RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 FBXO22Q8NEZ5 403 aa6.97□□□□□ -1.29
GAPLINC-202ENST00000579007 PMFBP1Q8TBY8 1022 aa6.97□□□□□ -1.29
GAPLINC-202ENST00000579007 CCDC102AQ96A19 550 aa6.97□□□□□ -1.29
GAPLINC-202ENST00000579007 CRISPLD2Q9H0B8 497 aa6.97□□□□□ -1.29
GAPLINC-202ENST00000579007 TRAK1Q9UPV9 953 aa6.97□□□□□ -1.29
GAPLINC-202ENST00000579007 SLIT3O75094 1523 aa6.96□□□□□ -1.29
GAPLINC-202ENST00000579007 LTN1O94822 1766 aa6.96□□□□□ -1.3
GAPLINC-202ENST00000579007 VPS72Q15906 364 aa6.96□□□□□ -1.3
GAPLINC-202ENST00000579007 USP35Q9P2H5 1018 aa6.96□□□□□ -1.3
GAPLINC-202ENST00000579007 CAMTA1Q9Y6Y1 1673 aa6.96□□□□□ -1.3
GAPLINC-202ENST00000579007 POLR3AO14802 1390 aaPredicted RBP6.95□□□□□ -1.3
GAPLINC-202ENST00000579007 DISP2A7MBM2 1401 aa6.95□□□□□ -1.3
GAPLINC-202ENST00000579007 IRF6O14896 467 aa6.95□□□□□ -1.3
GAPLINC-202ENST00000579007 DSG3P32926 999 aa6.95□□□□□ -1.3
GAPLINC-202ENST00000579007 CREBZFQ9NS37 354 aa6.95□□□□□ -1.3
GAPLINC-202ENST00000579007 FAM83GA6ND36 823 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 WASLO00401 505 aaPredicted RBP6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 SOX12O15370 315 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 BRD1O95696 1058 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 SH3D19Q5HYK7 790 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 DEFB132Q7Z7B7 95 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 SEPT12Q8IYM1 358 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 DCAF11Q8TEB1 546 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 POGKQ9P215 609 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 CASZ1Q86V15 1759 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 KIAA0232Q92628 1395 aa6.94□□□□□ -1.3
GAPLINC-202ENST00000579007 NFAT5O94916 1531 aa6.93□□□□□ -1.3
GAPLINC-202ENST00000579007 SPDYE16A6NNV3 312 aaPredicted RBP6.93□□□□□ -1.3
GAPLINC-202ENST00000579007 PSME1Q06323 249 aa6.93□□□□□ -1.3
GAPLINC-202ENST00000579007 POM121Q96HA1 1249 aa6.93□□□□□ -1.3
GAPLINC-202ENST00000579007 GPRASP1Q5JY77 1395 aa6.93□□□□□ -1.3
GAPLINC-202ENST00000579007 PPIP5K1Q6PFW1 1433 aa6.93□□□□□ -1.3
GAPLINC-202ENST00000579007 SSH2Q76I76 1423 aa6.93□□□□□ -1.3
GAPLINC-202ENST00000579007 COL5A2P05997 1499 aaPredicted RBP6.92□□□□□ -1.3
GAPLINC-202ENST00000579007 CHMP4AQ9BY43 222 aa6.92□□□□□ -1.3
GAPLINC-202ENST00000579007 BTG4Q9NY30 223 aa6.92□□□□□ -1.3
GAPLINC-202ENST00000579007 USP19O94966 1318 aa6.92□□□□□ -1.3
GAPLINC-202ENST00000579007 SPATA31A5Q5VU36 1347 aa6.92□□□□□ -1.3
GAPLINC-202ENST00000579007 SPATA31A7Q8IWB4 1347 aa6.92□□□□□ -1.3
GAPLINC-202ENST00000579007 SHANK3Q9BYB0 1731 aa6.91□□□□□ -1.3
GAPLINC-202ENST00000579007 SPDYE5A6NIY4 337 aa6.91□□□□□ -1.3
GAPLINC-202ENST00000579007 PSEN1P49768 467 aa6.91□□□□□ -1.3
GAPLINC-202ENST00000579007 FAM98CQ17RN3 349 aaKnown RBP6.91□□□□□ -1.3
GAPLINC-202ENST00000579007 USP6P35125 1406 aa6.91□□□□□ -1.3
GAPLINC-202ENST00000579007 NHSQ6T4R5 1651 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 TUBGCP6Q96RT7 1819 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 UTRNP46939 3433 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 CCDC27Q2M243 656 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 NBPF1Q3BBV0 1214 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 FAM182BQ5T319 152 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 KRT27Q7Z3Y8 459 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 CCDC125Q86Z20 511 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 NUDT16Q96DE0 195 aaKnown RBP6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 COG6Q9Y2V7 657 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 ZNF330Q9Y3S2 320 aaPredicted RBP6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 SPATA31A1Q5TZJ5 1347 aa6.9□□□□□ -1.3
GAPLINC-202ENST00000579007 CPDO75976 1380 aa6.9□□□□□ -1.31
GAPLINC-202ENST00000579007 ABCC6O95255 1503 aa6.9□□□□□ -1.31
GAPLINC-202ENST00000579007 RGPD2P0DJD1 1756 aa6.9□□□□□ -1.31
GAPLINC-202ENST00000579007 CHRNA2Q15822 529 aa6.89□□□□□ -1.31
GAPLINC-202ENST00000579007 NGDNQ8NEJ9 315 aaKnown RBP6.89□□□□□ -1.31
GAPLINC-202ENST00000579007 ZRANB1Q9UGI0 708 aa6.89□□□□□ -1.31
GAPLINC-202ENST00000579007 ACEP12821 1306 aa6.89□□□□□ -1.31
GAPLINC-202ENST00000579007 PAPPAQ13219 1627 aa6.89□□□□□ -1.31
GAPLINC-202ENST00000579007 FAM208AQ9UK61 1670 aaKnown RBP6.89□□□□□ -1.31
GAPLINC-202ENST00000579007 BTAF1O14981 1849 aa6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 MYOM1P52179 1685 aa6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 CD163L1Q9NR16 1453 aa6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 CPSF1Q10570 1443 aaKnown RBP6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 PAK3O75914 559 aaPredicted RBP6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 TTLL12Q14166 644 aaPredicted RBP6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 PDIA6Q15084 440 aa6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 SKIV2LQ15477 1246 aaKnown RBP6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 NUTM2GQ5VZR2 741 aa6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 CDK19Q9BWU1 502 aa6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 PRDM11Q9NQV5 511 aa6.88□□□□□ -1.31
GAPLINC-202ENST00000579007 DOT1LQ8TEK3 1739 aa6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 GOLGB1Q14789 3259 aaKnown RBP6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 CENPJQ9HC77 1338 aaPredicted RBP6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 A0A0G2JS52 829 aa6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 PSDA5PKW4 1024 aaPredicted RBP6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 MS4A1P11836 297 aa6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 GIGYF2Q6Y7W6 1299 aaKnown RBP6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 OXER1Q8TDS5 423 aa6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 STAC3Q96MF2 364 aa6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 IGSF5Q9NSI5 407 aa6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 KIF20BQ96Q89 1820 aa6.87□□□□□ -1.31
GAPLINC-202ENST00000579007 CRB1P82279 1406 aa6.86□□□□□ -1.31
GAPLINC-202ENST00000579007 GNPATO15228 680 aa6.86□□□□□ -1.31
GAPLINC-202ENST00000579007 CANXP27824 592 aaKnown RBP6.86□□□□□ -1.31
GAPLINC-202ENST00000579007 ZC3H6P61129 1189 aaKnown RBP6.86□□□□□ -1.31
GAPLINC-202ENST00000579007 EFCAB3Q8N7B9 438 aa6.86□□□□□ -1.31
GAPLINC-202ENST00000579007 ZNF579Q8NAF0 562 aaKnown RBP6.86□□□□□ -1.31
GAPLINC-202ENST00000579007 SPDYE1Q8NFV5 336 aaPredicted RBP6.86□□□□□ -1.31
GAPLINC-202ENST00000579007 STRN4Q9NRL3 753 aa6.86□□□□□ -1.31
GAPLINC-202ENST00000579007 QSER1Q2KHR3 1735 aa6.86□□□□□ -1.31
GAPLINC-202ENST00000579007 BAG6P46379 1132 aa6.85□□□□□ -1.31
GAPLINC-202ENST00000579007 EN1Q05925 392 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms