RNA–Protein interactions for RNA: ENST00000579438.1

AC005549.1-201, humanhuman

BASIC

Gene AC005549.1, Length 1,629 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005549.1-201ENST00000579438 UPF1Q92900 1129 aaKnown RBP eCLIP17.24■□□□□ 0.35
AC005549.1-201ENST00000579438 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
AC005549.1-201ENST00000579438 USP21Q9UK80 565 aa17.24■□□□□ 0.35
AC005549.1-201ENST00000579438 SHANK3Q9BYB0 1731 aa17.24■□□□□ 0.35
AC005549.1-201ENST00000579438 MEGF6O75095 1541 aa17.23■□□□□ 0.35
AC005549.1-201ENST00000579438 VPS72Q15906 364 aa17.23■□□□□ 0.35
AC005549.1-201ENST00000579438 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
AC005549.1-201ENST00000579438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.23■□□□□ 0.35
AC005549.1-201ENST00000579438 SPATA31A1Q5TZJ5 1347 aa17.23■□□□□ 0.35
AC005549.1-201ENST00000579438 SPATA31A5Q5VU36 1347 aa17.23■□□□□ 0.35
AC005549.1-201ENST00000579438 SPATA31A7Q8IWB4 1347 aa17.23■□□□□ 0.35
AC005549.1-201ENST00000579438 TMPOP42166 694 aaKnown RBP17.22■□□□□ 0.35
AC005549.1-201ENST00000579438 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
AC005549.1-201ENST00000579438 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
AC005549.1-201ENST00000579438 TATP17735 454 aaPredicted RBP17.21■□□□□ 0.35
AC005549.1-201ENST00000579438 GAS2L2Q8NHY3 880 aa17.21■□□□□ 0.35
AC005549.1-201ENST00000579438 YTHDC1Q96MU7 727 aaKnown RBP17.21■□□□□ 0.35
AC005549.1-201ENST00000579438 DISP2A7MBM2 1401 aa17.21■□□□□ 0.35
AC005549.1-201ENST00000579438 IL2RBP14784 551 aa17.21■□□□□ 0.35
AC005549.1-201ENST00000579438 NFE2L2Q16236 605 aa17.21■□□□□ 0.35
AC005549.1-201ENST00000579438 CCDC27Q2M243 656 aa17.21■□□□□ 0.35
AC005549.1-201ENST00000579438 PLEKHO1Q53GL0 409 aaPredicted RBP17.21■□□□□ 0.35
AC005549.1-201ENST00000579438 CDCA7Q9BWT1 371 aaPredicted RBP17.21■□□□□ 0.35
AC005549.1-201ENST00000579438 ATRNO75882 1429 aa17.19■□□□□ 0.34
AC005549.1-201ENST00000579438 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
AC005549.1-201ENST00000579438 MTHFSDQ2M296 383 aaKnown RBP17.19■□□□□ 0.34
AC005549.1-201ENST00000579438 BARGINQ6ZT62 677 aa17.19■□□□□ 0.34
AC005549.1-201ENST00000579438 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
AC005549.1-201ENST00000579438 RGS12O14924 1447 aa17.19■□□□□ 0.34
AC005549.1-201ENST00000579438 SCN11AQ9UI33 1791 aa17.18■□□□□ 0.34
AC005549.1-201ENST00000579438 RIPK4P57078 832 aa17.18■□□□□ 0.34
AC005549.1-201ENST00000579438 TRPC5Q9UL62 973 aaPredicted RBP17.18■□□□□ 0.34
AC005549.1-201ENST00000579438 SPG7Q9UQ90 795 aa17.18■□□□□ 0.34
AC005549.1-201ENST00000579438 ADAMTS7Q9UKP4 1686 aa17.18■□□□□ 0.34
AC005549.1-201ENST00000579438 GLI3P10071 1580 aa17.18■□□□□ 0.34
AC005549.1-201ENST00000579438 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
AC005549.1-201ENST00000579438 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
AC005549.1-201ENST00000579438 THSD7AQ9UPZ6 1657 aa17.17■□□□□ 0.34
AC005549.1-201ENST00000579438 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
AC005549.1-201ENST00000579438 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
AC005549.1-201ENST00000579438 CCDC9Q9Y3X0 531 aaKnown RBP17.17■□□□□ 0.34
AC005549.1-201ENST00000579438 ZNF521Q96K83 1311 aa17.16■□□□□ 0.34
AC005549.1-201ENST00000579438 RRP7AQ9Y3A4 280 aaKnown RBP17.16■□□□□ 0.34
AC005549.1-201ENST00000579438 WWC1Q8IX03 1113 aa17.15■□□□□ 0.34
AC005549.1-201ENST00000579438 GJD4Q96KN9 370 aaPredicted RBP17.15■□□□□ 0.34
AC005549.1-201ENST00000579438 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
AC005549.1-201ENST00000579438 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
AC005549.1-201ENST00000579438 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
AC005549.1-201ENST00000579438 AKAP4Q5JQC9 854 aa17.14■□□□□ 0.33
AC005549.1-201ENST00000579438 ZCRB1Q8TBF4 217 aaKnown RBP17.14■□□□□ 0.33
AC005549.1-201ENST00000579438 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
AC005549.1-201ENST00000579438 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
AC005549.1-201ENST00000579438 TNS2Q63HR2 1409 aa17.14■□□□□ 0.33
AC005549.1-201ENST00000579438 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
AC005549.1-201ENST00000579438 PDE3BQ13370 1112 aa17.13■□□□□ 0.33
AC005549.1-201ENST00000579438 C1orf141Q5JVX7 400 aa17.13■□□□□ 0.33
AC005549.1-201ENST00000579438 ZNF530Q6P9A1 599 aaPredicted RBP17.13■□□□□ 0.33
AC005549.1-201ENST00000579438 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
AC005549.1-201ENST00000579438 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
AC005549.1-201ENST00000579438 SIPA1L3O60292 1781 aaPredicted RBP17.13■□□□□ 0.33
AC005549.1-201ENST00000579438 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
AC005549.1-201ENST00000579438 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
AC005549.1-201ENST00000579438 EXOC5O00471 708 aa17.11■□□□□ 0.33
AC005549.1-201ENST00000579438 ONECUT3O60422 494 aaPredicted RBP17.11■□□□□ 0.33
AC005549.1-201ENST00000579438 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
AC005549.1-201ENST00000579438 HSP90AB1P08238 724 aaKnown RBP17.1■□□□□ 0.33
AC005549.1-201ENST00000579438 PHKG2P15735 406 aa17.1■□□□□ 0.33
AC005549.1-201ENST00000579438 CEMIPQ8WUJ3 1361 aa17.1■□□□□ 0.33
AC005549.1-201ENST00000579438 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
AC005549.1-201ENST00000579438 DDB1Q16531 1140 aa17.1■□□□□ 0.33
AC005549.1-201ENST00000579438 FAM98CQ17RN3 349 aaKnown RBP17.1■□□□□ 0.33
AC005549.1-201ENST00000579438 IL16Q14005 1332 aa17.09■□□□□ 0.33
AC005549.1-201ENST00000579438 CYP27B1O15528 508 aa17.09■□□□□ 0.33
AC005549.1-201ENST00000579438 NKX1-1Q15270 411 aaPredicted RBP17.08■□□□□ 0.32
AC005549.1-201ENST00000579438 ITGB4P16144 1822 aa17.08■□□□□ 0.32
AC005549.1-201ENST00000579438 BRWD3Q6RI45 1802 aa17.08■□□□□ 0.32
AC005549.1-201ENST00000579438 DCAF5Q96JK2 942 aa17.07■□□□□ 0.32
AC005549.1-201ENST00000579438 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
AC005549.1-201ENST00000579438 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
AC005549.1-201ENST00000579438 MRC1P22897 1456 aa17.06■□□□□ 0.32
AC005549.1-201ENST00000579438 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
AC005549.1-201ENST00000579438 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
AC005549.1-201ENST00000579438 MCM10Q7L590 875 aa17.06■□□□□ 0.32
AC005549.1-201ENST00000579438 DOT1LQ8TEK3 1739 aa17.05■□□□□ 0.32
AC005549.1-201ENST00000579438 E9PSI1 815 aa17.05■□□□□ 0.32
AC005549.1-201ENST00000579438 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
AC005549.1-201ENST00000579438 DCTN1Q14203 1278 aa17.05■□□□□ 0.32
AC005549.1-201ENST00000579438 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
AC005549.1-201ENST00000579438 DDX54Q8TDD1 881 aaKnown RBP17.05■□□□□ 0.32
AC005549.1-201ENST00000579438 KAT6BQ8WYB5 2073 aa17.04■□□□□ 0.32
AC005549.1-201ENST00000579438 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
AC005549.1-201ENST00000579438 GNAI1P63096 354 aa17.03■□□□□ 0.32
AC005549.1-201ENST00000579438 TRMT2AQ8IZ69 625 aaKnown RBP17.03■□□□□ 0.32
AC005549.1-201ENST00000579438 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
AC005549.1-201ENST00000579438 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
AC005549.1-201ENST00000579438 LGR6Q9HBX8 967 aa17.03■□□□□ 0.32
AC005549.1-201ENST00000579438 IFT57Q9NWB7 429 aa17.03■□□□□ 0.32
AC005549.1-201ENST00000579438 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
AC005549.1-201ENST00000579438 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
AC005549.1-201ENST00000579438 CDCA7LQ96GN5 454 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms