RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 DDX54Q8TDD1 881 aaKnown RBP15.97■□□□□ 0.15
SSH2-208ENST00000579040 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
SSH2-208ENST00000579040 STK32BQ9NY57 414 aa15.97■□□□□ 0.15
SSH2-208ENST00000579040 HSPA5P11021 654 aaKnown RBP15.96■□□□□ 0.15
SSH2-208ENST00000579040 LY75O60449 1722 aa15.95■□□□□ 0.14
SSH2-208ENST00000579040 HSP90AB2PQ58FF8 381 aa15.95■□□□□ 0.14
SSH2-208ENST00000579040 RAPGEF4Q8WZA2 1011 aa15.95■□□□□ 0.14
SSH2-208ENST00000579040 QSER1Q2KHR3 1735 aa15.94■□□□□ 0.14
SSH2-208ENST00000579040 PKD1L3Q7Z443 1732 aa15.94■□□□□ 0.14
SSH2-208ENST00000579040 SLC15A2Q16348 729 aa15.94■□□□□ 0.14
SSH2-208ENST00000579040 NCAPD2Q15021 1401 aa15.94■□□□□ 0.14
SSH2-208ENST00000579040 TATP17735 454 aaPredicted RBP15.93■□□□□ 0.14
SSH2-208ENST00000579040 USHBP1Q8N6Y0 703 aa15.93■□□□□ 0.14
SSH2-208ENST00000579040 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
SSH2-208ENST00000579040 EMILIN1Q9Y6C2 1016 aa15.93■□□□□ 0.14
SSH2-208ENST00000579040 PPP1R1BQ9UD71 204 aaPredicted RBP15.92■□□□□ 0.14
SSH2-208ENST00000579040 WASHC2AQ641Q2 1341 aa15.92■□□□□ 0.14
SSH2-208ENST00000579040 SLC27A3Q5K4L6 730 aa15.91■□□□□ 0.14
SSH2-208ENST00000579040 PCDH11XQ9BZA7 1347 aa15.91■□□□□ 0.14
SSH2-208ENST00000579040 PCDH11YQ9BZA8 1340 aa15.91■□□□□ 0.14
SSH2-208ENST00000579040 NSD2O96028 1365 aa15.9■□□□□ 0.14
SSH2-208ENST00000579040 PRIM1P49642 420 aaKnown RBP15.9■□□□□ 0.14
SSH2-208ENST00000579040 SYTL4Q96C24 671 aaPredicted RBP15.9■□□□□ 0.14
SSH2-208ENST00000579040 ITGB4P16144 1822 aa15.89■□□□□ 0.13
SSH2-208ENST00000579040 PPM1GO15355 546 aaPredicted RBP15.89■□□□□ 0.13
SSH2-208ENST00000579040 PDGFDQ9GZP0 370 aaPredicted RBP15.89■□□□□ 0.13
SSH2-208ENST00000579040 TUBGCP6Q96RT7 1819 aa15.89■□□□□ 0.13
SSH2-208ENST00000579040 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
SSH2-208ENST00000579040 POLKQ9UBT6 870 aa15.88■□□□□ 0.13
SSH2-208ENST00000579040 ZBTB7AO95365 584 aa15.87■□□□□ 0.13
SSH2-208ENST00000579040 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
SSH2-208ENST00000579040 PANK3Q9H999 370 aa15.87■□□□□ 0.13
SSH2-208ENST00000579040 TOGARAM1Q9Y4F4 1720 aa15.87■□□□□ 0.13
SSH2-208ENST00000579040 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
SSH2-208ENST00000579040 COL24A1Q17RW2 1714 aa15.85■□□□□ 0.13
SSH2-208ENST00000579040 TAF1LQ8IZX4 1826 aa15.85■□□□□ 0.13
SSH2-208ENST00000579040 PTGER2P43116 358 aa15.85■□□□□ 0.13
SSH2-208ENST00000579040 ZNF827Q17R98 1081 aa15.85■□□□□ 0.13
SSH2-208ENST00000579040 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
SSH2-208ENST00000579040 C5P01031 1676 aa15.84■□□□□ 0.13
SSH2-208ENST00000579040 CYP27B1O15528 508 aa15.84■□□□□ 0.13
SSH2-208ENST00000579040 HMGB2P26583 209 aaKnown RBP15.84■□□□□ 0.13
SSH2-208ENST00000579040 EYA1Q99502 592 aa15.84■□□□□ 0.13
SSH2-208ENST00000579040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.84■□□□□ 0.134e-6■■■■■ 27.4
SSH2-208ENST00000579040 SPG7Q9UQ90 795 aa15.84■□□□□ 0.13
SSH2-208ENST00000579040 TNNT2P45379 298 aaPredicted RBP15.83■□□□□ 0.12
SSH2-208ENST00000579040 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
SSH2-208ENST00000579040 EIF4A2Q14240 407 aaKnown RBP15.82■□□□□ 0.12
SSH2-208ENST00000579040 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
SSH2-208ENST00000579040 SLC16A10Q8TF71 515 aa15.82■□□□□ 0.12
SSH2-208ENST00000579040 SGIP1Q9BQI5 828 aa15.82■□□□□ 0.12
SSH2-208ENST00000579040 CCNL1Q9UK58 526 aaPredicted RBP15.82■□□□□ 0.12
SSH2-208ENST00000579040 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
SSH2-208ENST00000579040 KNSTRNQ9Y448 316 aa15.81■□□□□ 0.12
SSH2-208ENST00000579040 PNPLA7Q6ZV29 1317 aa15.8■□□□□ 0.12
SSH2-208ENST00000579040 IGSF1Q8N6C5 1336 aa15.8■□□□□ 0.12
SSH2-208ENST00000579040 MORC1Q86VD1 984 aa15.8■□□□□ 0.12
SSH2-208ENST00000579040 TFCP2L1Q9NZI6 479 aa15.8■□□□□ 0.12
SSH2-208ENST00000579040 PALLDQ8WX93 1383 aa15.79■□□□□ 0.12
SSH2-208ENST00000579040 KIF7Q2M1P5 1343 aa15.79■□□□□ 0.12
SSH2-208ENST00000579040 KCNQ4P56696 695 aa15.79■□□□□ 0.12
SSH2-208ENST00000579040 SMARCC1Q92922 1105 aaPredicted RBP15.79■□□□□ 0.12
SSH2-208ENST00000579040 MAP3K5Q99683 1374 aa15.78■□□□□ 0.12
SSH2-208ENST00000579040 MPRIPQ6WCQ1 1025 aa15.78■□□□□ 0.12
SSH2-208ENST00000579040 IFNL2Q8IZJ0 200 aa15.77■□□□□ 0.12
SSH2-208ENST00000579040 ARXQ96QS3 562 aa15.77■□□□□ 0.12
SSH2-208ENST00000579040 C4BP0C0L5 1744 aa15.77■□□□□ 0.11
SSH2-208ENST00000579040 PHKG2P15735 406 aa15.76■□□□□ 0.11
SSH2-208ENST00000579040 AMER1Q5JTC6 1135 aaPredicted RBP15.76■□□□□ 0.11
SSH2-208ENST00000579040 FHDC1Q9C0D6 1143 aaPredicted RBP15.76■□□□□ 0.11
SSH2-208ENST00000579040 PIGBQ92521 554 aa15.75■□□□□ 0.11
SSH2-208ENST00000579040 SYT17Q9BSW7 474 aa15.75■□□□□ 0.11
SSH2-208ENST00000579040 UBR3Q6ZT12 1888 aa15.75■□□□□ 0.11
SSH2-208ENST00000579040 POLD1P28340 1107 aa15.74■□□□□ 0.11
SSH2-208ENST00000579040 TMOD3Q9NYL9 352 aa15.74■□□□□ 0.11
SSH2-208ENST00000579040 CHD4Q14839 1912 aa15.74■□□□□ 0.11
SSH2-208ENST00000579040 PLEKHO1Q53GL0 409 aaPredicted RBP15.73■□□□□ 0.11
SSH2-208ENST00000579040 FLAD1Q8NFF5 587 aa15.73■□□□□ 0.11
SSH2-208ENST00000579040 ZNF831Q5JPB2 1677 aa15.73■□□□□ 0.11
SSH2-208ENST00000579040 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
SSH2-208ENST00000579040 AMOTQ4VCS5 1084 aa15.72■□□□□ 0.11
SSH2-208ENST00000579040 KDRP35968 1356 aa15.72■□□□□ 0.11
SSH2-208ENST00000579040 COL23A1Q86Y22 540 aaPredicted RBP15.71■□□□□ 0.11
SSH2-208ENST00000579040 DCAF5Q96JK2 942 aa15.71■□□□□ 0.11
SSH2-208ENST00000579040 LOC102724428A0A0B4J2F2 783 aa15.7■□□□□ 0.1
SSH2-208ENST00000579040 ERVV-2B6SEH9 535 aa15.7■□□□□ 0.1
SSH2-208ENST00000579040 PER1O15534 1290 aaPredicted RBP15.7■□□□□ 0.1
SSH2-208ENST00000579040 YY1P25490 414 aa15.7■□□□□ 0.1
SSH2-208ENST00000579040 SIK1P57059 783 aa15.7■□□□□ 0.1
SSH2-208ENST00000579040 NPC1L1Q9UHC9 1359 aa15.7■□□□□ 0.1
SSH2-208ENST00000579040 SCN11AQ9UI33 1791 aa15.7■□□□□ 0.1
SSH2-208ENST00000579040 VIRMAQ69YN4 1812 aaKnown RBP15.69■□□□□ 0.1
SSH2-208ENST00000579040 MSH5O43196 834 aa15.69■□□□□ 0.1
SSH2-208ENST00000579040 IL13P35225 146 aa15.69■□□□□ 0.1
SSH2-208ENST00000579040 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
SSH2-208ENST00000579040 AK7Q96M32 723 aa15.69■□□□□ 0.1
SSH2-208ENST00000579040 AEBP1Q8IUX7 1158 aa15.68■□□□□ 0.1
SSH2-208ENST00000579040 ASAP1Q9ULH1 1129 aa15.68■□□□□ 0.1
SSH2-208ENST00000579040 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
SSH2-208ENST00000579040 C1orf141Q5JVX7 400 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms