RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 RGPD1P0DJD0 1748 aa30.46■■■□□ 2.47
NDEL1-207ENST00000580012 PARP4Q9UKK3 1724 aaKnown RBP30.45■■■□□ 2.47
NDEL1-207ENST00000580012 TNS2Q63HR2 1409 aa30.45■■■□□ 2.46
NDEL1-207ENST00000580012 HMOX1P09601 288 aa30.43■■■□□ 2.46
NDEL1-207ENST00000580012 U2AF1L5P0DN76 240 aaPredicted RBP30.41■■■□□ 2.46
NDEL1-207ENST00000580012 U2AF1Q01081 240 aaKnown RBP eCLIP30.41■■■□□ 2.46
NDEL1-207ENST00000580012 FCHSD2O94868 740 aa30.4■■■□□ 2.46
NDEL1-207ENST00000580012 FAM182BQ5T319 152 aa30.4■■■□□ 2.46
NDEL1-207ENST00000580012 LRRC37A3O60309 1634 aa30.4■■■□□ 2.46
NDEL1-207ENST00000580012 BCL9O00512 1426 aa30.39■■■□□ 2.46
NDEL1-207ENST00000580012 WNK3Q9BYP7 1800 aa30.39■■■□□ 2.46
NDEL1-207ENST00000580012 CCDC184Q52MB2 194 aa30.39■■■□□ 2.46
NDEL1-207ENST00000580012 FAM196AQ6ZSG2 479 aa30.39■■■□□ 2.46
NDEL1-207ENST00000580012 RSPH6AQ9H0K4 717 aa30.39■■■□□ 2.46
NDEL1-207ENST00000580012 SPG7Q9UQ90 795 aa30.39■■■□□ 2.46
NDEL1-207ENST00000580012 AMOTQ4VCS5 1084 aa30.38■■■□□ 2.45
NDEL1-207ENST00000580012 PLEKHO1Q53GL0 409 aaPredicted RBP30.38■■■□□ 2.45
NDEL1-207ENST00000580012 DDX54Q8TDD1 881 aaKnown RBP30.38■■■□□ 2.45
NDEL1-207ENST00000580012 BRWD3Q6RI45 1802 aa30.38■■■□□ 2.45
NDEL1-207ENST00000580012 CYP27B1O15528 508 aa30.37■■■□□ 2.45
NDEL1-207ENST00000580012 DIEXFQ68CQ4 756 aaKnown RBP30.37■■■□□ 2.45
NDEL1-207ENST00000580012 PCDH11XQ9BZA7 1347 aa30.34■■■□□ 2.45
NDEL1-207ENST00000580012 PCDH11YQ9BZA8 1340 aa30.34■■■□□ 2.45
NDEL1-207ENST00000580012 NKX1-1Q15270 411 aaPredicted RBP30.33■■■□□ 2.45
NDEL1-207ENST00000580012 PRKAR2BP31323 418 aa30.32■■■□□ 2.44
NDEL1-207ENST00000580012 PHKG2P15735 406 aa30.3■■■□□ 2.44
NDEL1-207ENST00000580012 IFNL2Q8IZJ0 200 aa30.3■■■□□ 2.44
NDEL1-207ENST00000580012 PHACTR3Q96KR7 559 aa30.3■■■□□ 2.44
NDEL1-207ENST00000580012 PLEKHF1Q96S99 279 aa30.3■■■□□ 2.44
NDEL1-207ENST00000580012 MTHFSDQ2M296 383 aaKnown RBP30.28■■■□□ 2.44
NDEL1-207ENST00000580012 PNISRQ8TF01 805 aaKnown RBP30.27■■■□□ 2.44
NDEL1-207ENST00000580012 ADAMTS8Q9UP79 889 aa30.27■■■□□ 2.44
NDEL1-207ENST00000580012 ZNF530Q6P9A1 599 aaPredicted RBP30.26■■■□□ 2.43
NDEL1-207ENST00000580012 PKD1L3Q7Z443 1732 aa30.26■■■□□ 2.43
NDEL1-207ENST00000580012 CCDC125Q86Z20 511 aa30.26■■■□□ 2.43
NDEL1-207ENST00000580012 MRS2Q9HD23 443 aa30.26■■■□□ 2.43
NDEL1-207ENST00000580012 WDR43Q15061 677 aaKnown RBP eCLIP30.25■■■□□ 2.43
NDEL1-207ENST00000580012 PNNQ9H307 717 aaKnown RBP30.25■■■□□ 2.43
NDEL1-207ENST00000580012 EP400Q96L91 3159 aa30.24■■■□□ 2.43
NDEL1-207ENST00000580012 AKAP4Q5JQC9 854 aa30.23■■■□□ 2.43
NDEL1-207ENST00000580012 SHANK3Q9BYB0 1731 aa30.22■■■□□ 2.43
NDEL1-207ENST00000580012 TRIM37O94972 964 aa30.22■■■□□ 2.43
NDEL1-207ENST00000580012 GAS2L2Q8NHY3 880 aa30.22■■■□□ 2.43
NDEL1-207ENST00000580012 BCL11BQ9C0K0 894 aaPredicted RBP30.22■■■□□ 2.43
NDEL1-207ENST00000580012 HSP90AB1P08238 724 aaKnown RBP30.21■■■□□ 2.43
NDEL1-207ENST00000580012 CCER2I3L3R5 266 aa30.2■■■□□ 2.43
NDEL1-207ENST00000580012 KCNQ2O43526 872 aa30.2■■■□□ 2.43
NDEL1-207ENST00000580012 C1orf141Q5JVX7 400 aa30.2■■■□□ 2.43
NDEL1-207ENST00000580012 PTF1AQ7RTS3 328 aa30.2■■■□□ 2.43
NDEL1-207ENST00000580012 DCAF5Q96JK2 942 aa30.19■■■□□ 2.42
NDEL1-207ENST00000580012 PRIM1P49642 420 aaKnown RBP30.18■■■□□ 2.42
NDEL1-207ENST00000580012 ACSBG1Q96GR2 724 aa30.18■■■□□ 2.42
NDEL1-207ENST00000580012 MIER1Q8N108 512 aa30.16■■■□□ 2.42
NDEL1-207ENST00000580012 RUNDC1Q96C34 613 aa30.15■■■□□ 2.42
NDEL1-207ENST00000580012 ERVV-2B6SEH9 535 aa30.14■■■□□ 2.42
NDEL1-207ENST00000580012 MPRIPQ6WCQ1 1025 aa30.14■■■□□ 2.42
NDEL1-207ENST00000580012 NEFMP07197 916 aa30.13■■■□□ 2.41
NDEL1-207ENST00000580012 KDM6AO15550 1401 aaPredicted RBP30.13■■■□□ 2.41
NDEL1-207ENST00000580012 GNAT3A8MTJ3 354 aa30.12■■■□□ 2.41
NDEL1-207ENST00000580012 LGR6Q9HBX8 967 aa30.12■■■□□ 2.41
NDEL1-207ENST00000580012 RNMTO43148 476 aaKnown RBP30.11■■■□□ 2.41
NDEL1-207ENST00000580012 NFE2L2Q16236 605 aa30.11■■■□□ 2.41
NDEL1-207ENST00000580012 CCDC146Q8IYE0 955 aa30.11■■■□□ 2.41
NDEL1-207ENST00000580012 HTATSF1O43719 755 aaKnown RBP30.1■■■□□ 2.41
NDEL1-207ENST00000580012 APBA3O96018 575 aa30.1■■■□□ 2.41
NDEL1-207ENST00000580012 SF3B2Q13435 895 aaKnown RBP30.1■■■□□ 2.41
NDEL1-207ENST00000580012 IL17REQ8NFR9 667 aa30.1■■■□□ 2.41
NDEL1-207ENST00000580012 MAPK8IP3Q9UPT6 1336 aa30.1■■■□□ 2.41
NDEL1-207ENST00000580012 MAP3K5Q99683 1374 aa30.1■■■□□ 2.41
NDEL1-207ENST00000580012 PLSCR1O15162 318 aa30.08■■■□□ 2.41
NDEL1-207ENST00000580012 PIGBQ92521 554 aa30.08■■■□□ 2.41
NDEL1-207ENST00000580012 TMPOP42166 694 aaKnown RBP30.07■■■□□ 2.4
NDEL1-207ENST00000580012 SYTL4Q96C24 671 aaPredicted RBP30.07■■■□□ 2.4
NDEL1-207ENST00000580012 BAG6P46379 1132 aa30.05■■■□□ 2.4
NDEL1-207ENST00000580012 DEFB132Q7Z7B7 95 aa30.05■■■□□ 2.4
NDEL1-207ENST00000580012 CAMKK2Q96RR4 588 aa30.05■■■□□ 2.4
NDEL1-207ENST00000580012 CEMIPQ8WUJ3 1361 aa30.04■■■□□ 2.4
NDEL1-207ENST00000580012 SBF2Q86WG5 1849 aa30.04■■■□□ 2.4
NDEL1-207ENST00000580012 CABP4P57796 275 aa30.04■■■□□ 2.4
NDEL1-207ENST00000580012 TMOD3Q9NYL9 352 aa30.04■■■□□ 2.4
NDEL1-207ENST00000580012 NFATC2IPQ8NCF5 419 aa30.03■■■□□ 2.4
NDEL1-207ENST00000580012 SLC52A2Q9HAB3 445 aa30.03■■■□□ 2.4
NDEL1-207ENST00000580012 NHSQ6T4R5 1651 aa30.03■■■□□ 2.4
NDEL1-207ENST00000580012 RIPK4P57078 832 aa30.02■■■□□ 2.4
NDEL1-207ENST00000580012 SRCAPQ6ZRS2 3230 aa30.02■■■□□ 2.4
NDEL1-207ENST00000580012 EN1Q05925 392 aaPredicted RBP30.01■■■□□ 2.39
NDEL1-207ENST00000580012 APAF1O14727 1248 aa30■■■□□ 2.39
NDEL1-207ENST00000580012 FAM9BQ8IZU0 186 aa30■■■□□ 2.39
NDEL1-207ENST00000580012 PROM2Q8N271 834 aa30■■■□□ 2.39
NDEL1-207ENST00000580012 RTF1Q92541 710 aaKnown RBP30■■■□□ 2.39
NDEL1-207ENST00000580012 TOGARAM1Q9Y4F4 1720 aa29.99■■■□□ 2.39
NDEL1-207ENST00000580012 ADAMTS7Q9UKP4 1686 aa29.99■■■□□ 2.39
NDEL1-207ENST00000580012 MCM10Q7L590 875 aa29.99■■■□□ 2.39
NDEL1-207ENST00000580012 ATG3Q9NT62 314 aa29.98■■■□□ 2.39
NDEL1-207ENST00000580012 TNS1Q9HBL0 1735 aaKnown RBP29.98■■■□□ 2.39
NDEL1-207ENST00000580012 DOT1LQ8TEK3 1739 aa29.97■■■□□ 2.39
NDEL1-207ENST00000580012 DCTN1Q14203 1278 aa29.97■■■□□ 2.39
NDEL1-207ENST00000580012 EZH2Q15910 746 aaKnown RBP29.97■■■□□ 2.39
NDEL1-207ENST00000580012 RRP7AQ9Y3A4 280 aaKnown RBP29.97■■■□□ 2.39
NDEL1-207ENST00000580012 MRC1P22897 1456 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms