RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 NASPP49321 788 aaPredicted RBP5.99□□□□□ -1.45
NF1-219ENST00000579081 TNIP1Q15025 636 aa5.99□□□□□ -1.45
NF1-219ENST00000579081 PAIP2Q9BPZ3 127 aaKnown RBP5.99□□□□□ -1.45
NF1-219ENST00000579081 HOMER2Q9NSB8 354 aa5.99□□□□□ -1.45
NF1-219ENST00000579081 LRRFIP2Q9Y608 721 aaKnown RBP5.99□□□□□ -1.45
NF1-219ENST00000579081 KIAA1328Q86T90 577 aa5.99□□□□□ -1.45
NF1-219ENST00000579081 SPATS2Q86XZ4 545 aaKnown RBP5.99□□□□□ -1.45
NF1-219ENST00000579081 GIMAP7Q8NHV1 300 aa5.99□□□□□ -1.45
NF1-219ENST00000579081 DDX23Q9BUQ8 820 aaKnown RBP5.99□□□□□ -1.45
NF1-219ENST00000579081 FAM114A2Q9NRY5 505 aa5.99□□□□□ -1.45
NF1-219ENST00000579081 ZSCAN25Q6NSZ9 544 aa5.99□□□□□ -1.45
NF1-219ENST00000579081 WDR70Q9NW82 654 aa5.99□□□□□ -1.45
NF1-219ENST00000579081 CGNQ9P2M7 1197 aaKnown RBP5.99□□□□□ -1.45
NF1-219ENST00000579081 TUBB2AQ13885 445 aa5.99□□□□□ -1.45
NF1-219ENST00000579081 TUBB2BQ9BVA1 445 aa5.99□□□□□ -1.45
NF1-219ENST00000579081 PLEKHO1Q53GL0 409 aaPredicted RBP5.98□□□□□ -1.45
NF1-219ENST00000579081 CCDC30Q5VVM6 783 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 MIPOL1Q8TD10 442 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 CCDC102AQ96A19 550 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 RUNDC1Q96C34 613 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 LRRCC1Q9C099 1032 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 FMNL3Q8IVF7 1028 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 PPP1R12BO60237 982 aaPredicted RBP5.98□□□□□ -1.45
NF1-219ENST00000579081 MICALCLQ6ZW33 695 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 CEP120Q8N960 986 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 TMCO5BA8MYB1 307 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 MNAT1P51948 309 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 EIF5P55010 431 aaKnown RBP5.98□□□□□ -1.45
NF1-219ENST00000579081 SLMAPQ14BN4 828 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 SH2D4BQ5SQS7 431 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.98□□□□□ -1.45
NF1-219ENST00000579081 HMOX1P09601 288 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 NUTM2GQ5VZR2 741 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 SPATA24Q86W54 205 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 C10orf67Q8IYJ2 551 aa5.98□□□□□ -1.45
NF1-219ENST00000579081 USP5P45974 858 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 DRC1Q96MC2 740 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 SRRTQ9BXP5 876 aaKnown RBP5.97□□□□□ -1.45
NF1-219ENST00000579081 ST20-MTHFSA0A0A6YYL1 179 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 DYNC1I1O14576 645 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 FAM177A1Q8N128 213 aaPredicted RBP5.97□□□□□ -1.45
NF1-219ENST00000579081 CCDC113Q9H0I3 377 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 STRN4Q9NRL3 753 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 SWAP70Q9UH65 585 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 FIBPO43427 364 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 PSMD1Q99460 953 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 SEC63Q9UGP8 760 aaKnown RBP5.97□□□□□ -1.45
NF1-219ENST00000579081 CFAP45Q9UL16 551 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 TATP17735 454 aaPredicted RBP5.97□□□□□ -1.45
NF1-219ENST00000579081 CCDC50Q8IVM0 306 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 YEATS2Q9ULM3 1422 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 MYCNP04198 464 aaPredicted RBP5.97□□□□□ -1.45
NF1-219ENST00000579081 ME1P48163 572 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 NFKBIBQ15653 356 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 APLFQ8IW19 511 aaPredicted RBP5.97□□□□□ -1.45
NF1-219ENST00000579081 SSX2IPQ9Y2D8 614 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 NLRP6P59044 892 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 CEP57L1Q8IYX8 460 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 CCDC148Q8NFR7 591 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 NUTM2BA6NNL0 878 aaPredicted RBP5.97□□□□□ -1.45
NF1-219ENST00000579081 NUTM2EB1AL46 878 aaPredicted RBP5.97□□□□□ -1.45
NF1-219ENST00000579081 MYO1BO43795 1136 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 NEK4P51957 841 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 STK3Q13188 491 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 ANKRD1Q15327 319 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 NUTM2AQ8IVF1 878 aaPredicted RBP5.97□□□□□ -1.45
NF1-219ENST00000579081 GAS2L2Q8NHY3 880 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 MPHOSPH8Q99549 860 aa5.97□□□□□ -1.45
NF1-219ENST00000579081 FERP16591 822 aa5.96□□□□□ -1.45
NF1-219ENST00000579081 PRDM2Q13029 1718 aa5.96□□□□□ -1.45
NF1-219ENST00000579081 GSTTP1A0A1W2PQM5 241 aa5.96□□□□□ -1.45
NF1-219ENST00000579081 CDKL5O76039 1030 aa5.96□□□□□ -1.45
NF1-219ENST00000579081 LARP1Q6PKG0 1096 aaKnown RBP5.96□□□□□ -1.45
NF1-219ENST00000579081 ZNF397Q8NF99 534 aaPredicted RBP5.96□□□□□ -1.45
NF1-219ENST00000579081 UBAC1Q9BSL1 405 aa5.96□□□□□ -1.45
NF1-219ENST00000579081 TNMDQ9H2S6 317 aa5.96□□□□□ -1.45
NF1-219ENST00000579081 CYP46A1Q9Y6A2 500 aa5.96□□□□□ -1.45
NF1-219ENST00000579081 CCDC192P0DO97 292 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 CROCCP2Q86T23 111 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 UTP14AQ9BVJ6 771 aaKnown RBP5.96□□□□□ -1.46
NF1-219ENST00000579081 RAI14Q9P0K7 980 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 IQSEC3Q9UPP2 1182 aaPredicted RBP5.96□□□□□ -1.46
NF1-219ENST00000579081 GPRASP1Q5JY77 1395 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 LIG1P18858 919 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 RBM25P49756 843 aaKnown RBP5.96□□□□□ -1.46
NF1-219ENST00000579081 SMC1AQ14683 1233 aaKnown RBP5.96□□□□□ -1.46
NF1-219ENST00000579081 MAP9Q49MG5 647 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 CFAP65Q6ZU64 1925 aaKnown RBP5.96□□□□□ -1.46
NF1-219ENST00000579081 CCDC150Q8NCX0 1101 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 FERMT2Q96AC1 680 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 RASSF4Q9H2L5 321 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 AQRO60306 1485 aaKnown RBP eCLIP5.96□□□□□ -1.462e-6■■■■■ 29.2
NF1-219ENST00000579081 BRD4O60885 1362 aaPredicted RBP5.96□□□□□ -1.46
NF1-219ENST00000579081 TDO2P48775 406 aa5.96□□□□□ -1.46
NF1-219ENST00000579081 CABP4P57796 275 aa5.95□□□□□ -1.46
NF1-219ENST00000579081 UBE4AQ14139 1066 aa5.95□□□□□ -1.46
NF1-219ENST00000579081 PUS7Q96PZ0 661 aaKnown RBP5.95□□□□□ -1.46
NF1-219ENST00000579081 WDR78Q5VTH9 848 aa5.95□□□□□ -1.46
NF1-219ENST00000579081 CTNNBL1Q8WYA6 563 aaPredicted RBP5.95□□□□□ -1.46
NF1-219ENST00000579081 WASF1Q92558 559 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms