RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 DDX54Q8TDD1 881 aaKnown RBP28.11■■■□□ 2.09
SCO1-204ENST00000579396 AMOTQ4VCS5 1084 aa28.1■■■□□ 2.09
SCO1-204ENST00000579396 PLEKHO1Q53GL0 409 aaPredicted RBP28.1■■■□□ 2.09
SCO1-204ENST00000579396 AEBP1Q8IUX7 1158 aa28.1■■■□□ 2.09
SCO1-204ENST00000579396 BRWD3Q6RI45 1802 aa28.1■■■□□ 2.09
SCO1-204ENST00000579396 KDRP35968 1356 aa28.1■■■□□ 2.09
SCO1-204ENST00000579396 TNS2Q63HR2 1409 aa28.09■■■□□ 2.09
SCO1-204ENST00000579396 MEGF6O75095 1541 aa28.09■■■□□ 2.09
SCO1-204ENST00000579396 HMOX1P09601 288 aa28.09■■■□□ 2.09
SCO1-204ENST00000579396 U2AF1L5P0DN76 240 aaPredicted RBP28.09■■■□□ 2.09
SCO1-204ENST00000579396 U2AF1Q01081 240 aaKnown RBP eCLIP28.09■■■□□ 2.09
SCO1-204ENST00000579396 FAM182BQ5T319 152 aa28.09■■■□□ 2.09
SCO1-204ENST00000579396 CCDC125Q86Z20 511 aa28.09■■■□□ 2.09
SCO1-204ENST00000579396 WNK3Q9BYP7 1800 aa28.07■■■□□ 2.08
SCO1-204ENST00000579396 FCHSD2O94868 740 aa28.06■■■□□ 2.08
SCO1-204ENST00000579396 PCDH11XQ9BZA7 1347 aa28.06■■■□□ 2.08
SCO1-204ENST00000579396 PCDH11YQ9BZA8 1340 aa28.06■■■□□ 2.08
SCO1-204ENST00000579396 LRRC37A3O60309 1634 aa28.05■■■□□ 2.08
SCO1-204ENST00000579396 PNNQ9H307 717 aaKnown RBP28.04■■■□□ 2.08
SCO1-204ENST00000579396 BCL9O00512 1426 aa28.03■■■□□ 2.08
SCO1-204ENST00000579396 RGPD1P0DJD0 1748 aa28.03■■■□□ 2.08
SCO1-204ENST00000579396 IFNL2Q8IZJ0 200 aa28.02■■■□□ 2.08
SCO1-204ENST00000579396 CYP27B1O15528 508 aa28■■■□□ 2.07
SCO1-204ENST00000579396 SF3B2Q13435 895 aaKnown RBP28■■■□□ 2.07
SCO1-204ENST00000579396 RSPH6AQ9H0K4 717 aa28■■■□□ 2.07
SCO1-204ENST00000579396 TRIM37O94972 964 aa27.98■■■□□ 2.07
SCO1-204ENST00000579396 NEFMP07197 916 aa27.98■■■□□ 2.07
SCO1-204ENST00000579396 HSP90AB1P08238 724 aaKnown RBP27.98■■■□□ 2.07
SCO1-204ENST00000579396 WDR43Q15061 677 aaKnown RBP eCLIP27.98■■■□□ 2.07
SCO1-204ENST00000579396 NKX1-1Q15270 411 aaPredicted RBP27.98■■■□□ 2.07
SCO1-204ENST00000579396 PHKG2P15735 406 aa27.97■■■□□ 2.07
SCO1-204ENST00000579396 PRKAR2BP31323 418 aa27.97■■■□□ 2.07
SCO1-204ENST00000579396 DIEXFQ68CQ4 756 aaKnown RBP27.97■■■□□ 2.07
SCO1-204ENST00000579396 ZNF530Q6P9A1 599 aaPredicted RBP27.97■■■□□ 2.07
SCO1-204ENST00000579396 C1orf141Q5JVX7 400 aa27.96■■■□□ 2.07
SCO1-204ENST00000579396 BCL11BQ9C0K0 894 aaPredicted RBP27.96■■■□□ 2.07
SCO1-204ENST00000579396 GAS2L2Q8NHY3 880 aa27.94■■■□□ 2.06
SCO1-204ENST00000579396 MTHFSDQ2M296 383 aaKnown RBP27.93■■■□□ 2.06
SCO1-204ENST00000579396 AKAP4Q5JQC9 854 aa27.93■■■□□ 2.06
SCO1-204ENST00000579396 ACSBG1Q96GR2 724 aa27.92■■■□□ 2.06
SCO1-204ENST00000579396 MRS2Q9HD23 443 aa27.91■■■□□ 2.06
SCO1-204ENST00000579396 PKD1L3Q7Z443 1732 aa27.91■■■□□ 2.06
SCO1-204ENST00000579396 PRIM1P49642 420 aaKnown RBP27.9■■■□□ 2.06
SCO1-204ENST00000579396 DCAF5Q96JK2 942 aa27.9■■■□□ 2.06
SCO1-204ENST00000579396 PHACTR3Q96KR7 559 aa27.9■■■□□ 2.06
SCO1-204ENST00000579396 APBA3O96018 575 aa27.89■■■□□ 2.06
SCO1-204ENST00000579396 ADAMTS8Q9UP79 889 aa27.89■■■□□ 2.06
SCO1-204ENST00000579396 KCNQ2O43526 872 aa27.88■■■□□ 2.05
SCO1-204ENST00000579396 BAG6P46379 1132 aa27.88■■■□□ 2.05
SCO1-204ENST00000579396 CCDC184Q52MB2 194 aa27.88■■■□□ 2.05
SCO1-204ENST00000579396 PLEKHF1Q96S99 279 aa27.88■■■□□ 2.05
SCO1-204ENST00000579396 SYTL4Q96C24 671 aaPredicted RBP27.87■■■□□ 2.05
SCO1-204ENST00000579396 ERVV-2B6SEH9 535 aa27.86■■■□□ 2.05
SCO1-204ENST00000579396 MAPK8IP3Q9UPT6 1336 aa27.86■■■□□ 2.05
SCO1-204ENST00000579396 SHANK3Q9BYB0 1731 aa27.85■■■□□ 2.05
SCO1-204ENST00000579396 GNAT3A8MTJ3 354 aa27.84■■■□□ 2.05
SCO1-204ENST00000579396 PNISRQ8TF01 805 aaKnown RBP27.84■■■□□ 2.05
SCO1-204ENST00000579396 EP400Q96L91 3159 aa27.83■■■□□ 2.05
SCO1-204ENST00000579396 PLSCR1O15162 318 aa27.83■■■□□ 2.05
SCO1-204ENST00000579396 MPRIPQ6WCQ1 1025 aa27.83■■■□□ 2.05
SCO1-204ENST00000579396 PTF1AQ7RTS3 328 aa27.82■■■□□ 2.04
SCO1-204ENST00000579396 RUNDC1Q96C34 613 aa27.82■■■□□ 2.04
SCO1-204ENST00000579396 KAT6BQ8WYB5 2073 aa27.8■■■□□ 2.04
SCO1-204ENST00000579396 CCER2I3L3R5 266 aa27.8■■■□□ 2.04
SCO1-204ENST00000579396 HTATSF1O43719 755 aaKnown RBP27.8■■■□□ 2.04
SCO1-204ENST00000579396 CABP4P57796 275 aa27.8■■■□□ 2.04
SCO1-204ENST00000579396 TMOD3Q9NYL9 352 aa27.8■■■□□ 2.04
SCO1-204ENST00000579396 SBF2Q86WG5 1849 aa27.79■■■□□ 2.04
SCO1-204ENST00000579396 RNMTO43148 476 aaKnown RBP27.79■■■□□ 2.04
SCO1-204ENST00000579396 DEFB132Q7Z7B7 95 aa27.79■■■□□ 2.04
SCO1-204ENST00000579396 RTF1Q92541 710 aaKnown RBP27.79■■■□□ 2.04
SCO1-204ENST00000579396 EN1Q05925 392 aaPredicted RBP27.78■■■□□ 2.04
SCO1-204ENST00000579396 NFE2L2Q16236 605 aa27.78■■■□□ 2.04
SCO1-204ENST00000579396 LGR6Q9HBX8 967 aa27.78■■■□□ 2.04
SCO1-204ENST00000579396 MAP3K5Q99683 1374 aa27.77■■■□□ 2.04
SCO1-204ENST00000579396 PIGBQ92521 554 aa27.77■■■□□ 2.04
SCO1-204ENST00000579396 CCDC146Q8IYE0 955 aa27.76■■■□□ 2.03
SCO1-204ENST00000579396 CAMKK2Q96RR4 588 aa27.76■■■□□ 2.03
SCO1-204ENST00000579396 SMARCC1Q92922 1105 aaPredicted RBP27.75■■■□□ 2.03
SCO1-204ENST00000579396 NFATC2IPQ8NCF5 419 aa27.74■■■□□ 2.03
SCO1-204ENST00000579396 IL17REQ8NFR9 667 aa27.74■■■□□ 2.03
SCO1-204ENST00000579396 NHSQ6T4R5 1651 aa27.74■■■□□ 2.03
SCO1-204ENST00000579396 KDM6AO15550 1401 aaPredicted RBP27.74■■■□□ 2.03
SCO1-204ENST00000579396 SLC52A2Q9HAB3 445 aa27.73■■■□□ 2.03
SCO1-204ENST00000579396 TMPOP42166 694 aaKnown RBP27.72■■■□□ 2.03
SCO1-204ENST00000579396 RIPK4P57078 832 aa27.72■■■□□ 2.03
SCO1-204ENST00000579396 EZH2Q15910 746 aaKnown RBP27.72■■■□□ 2.03
SCO1-204ENST00000579396 TEFQ10587 303 aa27.71■■■□□ 2.03
SCO1-204ENST00000579396 MIER1Q8N108 512 aa27.71■■■□□ 2.03
SCO1-204ENST00000579396 HMGB2P26583 209 aaKnown RBP27.7■■■□□ 2.02
SCO1-204ENST00000579396 LMOD3Q0VAK6 560 aa27.7■■■□□ 2.02
SCO1-204ENST00000579396 DOT1LQ8TEK3 1739 aa27.7■■■□□ 2.02
SCO1-204ENST00000579396 FAM9BQ8IZU0 186 aa27.69■■■□□ 2.02
SCO1-204ENST00000579396 TNS1Q9HBL0 1735 aaKnown RBP27.69■■■□□ 2.02
SCO1-204ENST00000579396 TXNRD1Q16881 649 aa27.68■■■□□ 2.02
SCO1-204ENST00000579396 SLC27A3Q5K4L6 730 aa27.67■■■□□ 2.02
SCO1-204ENST00000579396 CEMIPQ8WUJ3 1361 aa27.66■■■□□ 2.02
SCO1-204ENST00000579396 APAF1O14727 1248 aa27.66■■■□□ 2.02
SCO1-204ENST00000579396 NEUROD2Q15784 382 aa27.66■■■□□ 2.02
SCO1-204ENST00000579396 MCM10Q7L590 875 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms