RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
RNF43-204ENST00000580014 ATF3P18847 181 aa9.88□□□□□ -0.83
RNF43-204ENST00000580014 TSR1Q2NL82 804 aaKnown RBP9.88□□□□□ -0.83
RNF43-204ENST00000580014 DDRGK1Q96HY6 314 aa9.88□□□□□ -0.83
RNF43-204ENST00000580014 FAM117AQ9C073 453 aa9.88□□□□□ -0.83
RNF43-204ENST00000580014 POLR3AO14802 1390 aaPredicted RBP9.88□□□□□ -0.83
RNF43-204ENST00000580014 USP32Q8NFA0 1604 aa9.87□□□□□ -0.83
RNF43-204ENST00000580014 CERKQ8TCT0 537 aa9.87□□□□□ -0.83
RNF43-204ENST00000580014 SLC12A5Q9H2X9 1139 aa9.87□□□□□ -0.83
RNF43-204ENST00000580014 CABP1Q9NZU7 370 aa9.87□□□□□ -0.83
RNF43-204ENST00000580014 CPSF1Q10570 1443 aaKnown RBP9.87□□□□□ -0.83
RNF43-204ENST00000580014 CD163L1Q9NR16 1453 aa9.86□□□□□ -0.83
RNF43-204ENST00000580014 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
RNF43-204ENST00000580014 ZSWIM6Q9HCJ5 1215 aa9.86□□□□□ -0.83
RNF43-204ENST00000580014 SLAIN2Q9P270 581 aa9.86□□□□□ -0.83
RNF43-204ENST00000580014 PPIP5K1Q6PFW1 1433 aa9.85□□□□□ -0.83
RNF43-204ENST00000580014 RIMBP2O15034 1052 aa9.85□□□□□ -0.83
RNF43-204ENST00000580014 HOXB3P14651 431 aaPredicted RBP9.85□□□□□ -0.83
RNF43-204ENST00000580014 TTLL12Q14166 644 aaPredicted RBP9.85□□□□□ -0.83
RNF43-204ENST00000580014 TOPAZ1Q8N9V7 1692 aa9.85□□□□□ -0.83
RNF43-204ENST00000580014 BRD4O60885 1362 aaPredicted RBP9.85□□□□□ -0.83
RNF43-204ENST00000580014 ANKRD36BQ8N2N9 1353 aa9.85□□□□□ -0.83
RNF43-204ENST00000580014 SSH2Q76I76 1423 aa9.84□□□□□ -0.83
RNF43-204ENST00000580014 NUDT7P0C024 238 aa9.84□□□□□ -0.83
RNF43-204ENST00000580014 ZDHHC16Q969W1 377 aa9.84□□□□□ -0.83
RNF43-204ENST00000580014 ORAI2Q96SN7 254 aa9.84□□□□□ -0.83
RNF43-204ENST00000580014 CARD14Q9BXL6 1004 aa9.84□□□□□ -0.83
RNF43-204ENST00000580014 TERF2IPQ9NYB0 399 aa9.84□□□□□ -0.83
RNF43-204ENST00000580014 MYOM1P52179 1685 aa9.83□□□□□ -0.84
RNF43-204ENST00000580014 ACEP12821 1306 aa9.83□□□□□ -0.84
RNF43-204ENST00000580014 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
RNF43-204ENST00000580014 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
RNF43-204ENST00000580014 C6orf132Q5T0Z8 1188 aa9.83□□□□□ -0.84
RNF43-204ENST00000580014 BRINP3Q76B58 766 aa9.83□□□□□ -0.84
RNF43-204ENST00000580014 ZNF454Q8N9F8 522 aa9.83□□□□□ -0.84
RNF43-204ENST00000580014 PANK3Q9H999 370 aa9.83□□□□□ -0.84
RNF43-204ENST00000580014 DDX10Q13206 875 aaKnown RBP9.82□□□□□ -0.84
RNF43-204ENST00000580014 ESCO1Q5FWF5 840 aa9.82□□□□□ -0.84
RNF43-204ENST00000580014 GIGYF2Q6Y7W6 1299 aaKnown RBP9.82□□□□□ -0.84
RNF43-204ENST00000580014 MAMSTRQ6ZN01 415 aa9.82□□□□□ -0.84
RNF43-204ENST00000580014 TMC1Q8TDI8 760 aa9.82□□□□□ -0.84
RNF43-204ENST00000580014 KHSRPQ92945 711 aaKnown RBP eCLIP9.82□□□□□ -0.84
RNF43-204ENST00000580014 SCUBE2Q9NQ36 999 aa9.82□□□□□ -0.84
RNF43-204ENST00000580014 A0A1W2PP64 1363 aa9.82□□□□□ -0.84
RNF43-204ENST00000580014 NPC1L1Q9UHC9 1359 aa9.82□□□□□ -0.84
RNF43-204ENST00000580014 TOM1O60784 492 aa9.81□□□□□ -0.84
RNF43-204ENST00000580014 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
RNF43-204ENST00000580014 HDGFL2Q7Z4V5 671 aaPredicted RBP9.81□□□□□ -0.84
RNF43-204ENST00000580014 USP6P35125 1406 aa9.81□□□□□ -0.84
RNF43-204ENST00000580014 CLCN1P35523 988 aa9.8□□□□□ -0.84
RNF43-204ENST00000580014 PMFBP1Q8TBY8 1022 aa9.8□□□□□ -0.84
RNF43-204ENST00000580014 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
RNF43-204ENST00000580014 RBM27Q9P2N5 1060 aaKnown RBP9.8□□□□□ -0.84
RNF43-204ENST00000580014 EDC4Q6P2E9 1401 aaKnown RBP9.8□□□□□ -0.84
RNF43-204ENST00000580014 KIF1AQ12756 1690 aa9.8□□□□□ -0.84
RNF43-204ENST00000580014 SOS2Q07890 1332 aaPredicted RBP9.8□□□□□ -0.84
RNF43-204ENST00000580014 ITSN1Q15811 1721 aa9.79□□□□□ -0.84
RNF43-204ENST00000580014 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
RNF43-204ENST00000580014 MS4A1P11836 297 aa9.79□□□□□ -0.84
RNF43-204ENST00000580014 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
RNF43-204ENST00000580014 POLR3GLQ9BT43 218 aa9.79□□□□□ -0.84
RNF43-204ENST00000580014 REPIN1Q9BWE0 567 aaKnown RBP9.79□□□□□ -0.84
RNF43-204ENST00000580014 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
RNF43-204ENST00000580014 NPHP3Q7Z494 1330 aa9.79□□□□□ -0.84
RNF43-204ENST00000580014 TTC21BQ7Z4L5 1316 aa9.79□□□□□ -0.84
RNF43-204ENST00000580014 TTC21AQ8NDW8 1320 aa9.79□□□□□ -0.84
RNF43-204ENST00000580014 PXDNQ92626 1479 aa9.79□□□□□ -0.84
RNF43-204ENST00000580014 SBNO1A3KN83 1393 aa9.78□□□□□ -0.84
RNF43-204ENST00000580014 FOXO3O43524 673 aa9.78□□□□□ -0.84
RNF43-204ENST00000580014 OATP04181 439 aa9.78□□□□□ -0.84
RNF43-204ENST00000580014 PADI6Q6TGC4 694 aa9.78□□□□□ -0.84
RNF43-204ENST00000580014 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
RNF43-204ENST00000580014 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
RNF43-204ENST00000580014 GPCPD1Q9NPB8 672 aa9.78□□□□□ -0.84
RNF43-204ENST00000580014 USP31Q70CQ4 1352 aa9.77□□□□□ -0.84
RNF43-204ENST00000580014 NSD3Q9BZ95 1437 aa9.77□□□□□ -0.85
RNF43-204ENST00000580014 UBAP1LF5GYI3 381 aa9.77□□□□□ -0.85
RNF43-204ENST00000580014 FYB1O15117 783 aa9.77□□□□□ -0.85
RNF43-204ENST00000580014 KRT28Q7Z3Y7 464 aa9.77□□□□□ -0.85
RNF43-204ENST00000580014 PHOX2BQ99453 314 aa9.77□□□□□ -0.85
RNF43-204ENST00000580014 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
RNF43-204ENST00000580014 KNSTRNQ9Y448 316 aa9.77□□□□□ -0.85
RNF43-204ENST00000580014 NSD2O96028 1365 aa9.76□□□□□ -0.85
RNF43-204ENST00000580014 RGPD8O14715 1765 aaPredicted RBP9.76□□□□□ -0.85
RNF43-204ENST00000580014 AKAP12Q02952 1782 aa9.76□□□□□ -0.85
RNF43-204ENST00000580014 AHDC1Q5TGY3 1603 aaPredicted RBP9.76□□□□□ -0.85
RNF43-204ENST00000580014 MDM2Q00987 491 aaPredicted RBP9.76□□□□□ -0.85
RNF43-204ENST00000580014 PSME1Q06323 249 aa9.76□□□□□ -0.85
RNF43-204ENST00000580014 METTL3Q86U44 580 aaKnown RBP9.76□□□□□ -0.85
RNF43-204ENST00000580014 ADGRG1Q9Y653 693 aa9.76□□□□□ -0.85
RNF43-204ENST00000580014 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
RNF43-204ENST00000580014 MON2Q7Z3U7 1717 aa9.76□□□□□ -0.85
RNF43-204ENST00000580014 NRKQ7Z2Y5 1582 aa9.75□□□□□ -0.85
RNF43-204ENST00000580014 PSDA5PKW4 1024 aaPredicted RBP9.75□□□□□ -0.85
RNF43-204ENST00000580014 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
RNF43-204ENST00000580014 SPATA31A3Q5VYP0 1347 aa9.75□□□□□ -0.85
RNF43-204ENST00000580014 NHSL1Q5SYE7 1610 aa9.74□□□□□ -0.85
RNF43-204ENST00000580014 PRSS12P56730 875 aa9.74□□□□□ -0.85
RNF43-204ENST00000580014 FAM161AQ3B820 660 aa9.74□□□□□ -0.85
RNF43-204ENST00000580014 PXYLP1Q8TE99 480 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms