RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 DOT1LQ8TEK3 1739 aa26.93■■□□□ 1.9
CDKN2A-213ENST00000579122 FYB1O15117 783 aa26.92■■□□□ 1.9
CDKN2A-213ENST00000579122 TMF1P82094 1093 aa26.92■■□□□ 1.9
CDKN2A-213ENST00000579122 SHANK3Q9BYB0 1731 aa26.92■■□□□ 1.9
CDKN2A-213ENST00000579122 RGPD2P0DJD1 1756 aa26.92■■□□□ 1.9
CDKN2A-213ENST00000579122 PNPLA7Q6ZV29 1317 aa26.91■■□□□ 1.9
CDKN2A-213ENST00000579122 CGNL1Q0VF96 1302 aa26.9■■□□□ 1.9
CDKN2A-213ENST00000579122 RRS1Q15050 365 aaKnown RBP26.9■■□□□ 1.9
CDKN2A-213ENST00000579122 NBPF6Q5VWK0 638 aa26.9■■□□□ 1.9
CDKN2A-213ENST00000579122 ZNF784Q8NCA9 323 aaPredicted RBP26.9■■□□□ 1.9
CDKN2A-213ENST00000579122 NBPF4Q96M43 638 aa26.9■■□□□ 1.9
CDKN2A-213ENST00000579122 GGNBP2Q9H3C7 697 aa26.9■■□□□ 1.9
CDKN2A-213ENST00000579122 TFCP2L1Q9NZI6 479 aa26.9■■□□□ 1.9
CDKN2A-213ENST00000579122 LY75O60449 1722 aa26.9■■□□□ 1.9
CDKN2A-213ENST00000579122 POLD1P28340 1107 aa26.89■■□□□ 1.9
CDKN2A-213ENST00000579122 SMG6Q86US8 1419 aaKnown RBP26.89■■□□□ 1.89
CDKN2A-213ENST00000579122 COL24A1Q17RW2 1714 aa26.88■■□□□ 1.89
CDKN2A-213ENST00000579122 USP47Q96K76 1375 aa26.87■■□□□ 1.89
CDKN2A-213ENST00000579122 KCNQ4P56696 695 aa26.87■■□□□ 1.89
CDKN2A-213ENST00000579122 RAPGEF4Q8WZA2 1011 aa26.86■■□□□ 1.89
CDKN2A-213ENST00000579122 USHBP1Q8N6Y0 703 aa26.85■■□□□ 1.89
CDKN2A-213ENST00000579122 CCNL1Q9UK58 526 aaPredicted RBP26.85■■□□□ 1.89
CDKN2A-213ENST00000579122 TUBGCP6Q96RT7 1819 aa26.85■■□□□ 1.89
CDKN2A-213ENST00000579122 CHD4Q14839 1912 aa26.84■■□□□ 1.89
CDKN2A-213ENST00000579122 INSRP06213 1382 aa26.84■■□□□ 1.89
CDKN2A-213ENST00000579122 KIF24Q5T7B8 1368 aa26.84■■□□□ 1.89
CDKN2A-213ENST00000579122 CDCA8Q53HL2 280 aa26.83■■□□□ 1.89
CDKN2A-213ENST00000579122 TATP17735 454 aaPredicted RBP26.82■■□□□ 1.88
CDKN2A-213ENST00000579122 GPR162Q16538 588 aa26.82■■□□□ 1.88
CDKN2A-213ENST00000579122 HSP90AB2PQ58FF8 381 aa26.81■■□□□ 1.88
CDKN2A-213ENST00000579122 GOLGB1Q14789 3259 aaKnown RBP26.81■■□□□ 1.88
CDKN2A-213ENST00000579122 FLT4P35916 1363 aa26.81■■□□□ 1.88
CDKN2A-213ENST00000579122 KLHL34Q8N239 644 aa26.8■■□□□ 1.88
CDKN2A-213ENST00000579122 KIF20BQ96Q89 1820 aa26.8■■□□□ 1.88
CDKN2A-213ENST00000579122 PCDH11XQ9BZA7 1347 aa26.79■■□□□ 1.88
CDKN2A-213ENST00000579122 PCDH11YQ9BZA8 1340 aa26.79■■□□□ 1.88
CDKN2A-213ENST00000579122 HMGB2P26583 209 aaKnown RBP26.76■■□□□ 1.87
CDKN2A-213ENST00000579122 COL23A1Q86Y22 540 aaPredicted RBP26.75■■□□□ 1.87
CDKN2A-213ENST00000579122 MSH5O43196 834 aa26.74■■□□□ 1.87
CDKN2A-213ENST00000579122 NLGN2Q8NFZ4 835 aa26.73■■□□□ 1.87
CDKN2A-213ENST00000579122 CARD14Q9BXL6 1004 aa26.73■■□□□ 1.87
CDKN2A-213ENST00000579122 PELP1Q8IZL8 1130 aaKnown RBP26.72■■□□□ 1.87
CDKN2A-213ENST00000579122 C5P01031 1676 aa26.72■■□□□ 1.87
CDKN2A-213ENST00000579122 PALLDQ8WX93 1383 aa26.71■■□□□ 1.87
CDKN2A-213ENST00000579122 CYP27B1O15528 508 aa26.71■■□□□ 1.87
CDKN2A-213ENST00000579122 TRIM26Q12899 539 aaPredicted RBP26.71■■□□□ 1.87
CDKN2A-213ENST00000579122 NSD3Q9BZ95 1437 aa26.71■■□□□ 1.87
CDKN2A-213ENST00000579122 MPRIPQ6WCQ1 1025 aa26.7■■□□□ 1.86
CDKN2A-213ENST00000579122 FLAD1Q8NFF5 587 aa26.7■■□□□ 1.86
CDKN2A-213ENST00000579122 EMILIN1Q9Y6C2 1016 aa26.7■■□□□ 1.86
CDKN2A-213ENST00000579122 NCAPD2Q15021 1401 aa26.69■■□□□ 1.86
CDKN2A-213ENST00000579122 PKD1L3Q7Z443 1732 aa26.68■■□□□ 1.86
CDKN2A-213ENST00000579122 SMARCC1Q92922 1105 aaPredicted RBP26.67■■□□□ 1.86
CDKN2A-213ENST00000579122 TOGARAM1Q9Y4F4 1720 aa26.66■■□□□ 1.86
CDKN2A-213ENST00000579122 C1QTNF8P60827 252 aa26.66■■□□□ 1.86
CDKN2A-213ENST00000579122 TAF1LQ8IZX4 1826 aa26.65■■□□□ 1.86
CDKN2A-213ENST00000579122 GRIN3BO60391 1043 aa26.65■■□□□ 1.86
CDKN2A-213ENST00000579122 NKX1-1Q15270 411 aaPredicted RBP26.65■■□□□ 1.86
CDKN2A-213ENST00000579122 MSL1Q68DK7 614 aa26.65■■□□□ 1.86
CDKN2A-213ENST00000579122 TIMELESSQ9UNS1 1208 aa26.65■■□□□ 1.86
CDKN2A-213ENST00000579122 ANKRD26Q9UPS8 1709 aa26.65■■□□□ 1.86
CDKN2A-213ENST00000579122 WASHC2AQ641Q2 1341 aa26.64■■□□□ 1.85
CDKN2A-213ENST00000579122 PPM1GO15355 546 aaPredicted RBP26.63■■□□□ 1.85
CDKN2A-213ENST00000579122 SPG7Q9UQ90 795 aa26.63■■□□□ 1.85
CDKN2A-213ENST00000579122 ITGB4P16144 1822 aa26.62■■□□□ 1.85
CDKN2A-213ENST00000579122 YBX3P16989 372 aaKnown RBP eCLIP26.62■■□□□ 1.85
CDKN2A-213ENST00000579122 PIGBQ92521 554 aa26.62■■□□□ 1.85
CDKN2A-213ENST00000579122 CD2APQ9Y5K6 639 aa26.62■■□□□ 1.85
CDKN2A-213ENST00000579122 C4BP0C0L5 1744 aa26.62■■□□□ 1.85
CDKN2A-213ENST00000579122 AK7Q96M32 723 aa26.61■■□□□ 1.85
CDKN2A-213ENST00000579122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.6■■□□□ 1.85
CDKN2A-213ENST00000579122 SENP3-EIF4A1A0A087X0R7 540 aa26.59■■□□□ 1.85
CDKN2A-213ENST00000579122 EYA1Q99502 592 aa26.59■■□□□ 1.85
CDKN2A-213ENST00000579122 GIGYF1O75420 1035 aaPredicted RBP26.58■■□□□ 1.85
CDKN2A-213ENST00000579122 POLKQ9UBT6 870 aa26.57■■□□□ 1.84
CDKN2A-213ENST00000579122 AMIGO3Q86WK7 504 aa26.55■■□□□ 1.84
CDKN2A-213ENST00000579122 MAP2P11137 1827 aaKnown RBP26.55■■□□□ 1.84
CDKN2A-213ENST00000579122 UBR3Q6ZT12 1888 aa26.54■■□□□ 1.84
CDKN2A-213ENST00000579122 LOC102724428A0A0B4J2F2 783 aa26.54■■□□□ 1.84
CDKN2A-213ENST00000579122 SSFA2P28290 1259 aa26.54■■□□□ 1.84
CDKN2A-213ENST00000579122 SIK1P57059 783 aa26.54■■□□□ 1.84
CDKN2A-213ENST00000579122 TMOD3Q9NYL9 352 aa26.54■■□□□ 1.84
CDKN2A-213ENST00000579122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.53■■□□□ 1.84
CDKN2A-213ENST00000579122 PHKG2P15735 406 aa26.53■■□□□ 1.84
CDKN2A-213ENST00000579122 IFNL2Q8IZJ0 200 aa26.53■■□□□ 1.84
CDKN2A-213ENST00000579122 PHF14O94880 888 aa26.52■■□□□ 1.84
CDKN2A-213ENST00000579122 LINC00116Q8NCU8 138 aa26.52■■□□□ 1.84
CDKN2A-213ENST00000579122 PLEKHG2Q9H7P9 1386 aa26.52■■□□□ 1.84
CDKN2A-213ENST00000579122 CLSPNQ9HAW4 1339 aa26.51■■□□□ 1.83
CDKN2A-213ENST00000579122 ASAP1Q9ULH1 1129 aa26.5■■□□□ 1.83
CDKN2A-213ENST00000579122 EIF4A2Q14240 407 aaKnown RBP26.49■■□□□ 1.83
CDKN2A-213ENST00000579122 SMIM5Q71RC9 77 aa26.49■■□□□ 1.83
CDKN2A-213ENST00000579122 ATP6V1AP38606 617 aa26.47■■□□□ 1.83
CDKN2A-213ENST00000579122 ITPK1Q13572 414 aa26.47■■□□□ 1.83
CDKN2A-213ENST00000579122 POLR3GLQ9BT43 218 aa26.47■■□□□ 1.83
CDKN2A-213ENST00000579122 TNNT2P45379 298 aaPredicted RBP26.46■■□□□ 1.83
CDKN2A-213ENST00000579122 ATG3Q9NT62 314 aa26.46■■□□□ 1.83
CDKN2A-213ENST00000579122 ATP10DQ9P241 1426 aa26.46■■□□□ 1.83
CDKN2A-213ENST00000579122 GNPATO15228 680 aa26.45■■□□□ 1.82
CDKN2A-213ENST00000579122 IGSF1Q8N6C5 1336 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms