RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ZNF526Q8TF50 670 aaPredicted RBP27.51■■□□□ 1.99
LIMD2-209ENST00000580222 CCNL1Q9UK58 526 aaPredicted RBP27.51■■□□□ 1.99
LIMD2-209ENST00000580222 KAT6BQ8WYB5 2073 aa27.5■■□□□ 1.99
LIMD2-209ENST00000580222 GPBP1L1Q9HC44 474 aaPredicted RBP27.5■■□□□ 1.99
LIMD2-209ENST00000580222 IP6K1Q92551 441 aa27.49■■□□□ 1.99
LIMD2-209ENST00000580222 ADCY9O60503 1353 aa27.48■■□□□ 1.99
LIMD2-209ENST00000580222 SLC12A5Q9H2X9 1139 aa27.48■■□□□ 1.99
LIMD2-209ENST00000580222 MON2Q7Z3U7 1717 aa27.47■■□□□ 1.99
LIMD2-209ENST00000580222 USP54Q70EL1 1684 aa27.46■■□□□ 1.99
LIMD2-209ENST00000580222 LTN1O94822 1766 aa27.45■■□□□ 1.99
LIMD2-209ENST00000580222 FBLN1P23142 703 aa27.45■■□□□ 1.98
LIMD2-209ENST00000580222 SIN3AQ96ST3 1273 aa27.45■■□□□ 1.98
LIMD2-209ENST00000580222 ROCK2O75116 1388 aaKnown RBP27.45■■□□□ 1.98
LIMD2-209ENST00000580222 CLSPNQ9HAW4 1339 aa27.44■■□□□ 1.98
LIMD2-209ENST00000580222 TMC1Q8TDI8 760 aa27.44■■□□□ 1.98
LIMD2-209ENST00000580222 CD2APQ9Y5K6 639 aa27.44■■□□□ 1.98
LIMD2-209ENST00000580222 ZCRB1Q8TBF4 217 aaKnown RBP27.43■■□□□ 1.98
LIMD2-209ENST00000580222 NEUROD1Q13562 356 aa27.42■■□□□ 1.98
LIMD2-209ENST00000580222 WWC3Q9ULE0 1092 aa27.42■■□□□ 1.98
LIMD2-209ENST00000580222 LY75O60449 1722 aa27.41■■□□□ 1.98
LIMD2-209ENST00000580222 AMIGO3Q86WK7 504 aa27.4■■□□□ 1.98
LIMD2-209ENST00000580222 DOT1LQ8TEK3 1739 aa27.39■■□□□ 1.98
LIMD2-209ENST00000580222 SMIM5Q71RC9 77 aa27.39■■□□□ 1.98
LIMD2-209ENST00000580222 MEGF6O75095 1541 aa27.39■■□□□ 1.98
LIMD2-209ENST00000580222 EDC4Q6P2E9 1401 aaKnown RBP27.38■■□□□ 1.97
LIMD2-209ENST00000580222 MAP3K19Q56UN5 1328 aa27.38■■□□□ 1.97
LIMD2-209ENST00000580222 KIF3CO14782 793 aa27.37■■□□□ 1.97
LIMD2-209ENST00000580222 HDGFL2Q7Z4V5 671 aaPredicted RBP27.37■■□□□ 1.97
LIMD2-209ENST00000580222 USP47Q96K76 1375 aa27.36■■□□□ 1.97
LIMD2-209ENST00000580222 HOXC9P31274 260 aa27.36■■□□□ 1.97
LIMD2-209ENST00000580222 A0A1W2PP64 1363 aa27.35■■□□□ 1.97
LIMD2-209ENST00000580222 FAM208AQ9UK61 1670 aaKnown RBP27.34■■□□□ 1.97
LIMD2-209ENST00000580222 NBPF6Q5VWK0 638 aa27.33■■□□□ 1.97
LIMD2-209ENST00000580222 NBPF4Q96M43 638 aa27.33■■□□□ 1.97
LIMD2-209ENST00000580222 USHBP1Q8N6Y0 703 aa27.32■■□□□ 1.96
LIMD2-209ENST00000580222 IGSF1Q8N6C5 1336 aa27.32■■□□□ 1.96
LIMD2-209ENST00000580222 TONSLQ96HA7 1378 aa27.32■■□□□ 1.96
LIMD2-209ENST00000580222 AMPHP49418 695 aa27.29■■□□□ 1.96
LIMD2-209ENST00000580222 DNAJC5GQ8N7S2 189 aa27.29■■□□□ 1.96
LIMD2-209ENST00000580222 TERF2IPQ9NYB0 399 aa27.29■■□□□ 1.96
LIMD2-209ENST00000580222 FLAD1Q8NFF5 587 aa27.27■■□□□ 1.96
LIMD2-209ENST00000580222 PALLDQ8WX93 1383 aa27.26■■□□□ 1.95
LIMD2-209ENST00000580222 RGPD2P0DJD1 1756 aa27.25■■□□□ 1.95
LIMD2-209ENST00000580222 MPRIPQ6WCQ1 1025 aa27.24■■□□□ 1.95
LIMD2-209ENST00000580222 PHF14O94880 888 aa27.23■■□□□ 1.95
LIMD2-209ENST00000580222 RRS1Q15050 365 aaKnown RBP27.23■■□□□ 1.95
LIMD2-209ENST00000580222 COG3Q96JB2 828 aa27.23■■□□□ 1.95
LIMD2-209ENST00000580222 C5P01031 1676 aa27.22■■□□□ 1.95
LIMD2-209ENST00000580222 CARD11Q9BXL7 1154 aa27.22■■□□□ 1.95
LIMD2-209ENST00000580222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.21■■□□□ 1.95
LIMD2-209ENST00000580222 CYP27B1O15528 508 aa27.2■■□□□ 1.94
LIMD2-209ENST00000580222 APLP1P51693 650 aa27.2■■□□□ 1.94
LIMD2-209ENST00000580222 AK7Q96M32 723 aa27.2■■□□□ 1.94
LIMD2-209ENST00000580222 RAPGEF4Q8WZA2 1011 aa27.19■■□□□ 1.94
LIMD2-209ENST00000580222 TOGARAM1Q9Y4F4 1720 aa27.19■■□□□ 1.94
LIMD2-209ENST00000580222 CGNL1Q0VF96 1302 aa27.17■■□□□ 1.94
LIMD2-209ENST00000580222 TATP17735 454 aaPredicted RBP27.16■■□□□ 1.94
LIMD2-209ENST00000580222 PIGBQ92521 554 aa27.16■■□□□ 1.94
LIMD2-209ENST00000580222 PUS7Q96PZ0 661 aaKnown RBP27.16■■□□□ 1.94
LIMD2-209ENST00000580222 C4BP0C0L5 1744 aa27.16■■□□□ 1.94
LIMD2-209ENST00000580222 LINC00116Q8NCU8 138 aa27.15■■□□□ 1.94
LIMD2-209ENST00000580222 TOMM70O94826 608 aa27.14■■□□□ 1.94
LIMD2-209ENST00000580222 HSP90AB2PQ58FF8 381 aa27.14■■□□□ 1.94
LIMD2-209ENST00000580222 NMRK2Q9NPI5 230 aa27.14■■□□□ 1.94
LIMD2-209ENST00000580222 PCDH11XQ9BZA7 1347 aa27.14■■□□□ 1.93
LIMD2-209ENST00000580222 PCDH11YQ9BZA8 1340 aa27.14■■□□□ 1.93
LIMD2-209ENST00000580222 TAF1LQ8IZX4 1826 aa27.13■■□□□ 1.93
LIMD2-209ENST00000580222 HTRA3P83110 453 aa27.13■■□□□ 1.93
LIMD2-209ENST00000580222 TIMELESSQ9UNS1 1208 aa27.13■■□□□ 1.93
LIMD2-209ENST00000580222 RTL1A6NKG5 1358 aa27.12■■□□□ 1.93
LIMD2-209ENST00000580222 COL13A1Q5TAT6 717 aaPredicted RBP27.11■■□□□ 1.93
LIMD2-209ENST00000580222 SMARCC1Q92922 1105 aaPredicted RBP27.11■■□□□ 1.93
LIMD2-209ENST00000580222 TESK2Q96S53 571 aa27.11■■□□□ 1.93
LIMD2-209ENST00000580222 GGNBP2Q9H3C7 697 aa27.11■■□□□ 1.93
LIMD2-209ENST00000580222 CICQ96RK0 1608 aaPredicted RBP27.1■■□□□ 1.93
LIMD2-209ENST00000580222 FYB1O15117 783 aa27.1■■□□□ 1.93
LIMD2-209ENST00000580222 SSFA2P28290 1259 aa27.1■■□□□ 1.93
LIMD2-209ENST00000580222 ITPK1Q13572 414 aa27.1■■□□□ 1.93
LIMD2-209ENST00000580222 PXDNLA1KZ92 1463 aa27.09■■□□□ 1.93
LIMD2-209ENST00000580222 LOC102724428A0A0B4J2F2 783 aa27.08■■□□□ 1.93
LIMD2-209ENST00000580222 A0A0G2JLW4 131 aa27.08■■□□□ 1.93
LIMD2-209ENST00000580222 MMP10P09238 476 aa27.08■■□□□ 1.93
LIMD2-209ENST00000580222 SIK1P57059 783 aa27.08■■□□□ 1.93
LIMD2-209ENST00000580222 UBR3Q6ZT12 1888 aa27.07■■□□□ 1.92
LIMD2-209ENST00000580222 HMGB2P26583 209 aaKnown RBP27.06■■□□□ 1.92
LIMD2-209ENST00000580222 BCS1LQ9Y276 419 aa27.06■■□□□ 1.92
LIMD2-209ENST00000580222 PCNTO95613 3336 aa27.05■■□□□ 1.92
LIMD2-209ENST00000580222 GNPATO15228 680 aa27.05■■□□□ 1.92
LIMD2-209ENST00000580222 ASAP1Q9ULH1 1129 aa27.05■■□□□ 1.92
LIMD2-209ENST00000580222 INSRP06213 1382 aa27.05■■□□□ 1.92
LIMD2-209ENST00000580222 NKX1-1Q15270 411 aaPredicted RBP27.04■■□□□ 1.92
LIMD2-209ENST00000580222 ARHGAP27Q6ZUM4 889 aa27.04■■□□□ 1.92
LIMD2-209ENST00000580222 SMG6Q86US8 1419 aaKnown RBP27.02■■□□□ 1.92
LIMD2-209ENST00000580222 ST20-MTHFSA0A0A6YYL1 179 aa27.02■■□□□ 1.92
LIMD2-209ENST00000580222 NSD3Q9BZ95 1437 aa27.01■■□□□ 1.91
LIMD2-209ENST00000580222 CAPN15O75808 1086 aa27.01■■□□□ 1.91
LIMD2-209ENST00000580222 MAP2P11137 1827 aaKnown RBP27■■□□□ 1.91
LIMD2-209ENST00000580222 KIAA1551Q9HCM1 1747 aa27■■□□□ 1.91
LIMD2-209ENST00000580222 DPEP1P16444 411 aa27■■□□□ 1.91
LIMD2-209ENST00000580222 TGFB2P61812 414 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms