aaKnown RBP11.89□□□□□ -0.51
SENP3-203ENST00000580231 WBP1LQ9NX94 342 aa11.89□□□□□ -0.51
SENP3-203ENST00000580231 CPSF1Q10570 1443 aaKnown RBP11.88□□□□□ -0.51
SENP3-203ENST00000580231 APAF1O14727 1248 aa11.88□□□□□ -0.51
SENP3-203ENST00000580231 RRP1P56182 461 aaKnown RBP11.88□□□□□ -0.51
SENP3-203ENST00000580231 SLFN5Q08AF3 891 aa11.88□□□□□ -0.51
SENP3-203ENST00000580231 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
SENP3-203ENST00000580231 NUDT16Q96DE0 195 aaKnown RBP11.88□□□□□ -0.51
SENP3-203ENST00000580231 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
SENP3-203ENST00000580231 PNNQ9H307 717 aaKnown RBP11.88□□□□□ -0.51
SENP3-203ENST00000580231 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
SENP3-203ENST00000580231 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
SENP3-203ENST00000580231 E9PSI1 815 aa11.87□□□□□ -0.51
SENP3-203ENST00000580231 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
SENP3-203ENST00000580231 EDC4Q6P2E9 1401 aaKnown RBP11.86□□□□□ -0.51
SENP3-203ENST00000580231 TNNT2P45379 298 aaPredicted RBP11.86□□□□□ -0.51
SENP3-203ENST00000580231 DUSP27Q5VZP5 1158 aa11.86□□□□□ -0.51
SENP3-203ENST00000580231 GGNBP2Q9H3C7 697 aa11.86□□□□□ -0.51
SENP3-203ENST00000580231 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.86□□□□□ -0.51
SENP3-203ENST00000580231 PIK3R4Q99570 1358 aa11.86□□□□□ -0.51
SENP3-203ENST00000580231 SHPRHQ149N8 1683 aa11.85□□□□□ -0.51
SENP3-203ENST00000580231 ADGRB2O60241 1585 aa11.85□□□□□ -0.51
SENP3-203ENST00000580231 SENP3-EIF4A1A0A087X0R7 540 aa11.85□□□□□ -0.51
SENP3-203ENST00000580231 WDR63Q8IWG1 891 aa11.85□□□□□ -0.51
SENP3-203ENST00000580231 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
SENP3-203ENST00000580231 LRCH3Q96II8 777 aa11.85□□□□□ -0.51
SENP3-203ENST00000580231 PPIP5K1Q6PFW1 1433 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms