RNA–Protein interactions for RNA: ENST00000579243.1

USH1G-201, Transcript of USH1 protein network component sans, humanhuman

TSL 2

Gene USH1G, Length 1,673 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1G-201ENST00000579243 RAPGEF4Q8WZA2 1011 aa27■■□□□ 1.91
USH1G-201ENST00000579243 ZCRB1Q8TBF4 217 aaKnown RBP26.99■■□□□ 1.91
USH1G-201ENST00000579243 PRKRIP1Q9H875 184 aaPredicted RBP26.99■■□□□ 1.91
USH1G-201ENST00000579243 DDX54Q8TDD1 881 aaKnown RBP26.98■■□□□ 1.91
USH1G-201ENST00000579243 NCAPD2Q15021 1401 aa26.98■■□□□ 1.91
USH1G-201ENST00000579243 TATP17735 454 aaPredicted RBP26.98■■□□□ 1.91
USH1G-201ENST00000579243 BCL11BQ9C0K0 894 aaPredicted RBP26.98■■□□□ 1.91
USH1G-201ENST00000579243 CNGB1Q14028 1251 aaPredicted RBP26.97■■□□□ 1.91
USH1G-201ENST00000579243 PTF1AQ7RTS3 328 aa26.96■■□□□ 1.91
USH1G-201ENST00000579243 SBF2Q86WG5 1849 aa26.96■■□□□ 1.91
USH1G-201ENST00000579243 CAMKK2Q96RR4 588 aa26.95■■□□□ 1.91
USH1G-201ENST00000579243 MTHFSP49914 203 aa26.95■■□□□ 1.9
USH1G-201ENST00000579243 EZH2Q15910 746 aaKnown RBP26.94■■□□□ 1.9
USH1G-201ENST00000579243 KCNQ2O43526 872 aa26.92■■□□□ 1.9
USH1G-201ENST00000579243 ACSBG1Q96GR2 724 aa26.92■■□□□ 1.9
USH1G-201ENST00000579243 IGSF1Q8N6C5 1336 aa26.91■■□□□ 1.9
USH1G-201ENST00000579243 PLSCR1O15162 318 aa26.89■■□□□ 1.89
USH1G-201ENST00000579243 IL13P35225 146 aa26.89■■□□□ 1.89
USH1G-201ENST00000579243 PARD3Q8TEW0 1356 aa26.89■■□□□ 1.89
USH1G-201ENST00000579243 SHANK3Q9BYB0 1731 aa26.88■■□□□ 1.89
USH1G-201ENST00000579243 PCDH11XQ9BZA7 1347 aa26.86■■□□□ 1.89
USH1G-201ENST00000579243 PCDH11YQ9BZA8 1340 aa26.86■■□□□ 1.89
USH1G-201ENST00000579243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.85■■□□□ 1.89
USH1G-201ENST00000579243 CYP27B1O15528 508 aa26.84■■□□□ 1.89
USH1G-201ENST00000579243 SPG7Q9UQ90 795 aa26.84■■□□□ 1.89
USH1G-201ENST00000579243 NHSQ6T4R5 1651 aa26.83■■□□□ 1.89
USH1G-201ENST00000579243 AEBP1Q8IUX7 1158 aa26.82■■□□□ 1.88
USH1G-201ENST00000579243 KAT6BQ8WYB5 2073 aa26.81■■□□□ 1.88
USH1G-201ENST00000579243 PRIM1P49642 420 aaKnown RBP26.81■■□□□ 1.88
USH1G-201ENST00000579243 PKD1L3Q7Z443 1732 aa26.8■■□□□ 1.88
USH1G-201ENST00000579243 DIAPH1O60610 1272 aaKnown RBP26.8■■□□□ 1.88
USH1G-201ENST00000579243 SULT6B1Q6IMI4 303 aa26.8■■□□□ 1.88
USH1G-201ENST00000579243 PLEKHG2Q9H7P9 1386 aa26.8■■□□□ 1.88
USH1G-201ENST00000579243 PROM2Q8N271 834 aa26.79■■□□□ 1.88
USH1G-201ENST00000579243 SYTL4Q96C24 671 aaPredicted RBP26.79■■□□□ 1.88
USH1G-201ENST00000579243 KDRP35968 1356 aa26.78■■□□□ 1.88
USH1G-201ENST00000579243 PPP2R1AP30153 589 aa26.78■■□□□ 1.88
USH1G-201ENST00000579243 RREB1Q92766 1687 aa26.77■■□□□ 1.88
USH1G-201ENST00000579243 NKX1-1Q15270 411 aaPredicted RBP26.77■■□□□ 1.88
USH1G-201ENST00000579243 RALBP1Q15311 655 aa26.77■■□□□ 1.88
USH1G-201ENST00000579243 RGPD3A6NKT7 1758 aaPredicted RBP26.77■■□□□ 1.88
USH1G-201ENST00000579243 RGPD4Q7Z3J3 1758 aa26.77■■□□□ 1.88
USH1G-201ENST00000579243 COL3A1P02461 1466 aaPredicted RBP26.75■■□□□ 1.87
USH1G-201ENST00000579243 PHKG2P15735 406 aa26.75■■□□□ 1.87
USH1G-201ENST00000579243 TXNRD1Q16881 649 aa26.75■■□□□ 1.87
USH1G-201ENST00000579243 PLEKHO1Q53GL0 409 aaPredicted RBP26.75■■□□□ 1.87
USH1G-201ENST00000579243 IFNL2Q8IZJ0 200 aa26.75■■□□□ 1.87
USH1G-201ENST00000579243 DOT1LQ8TEK3 1739 aa26.74■■□□□ 1.87
USH1G-201ENST00000579243 MRS2Q9HD23 443 aa26.74■■□□□ 1.87
USH1G-201ENST00000579243 BTAF1O14981 1849 aa26.74■■□□□ 1.87
USH1G-201ENST00000579243 AMOTQ4VCS5 1084 aa26.73■■□□□ 1.87
USH1G-201ENST00000579243 CCDC184Q52MB2 194 aa26.73■■□□□ 1.87
USH1G-201ENST00000579243 PSDA5PKW4 1024 aaPredicted RBP26.73■■□□□ 1.87
USH1G-201ENST00000579243 NBPF14Q5TI25 921 aa26.73■■□□□ 1.87
USH1G-201ENST00000579243 SRCAPQ6ZRS2 3230 aa26.72■■□□□ 1.87
USH1G-201ENST00000579243 MYBBP1AQ9BQG0 1328 aaKnown RBP26.72■■□□□ 1.87
USH1G-201ENST00000579243 NUP188Q5SRE5 1749 aa26.72■■□□□ 1.87
USH1G-201ENST00000579243 HMOX1P09601 288 aa26.72■■□□□ 1.87
USH1G-201ENST00000579243 R3HDM1Q15032 1099 aaKnown RBP26.72■■□□□ 1.87
USH1G-201ENST00000579243 CFAP53Q96M91 514 aa26.72■■□□□ 1.87
USH1G-201ENST00000579243 U2SURPO15042 1029 aaKnown RBP26.68■■□□□ 1.86
USH1G-201ENST00000579243 ZNF530Q6P9A1 599 aaPredicted RBP26.68■■□□□ 1.86
USH1G-201ENST00000579243 MPRIPQ6WCQ1 1025 aa26.68■■□□□ 1.86
USH1G-201ENST00000579243 TOGARAM1Q9Y4F4 1720 aa26.65■■□□□ 1.86
USH1G-201ENST00000579243 HSP90AB1P08238 724 aaKnown RBP26.65■■□□□ 1.86
USH1G-201ENST00000579243 ANO8Q9HCE9 1232 aaPredicted RBP26.65■■□□□ 1.86
USH1G-201ENST00000579243 PIGBQ92521 554 aa26.64■■□□□ 1.86
USH1G-201ENST00000579243 LRRC4BQ9NT99 713 aa26.64■■□□□ 1.86
USH1G-201ENST00000579243 SLC27A3Q5K4L6 730 aa26.63■■□□□ 1.85
USH1G-201ENST00000579243 DCAF5Q96JK2 942 aa26.63■■□□□ 1.85
USH1G-201ENST00000579243 NUDCQ9Y266 331 aa26.63■■□□□ 1.85
USH1G-201ENST00000579243 C1orf141Q5JVX7 400 aa26.63■■□□□ 1.85
USH1G-201ENST00000579243 ITGB4P16144 1822 aa26.61■■□□□ 1.85
USH1G-201ENST00000579243 ERVV-2B6SEH9 535 aa26.6■■□□□ 1.85
USH1G-201ENST00000579243 TMOD3Q9NYL9 352 aa26.6■■□□□ 1.85
USH1G-201ENST00000579243 MTHFSDQ2M296 383 aaKnown RBP26.59■■□□□ 1.85
USH1G-201ENST00000579243 AKAP4Q5JQC9 854 aa26.59■■□□□ 1.85
USH1G-201ENST00000579243 KDM6AO15550 1401 aaPredicted RBP26.58■■□□□ 1.85
USH1G-201ENST00000579243 KCNQ4P56696 695 aa26.58■■□□□ 1.85
USH1G-201ENST00000579243 SLC15A2Q16348 729 aa26.58■■□□□ 1.85
USH1G-201ENST00000579243 STK32BQ9NY57 414 aa26.58■■□□□ 1.85
USH1G-201ENST00000579243 SMARCC1Q92922 1105 aaPredicted RBP26.57■■□□□ 1.84
USH1G-201ENST00000579243 PALLDQ8WX93 1383 aa26.57■■□□□ 1.84
USH1G-201ENST00000579243 LY75O60449 1722 aa26.57■■□□□ 1.84
USH1G-201ENST00000579243 U2AF1L5P0DN76 240 aaPredicted RBP26.57■■□□□ 1.84
USH1G-201ENST00000579243 U2AF1Q01081 240 aaKnown RBP eCLIP26.57■■□□□ 1.84
USH1G-201ENST00000579243 FAM9BQ8IZU0 186 aa26.57■■□□□ 1.84
USH1G-201ENST00000579243 CCNL1Q9UK58 526 aaPredicted RBP26.57■■□□□ 1.84
USH1G-201ENST00000579243 RSPH6AQ9H0K4 717 aa26.56■■□□□ 1.84
USH1G-201ENST00000579243 PAPPAQ13219 1627 aa26.54■■□□□ 1.84
USH1G-201ENST00000579243 PRKAR2BP31323 418 aa26.54■■□□□ 1.84
USH1G-201ENST00000579243 CABP4P57796 275 aa26.54■■□□□ 1.84
USH1G-201ENST00000579243 ASAP1Q9ULH1 1129 aa26.54■■□□□ 1.84
USH1G-201ENST00000579243 FCHSD2O94868 740 aa26.53■■□□□ 1.84
USH1G-201ENST00000579243 HNRNPUQ00839 825 aaKnown RBP eCLIP26.53■■□□□ 1.84
USH1G-201ENST00000579243 ZNF827Q17R98 1081 aa26.52■■□□□ 1.84
USH1G-201ENST00000579243 AKT1S1Q96B36 256 aa26.52■■□□□ 1.84
USH1G-201ENST00000579243 PHACTR3Q96KR7 559 aa26.52■■□□□ 1.84
USH1G-201ENST00000579243 ATG3Q9NT62 314 aa26.52■■□□□ 1.84
USH1G-201ENST00000579243 LGR6Q9HBX8 967 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms