RNA–Protein interactions for RNA: ENST00000580103.6

NSRP1-208, Transcript of nuclear speckle splicing regulatory protein 1, human

TSL 5

Gene NSRP1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSRP1-208	ENST00000580103	HOXC9	P31274	260 aa		14.04	□□□□□ -0.16
NSRP1-208	ENST00000580103	LRRC4B	Q9NT99	713 aa		14.04	□□□□□ -0.16
NSRP1-208	ENST00000580103	FYB1	O15117	783 aa		14.03	□□□□□ -0.16
NSRP1-208	ENST00000580103	ZBTB7A	O95365	584 aa		14.03	□□□□□ -0.16
NSRP1-208	ENST00000580103	STK32B	Q9NY57	414 aa		14.03	□□□□□ -0.16
NSRP1-208	ENST00000580103	SLC24A1	O60721	1099 aa		14.02	□□□□□ -0.17
NSRP1-208	ENST00000580103	COG3	Q96JB2	828 aa		14.02	□□□□□ -0.17
NSRP1-208	ENST00000580103	PPP1R1B	Q9UD71	204 aa	Predicted RBP	14.02	□□□□□ -0.17
NSRP1-208	ENST00000580103	MEGF6	O75095	1541 aa		14.01	□□□□□ -0.17
NSRP1-208	ENST00000580103	NSD2	O96028	1365 aa		14.01	□□□□□ -0.17
NSRP1-208	ENST00000580103	USP47	Q96K76	1375 aa		14.01	□□□□□ -0.17
NSRP1-208	ENST00000580103	TRIM26	Q12899	539 aa	Predicted RBP	14.01	□□□□□ -0.17
NSRP1-208	ENST00000580103	ZNF827	Q17R98	1081 aa		14.01	□□□□□ -0.17
NSRP1-208	ENST00000580103	LTV1	Q96GA3	475 aa	Predicted RBP	14.01	□□□□□ -0.17
NSRP1-208	ENST00000580103	ATF5	Q9Y2D1	282 aa	Predicted RBP	14.01	□□□□□ -0.17
NSRP1-208	ENST00000580103	RTL1	A6NKG5	1358 aa		13.99	□□□□□ -0.17
NSRP1-208	ENST00000580103	NBPF6	Q5VWK0	638 aa		13.99	□□□□□ -0.17
NSRP1-208	ENST00000580103	AKT1S1	Q96B36	256 aa		13.99	□□□□□ -0.17
NSRP1-208	ENST00000580103	NBPF4	Q96M43	638 aa		13.99	□□□□□ -0.17
NSRP1-208	ENST00000580103	MTFR1L	Q9H019	292 aa		13.99	□□□□□ -0.17
NSRP1-208	ENST00000580103	CHD4	Q14839	1912 aa		13.99	□□□□□ -0.17
NSRP1-208	ENST00000580103	RRS1	Q15050	365 aa	Known RBP	13.98	□□□□□ -0.17
NSRP1-208	ENST00000580103	DDX54	Q8TDD1	881 aa	Known RBP	13.98	□□□□□ -0.17
NSRP1-208	ENST00000580103	GGNBP2	Q9H3C7	697 aa		13.98	□□□□□ -0.17
NSRP1-208	ENST00000580103	MAP2	P11137	1827 aa	Known RBP	13.98	□□□□□ -0.17
NSRP1-208	ENST00000580103	ANKRD26	Q9UPS8	1709 aa		13.98	□□□□□ -0.17
NSRP1-208	ENST00000580103	AMPH	P49418	695 aa		13.97	□□□□□ -0.17
NSRP1-208	ENST00000580103	TMF1	P82094	1093 aa		13.97	□□□□□ -0.17
NSRP1-208	ENST00000580103	CARD14	Q9BXL6	1004 aa		13.97	□□□□□ -0.17
NSRP1-208	ENST00000580103	ITGB4	P16144	1822 aa		13.97	□□□□□ -0.17
NSRP1-208	ENST00000580103	TAF1L	Q8IZX4	1826 aa		13.97	□□□□□ -0.17
NSRP1-208	ENST00000580103	YY1	P25490	414 aa		13.96	□□□□□ -0.17
NSRP1-208	ENST00000580103	PRIM1	P49642	420 aa	Known RBP	13.96	□□□□□ -0.17
NSRP1-208	ENST00000580103	ZCRB1	Q8TBF4	217 aa	Known RBP	13.96	□□□□□ -0.17
NSRP1-208	ENST00000580103	SYT17	Q9BSW7	474 aa		13.96	□□□□□ -0.17
NSRP1-208	ENST00000580103	SLC27A3	Q5K4L6	730 aa		13.95	□□□□□ -0.18
NSRP1-208	ENST00000580103	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.95	□□□□□ -0.18
NSRP1-208	ENST00000580103	PKD1L3	Q7Z443	1732 aa		13.95	□□□□□ -0.18
NSRP1-208	ENST00000580103	TOGARAM1	Q9Y4F4	1720 aa		13.95	□□□□□ -0.18
NSRP1-208	ENST00000580103	INSR	P06213	1382 aa		13.95	□□□□□ -0.18
NSRP1-208	ENST00000580103	MAP3K5	Q99683	1374 aa		13.95	□□□□□ -0.18
NSRP1-208	ENST00000580103	NCAPD2	Q15021	1401 aa		13.94	□□□□□ -0.18
NSRP1-208	ENST00000580103	HSP90AB2P	Q58FF8	381 aa		13.94	□□□□□ -0.18
NSRP1-208	ENST00000580103	USHBP1	Q8N6Y0	703 aa		13.94	□□□□□ -0.18
NSRP1-208	ENST00000580103	KIF24	Q5T7B8	1368 aa		13.94	□□□□□ -0.18
NSRP1-208	ENST00000580103	PNPLA7	Q6ZV29	1317 aa		13.93	□□□□□ -0.18
NSRP1-208	ENST00000580103	KCNQ4	P56696	695 aa		13.93	□□□□□ -0.18
NSRP1-208	ENST00000580103	CGNL1	Q0VF96	1302 aa		13.92	□□□□□ -0.18
NSRP1-208	ENST00000580103	ARX	Q96QS3	562 aa		13.92	□□□□□ -0.18
NSRP1-208	ENST00000580103	FLT4	P35916	1363 aa		13.92	□□□□□ -0.18
NSRP1-208	ENST00000580103	C5	P01031	1676 aa		13.91	□□□□□ -0.18
NSRP1-208	ENST00000580103	SLC16A10	Q8TF71	515 aa		13.91	□□□□□ -0.18
NSRP1-208	ENST00000580103	TIMELESS	Q9UNS1	1208 aa		13.91	□□□□□ -0.18
NSRP1-208	ENST00000580103	NSD3	Q9BZ95	1437 aa		13.9	□□□□□ -0.18
NSRP1-208	ENST00000580103	CDCA8	Q53HL2	280 aa		13.9	□□□□□ -0.18
NSRP1-208	ENST00000580103	CYP27B1	O15528	508 aa		13.89	□□□□□ -0.19
NSRP1-208	ENST00000580103	SYTL4	Q96C24	671 aa	Predicted RBP	13.89	□□□□□ -0.19
NSRP1-208	ENST00000580103	EMILIN1	Q9Y6C2	1016 aa		13.89	□□□□□ -0.19
NSRP1-208	ENST00000580103	UBR3	Q6ZT12	1888 aa		13.88	□□□□□ -0.19
NSRP1-208	ENST00000580103	SMG6	Q86US8	1419 aa	Known RBP	13.88	□□□□□ -0.19
NSRP1-208	ENST00000580103	TAT	P17735	454 aa	Predicted RBP	13.87	□□□□□ -0.19
NSRP1-208	ENST00000580103	RAPGEF4	Q8WZA2	1011 aa		13.87	□□□□□ -0.19
NSRP1-208	ENST00000580103	WASHC2A	Q641Q2	1341 aa		13.87	□□□□□ -0.19
NSRP1-208	ENST00000580103	CLSPN	Q9HAW4	1339 aa		13.87	□□□□□ -0.19
NSRP1-208	ENST00000580103	COL23A1	Q86Y22	540 aa	Predicted RBP	13.86	□□□□□ -0.19
NSRP1-208	ENST00000580103	TFCP2L1	Q9NZI6	479 aa		13.86	□□□□□ -0.19
NSRP1-208	ENST00000580103	CCNL1	Q9UK58	526 aa	Predicted RBP	13.86	□□□□□ -0.19
NSRP1-208	ENST00000580103	PCDH11X	Q9BZA7	1347 aa		13.86	□□□□□ -0.19
NSRP1-208	ENST00000580103	PCDH11Y	Q9BZA8	1340 aa		13.86	□□□□□ -0.19
NSRP1-208	ENST00000580103	NKX1-1	Q15270	411 aa	Predicted RBP	13.85	□□□□□ -0.19
NSRP1-208	ENST00000580103	C4B	P0C0L5	1744 aa		13.84	□□□□□ -0.19
NSRP1-208	ENST00000580103	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.84	□□□□□ -0.19
NSRP1-208	ENST00000580103	EYA1	Q99502	592 aa		13.84	□□□□□ -0.19
NSRP1-208	ENST00000580103	POLK	Q9UBT6	870 aa		13.84	□□□□□ -0.19
NSRP1-208	ENST00000580103	PALLD	Q8WX93	1383 aa		13.83	□□□□□ -0.2
NSRP1-208	ENST00000580103	AMIGO3	Q86WK7	504 aa		13.82	□□□□□ -0.2
NSRP1-208	ENST00000580103	NLGN2	Q8NFZ4	835 aa		13.82	□□□□□ -0.2
NSRP1-208	ENST00000580103	PIGB	Q92521	554 aa		13.82	□□□□□ -0.2
NSRP1-208	ENST00000580103	POLD1	P28340	1107 aa		13.81	□□□□□ -0.2
NSRP1-208	ENST00000580103	MPRIP	Q6WCQ1	1025 aa		13.81	□□□□□ -0.2
NSRP1-208	ENST00000580103	CEP350	Q5VT06	3117 aa		13.8	□□□□□ -0.2
NSRP1-208	ENST00000580103	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	5e-6	■■■■□ 20.1
NSRP1-208	ENST00000580103	EIF4A2	Q14240	407 aa	Known RBP	13.79	□□□□□ -0.2
NSRP1-208	ENST00000580103	ZNF831	Q5JPB2	1677 aa		13.79	□□□□□ -0.2
NSRP1-208	ENST00000580103	PPM1G	O15355	546 aa	Predicted RBP	13.78	□□□□□ -0.2
NSRP1-208	ENST00000580103	HSPA5	P11021	654 aa	Known RBP	13.78	□□□□□ -0.2
NSRP1-208	ENST00000580103	PCGF6	Q9BYE7	350 aa		13.78	□□□□□ -0.2
NSRP1-208	ENST00000580103	PHKG2	P15735	406 aa		13.77	□□□□□ -0.21
NSRP1-208	ENST00000580103	YBX3	P16989	372 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
NSRP1-208	ENST00000580103	SMIM5	Q71RC9	77 aa		13.77	□□□□□ -0.21
NSRP1-208	ENST00000580103	SMARCC1	Q92922	1105 aa	Predicted RBP	13.77	□□□□□ -0.21
NSRP1-208	ENST00000580103	PLEKHG2	Q9H7P9	1386 aa		13.77	□□□□□ -0.21
NSRP1-208	ENST00000580103	SPG7	Q9UQ90	795 aa		13.77	□□□□□ -0.21
NSRP1-208	ENST00000580103	MYH14	Q7Z406	1995 aa	Known RBP	13.76	□□□□□ -0.21
NSRP1-208	ENST00000580103	COL5A3	P25940	1745 aa	Predicted RBP	13.76	□□□□□ -0.21
NSRP1-208	ENST00000580103	IGSF1	Q8N6C5	1336 aa		13.76	□□□□□ -0.21
NSRP1-208	ENST00000580103	ABCB7	O75027	752 aa		13.76	□□□□□ -0.21
NSRP1-208	ENST00000580103	GPR162	Q16538	588 aa		13.76	□□□□□ -0.21
NSRP1-208	ENST00000580103	MSL1	Q68DK7	614 aa		13.76	□□□□□ -0.21
NSRP1-208	ENST00000580103	LINC00116	Q8NCU8	138 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms