RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 CFAP53Q96M91 514 aa22.91■■□□□ 1.26
CBX3P2-201ENST00000579647 RALBP1Q15311 655 aa22.9■■□□□ 1.26
CBX3P2-201ENST00000579647 DEFB132Q7Z7B7 95 aa22.89■■□□□ 1.25
CBX3P2-201ENST00000579647 ACSBG1Q96GR2 724 aa22.88■■□□□ 1.25
CBX3P2-201ENST00000579647 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
CBX3P2-201ENST00000579647 HMOX1P09601 288 aa22.87■■□□□ 1.25
CBX3P2-201ENST00000579647 COL3A1P02461 1466 aaPredicted RBP22.86■■□□□ 1.25
CBX3P2-201ENST00000579647 PTF1AQ7RTS3 328 aa22.86■■□□□ 1.25
CBX3P2-201ENST00000579647 SPG7Q9UQ90 795 aa22.86■■□□□ 1.25
CBX3P2-201ENST00000579647 EP400Q96L91 3159 aa22.86■■□□□ 1.25
CBX3P2-201ENST00000579647 APBA3O96018 575 aa22.85■■□□□ 1.25
CBX3P2-201ENST00000579647 KCNQ2O43526 872 aa22.84■■□□□ 1.25
CBX3P2-201ENST00000579647 RGPD1P0DJD0 1748 aa22.84■■□□□ 1.25
CBX3P2-201ENST00000579647 BCL9O00512 1426 aa22.84■■□□□ 1.25
CBX3P2-201ENST00000579647 SHANK3Q9BYB0 1731 aa22.84■■□□□ 1.25
CBX3P2-201ENST00000579647 CYP27B1O15528 508 aa22.83■■□□□ 1.25
CBX3P2-201ENST00000579647 BAG6P46379 1132 aa22.83■■□□□ 1.25
CBX3P2-201ENST00000579647 PCDH11XQ9BZA7 1347 aa22.83■■□□□ 1.25
CBX3P2-201ENST00000579647 PCDH11YQ9BZA8 1340 aa22.83■■□□□ 1.25
CBX3P2-201ENST00000579647 EN1Q05925 392 aaPredicted RBP22.82■■□□□ 1.24
CBX3P2-201ENST00000579647 PLEKHO1Q53GL0 409 aaPredicted RBP22.82■■□□□ 1.24
CBX3P2-201ENST00000579647 BCL11BQ9C0K0 894 aaPredicted RBP22.82■■□□□ 1.24
CBX3P2-201ENST00000579647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.82■■□□□ 1.24
CBX3P2-201ENST00000579647 SBF2Q86WG5 1849 aa22.82■■□□□ 1.24
CBX3P2-201ENST00000579647 KDRP35968 1356 aa22.82■■□□□ 1.24
CBX3P2-201ENST00000579647 PRKRIP1Q9H875 184 aaPredicted RBP22.82■■□□□ 1.24
CBX3P2-201ENST00000579647 NUDCQ9Y266 331 aa22.82■■□□□ 1.24
CBX3P2-201ENST00000579647 TNS1Q9HBL0 1735 aaKnown RBP22.8■■□□□ 1.24
CBX3P2-201ENST00000579647 MYBBP1AQ9BQG0 1328 aaKnown RBP22.79■■□□□ 1.24
CBX3P2-201ENST00000579647 PKD1L3Q7Z443 1732 aa22.79■■□□□ 1.24
CBX3P2-201ENST00000579647 IFNL2Q8IZJ0 200 aa22.79■■□□□ 1.24
CBX3P2-201ENST00000579647 PRIM1P49642 420 aaKnown RBP22.78■■□□□ 1.24
CBX3P2-201ENST00000579647 EZH2Q15910 746 aaKnown RBP22.78■■□□□ 1.24
CBX3P2-201ENST00000579647 AMOTQ4VCS5 1084 aa22.78■■□□□ 1.24
CBX3P2-201ENST00000579647 SYTL4Q96C24 671 aaPredicted RBP22.78■■□□□ 1.24
CBX3P2-201ENST00000579647 U2AF1L5P0DN76 240 aaPredicted RBP22.77■■□□□ 1.24
CBX3P2-201ENST00000579647 PHKG2P15735 406 aa22.77■■□□□ 1.24
CBX3P2-201ENST00000579647 U2AF1Q01081 240 aaKnown RBP eCLIP22.77■■□□□ 1.24
CBX3P2-201ENST00000579647 KAT6BQ8WYB5 2073 aa22.77■■□□□ 1.24
CBX3P2-201ENST00000579647 ZNF530Q6P9A1 599 aaPredicted RBP22.76■■□□□ 1.23
CBX3P2-201ENST00000579647 NKX1-1Q15270 411 aaPredicted RBP22.75■■□□□ 1.23
CBX3P2-201ENST00000579647 CAMKK2Q96RR4 588 aa22.75■■□□□ 1.23
CBX3P2-201ENST00000579647 PLEKHG2Q9H7P9 1386 aa22.74■■□□□ 1.23
CBX3P2-201ENST00000579647 NHSQ6T4R5 1651 aa22.73■■□□□ 1.23
CBX3P2-201ENST00000579647 RSPH6AQ9H0K4 717 aa22.73■■□□□ 1.23
CBX3P2-201ENST00000579647 PLSCR1O15162 318 aa22.72■■□□□ 1.23
CBX3P2-201ENST00000579647 PRKAR2BP31323 418 aa22.72■■□□□ 1.23
CBX3P2-201ENST00000579647 MTHFSDQ2M296 383 aaKnown RBP22.72■■□□□ 1.23
CBX3P2-201ENST00000579647 C1orf141Q5JVX7 400 aa22.72■■□□□ 1.23
CBX3P2-201ENST00000579647 DOT1LQ8TEK3 1739 aa22.72■■□□□ 1.23
CBX3P2-201ENST00000579647 MPRIPQ6WCQ1 1025 aa22.7■■□□□ 1.22
CBX3P2-201ENST00000579647 ANP32CO43423 234 aa22.69■■□□□ 1.22
CBX3P2-201ENST00000579647 FCHSD2O94868 740 aa22.69■■□□□ 1.22
CBX3P2-201ENST00000579647 HSP90AB1P08238 724 aaKnown RBP22.69■■□□□ 1.22
CBX3P2-201ENST00000579647 PHACTR3Q96KR7 559 aa22.69■■□□□ 1.22
CBX3P2-201ENST00000579647 AKAP4Q5JQC9 854 aa22.68■■□□□ 1.22
CBX3P2-201ENST00000579647 PROM2Q8N271 834 aa22.67■■□□□ 1.22
CBX3P2-201ENST00000579647 BTAF1O14981 1849 aa22.67■■□□□ 1.22
CBX3P2-201ENST00000579647 DCAF5Q96JK2 942 aa22.66■■□□□ 1.22
CBX3P2-201ENST00000579647 TOGARAM1Q9Y4F4 1720 aa22.66■■□□□ 1.22
CBX3P2-201ENST00000579647 TXNRD1Q16881 649 aa22.65■■□□□ 1.22
CBX3P2-201ENST00000579647 PIGBQ92521 554 aa22.65■■□□□ 1.22
CBX3P2-201ENST00000579647 GAS2L2Q8NHY3 880 aa22.64■■□□□ 1.21
CBX3P2-201ENST00000579647 LGR6Q9HBX8 967 aa22.64■■□□□ 1.21
CBX3P2-201ENST00000579647 TMOD3Q9NYL9 352 aa22.64■■□□□ 1.21
CBX3P2-201ENST00000579647 KDM6AO15550 1401 aaPredicted RBP22.63■■□□□ 1.21
CBX3P2-201ENST00000579647 ERVV-2B6SEH9 535 aa22.63■■□□□ 1.21
CBX3P2-201ENST00000579647 ITGB4P16144 1822 aa22.62■■□□□ 1.21
CBX3P2-201ENST00000579647 CABP4P57796 275 aa22.62■■□□□ 1.21
CBX3P2-201ENST00000579647 CCDC184Q52MB2 194 aa22.62■■□□□ 1.21
CBX3P2-201ENST00000579647 RNMTO43148 476 aaKnown RBP22.61■■□□□ 1.21
CBX3P2-201ENST00000579647 NEFMP07197 916 aa22.6■■□□□ 1.21
CBX3P2-201ENST00000579647 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
CBX3P2-201ENST00000579647 PLEKHF1Q96S99 279 aa22.6■■□□□ 1.21
CBX3P2-201ENST00000579647 GNAT3A8MTJ3 354 aa22.59■■□□□ 1.21
CBX3P2-201ENST00000579647 NFATC2IPQ8NCF5 419 aa22.59■■□□□ 1.21
CBX3P2-201ENST00000579647 PNNQ9H307 717 aaKnown RBP22.59■■□□□ 1.21
CBX3P2-201ENST00000579647 RREB1Q92766 1687 aa22.58■■□□□ 1.21
CBX3P2-201ENST00000579647 KCNQ4P56696 695 aa22.58■■□□□ 1.21
CBX3P2-201ENST00000579647 ASAP1Q9ULH1 1129 aa22.58■■□□□ 1.21
CBX3P2-201ENST00000579647 ADAMTS8Q9UP79 889 aa22.58■■□□□ 1.21
CBX3P2-201ENST00000579647 RGPD3A6NKT7 1758 aaPredicted RBP22.58■■□□□ 1.2
CBX3P2-201ENST00000579647 RGPD4Q7Z3J3 1758 aa22.58■■□□□ 1.2
CBX3P2-201ENST00000579647 NBPF14Q5TI25 921 aa22.57■■□□□ 1.2
CBX3P2-201ENST00000579647 LRRC4BQ9NT99 713 aa22.57■■□□□ 1.2
CBX3P2-201ENST00000579647 MAP3K5Q99683 1374 aa22.57■■□□□ 1.2
CBX3P2-201ENST00000579647 SMARCC1Q92922 1105 aaPredicted RBP22.57■■□□□ 1.2
CBX3P2-201ENST00000579647 ATG3Q9NT62 314 aa22.57■■□□□ 1.2
CBX3P2-201ENST00000579647 NUP188Q5SRE5 1749 aa22.56■■□□□ 1.2
CBX3P2-201ENST00000579647 PSDA5PKW4 1024 aaPredicted RBP22.56■■□□□ 1.2
CBX3P2-201ENST00000579647 IL17REQ8NFR9 667 aa22.56■■□□□ 1.2
CBX3P2-201ENST00000579647 PALLDQ8WX93 1383 aa22.55■■□□□ 1.2
CBX3P2-201ENST00000579647 MAPK8IP3Q9UPT6 1336 aa22.55■■□□□ 1.2
CBX3P2-201ENST00000579647 R3HDM1Q15032 1099 aaKnown RBP22.55■■□□□ 1.2
CBX3P2-201ENST00000579647 CCDC146Q8IYE0 955 aa22.55■■□□□ 1.2
CBX3P2-201ENST00000579647 SLC52A2Q9HAB3 445 aa22.55■■□□□ 1.2
CBX3P2-201ENST00000579647 CCNL1Q9UK58 526 aaPredicted RBP22.55■■□□□ 1.2
CBX3P2-201ENST00000579647 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
CBX3P2-201ENST00000579647 SLC27A3Q5K4L6 730 aa22.54■■□□□ 1.2
CBX3P2-201ENST00000579647 ANO8Q9HCE9 1232 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms