RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 NBPF4Q96M43 638 aa12.77□□□□□ -0.37
CDK5RAP3-211ENST00000578996 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-211ENST00000578996 HSP90AB2PQ58FF8 381 aa12.76□□□□□ -0.37
CDK5RAP3-211ENST00000578996 FLT4P35916 1363 aa12.76□□□□□ -0.37
CDK5RAP3-211ENST00000578996 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
CDK5RAP3-211ENST00000578996 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-211ENST00000578996 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
CDK5RAP3-211ENST00000578996 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
CDK5RAP3-211ENST00000578996 INSRP06213 1382 aa12.74□□□□□ -0.37
CDK5RAP3-211ENST00000578996 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
CDK5RAP3-211ENST00000578996 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
CDK5RAP3-211ENST00000578996 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 KCNQ4P56696 695 aa12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 EIF4G2P78344 907 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 HSPA5P11021 654 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PTGER2P43116 358 aa12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 SLC27A3Q5K4L6 730 aa12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 KAT6BQ8WYB5 2073 aa12.71□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PCDH11YQ9BZA8 1340 aa12.71□□□□□ -0.37
CDK5RAP3-211ENST00000578996 NSD2O96028 1365 aa12.7□□□□□ -0.38
CDK5RAP3-211ENST00000578996 TFCP2L1Q9NZI6 479 aa12.7□□□□□ -0.38
CDK5RAP3-211ENST00000578996 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-211ENST00000578996 YY1P25490 414 aa12.69□□□□□ -0.38
CDK5RAP3-211ENST00000578996 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
CDK5RAP3-211ENST00000578996 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
CDK5RAP3-211ENST00000578996 FHDC1Q9C0D6 1143 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-211ENST00000578996 MSH5O43196 834 aa12.68□□□□□ -0.38
CDK5RAP3-211ENST00000578996 MPRIPQ6WCQ1 1025 aa12.68□□□□□ -0.38
CDK5RAP3-211ENST00000578996 PNPLA7Q6ZV29 1317 aa12.67□□□□□ -0.38
CDK5RAP3-211ENST00000578996 ARXQ96QS3 562 aa12.67□□□□□ -0.38
CDK5RAP3-211ENST00000578996 PANK3Q9H999 370 aa12.67□□□□□ -0.38
CDK5RAP3-211ENST00000578996 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 CYP27B1O15528 508 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 SGIP1Q9BQI5 828 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 SYT17Q9BSW7 474 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 POLKQ9UBT6 870 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 LY75O60449 1722 aa12.65□□□□□ -0.38
CDK5RAP3-211ENST00000578996 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
CDK5RAP3-211ENST00000578996 POLD1P28340 1107 aa12.65□□□□□ -0.38
CDK5RAP3-211ENST00000578996 EYA1Q99502 592 aa12.65□□□□□ -0.38
CDK5RAP3-211ENST00000578996 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PALLDQ8WX93 1383 aa12.64□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PKD1L3Q7Z443 1732 aa12.63□□□□□ -0.39
CDK5RAP3-211ENST00000578996 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-211ENST00000578996 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-211ENST00000578996 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 TUBGCP6Q96RT7 1819 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 MSL1Q68DK7 614 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 COL23A1Q86Y22 540 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 IFNL2Q8IZJ0 200 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 C5P01031 1676 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PHKG2P15735 406 aa12.6□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PIGBQ92521 554 aa12.6□□□□□ -0.39
CDK5RAP3-211ENST00000578996 AK7Q96M32 723 aa12.6□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PHF14O94880 888 aa12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 GPR162Q16538 588 aa12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.393e-14■□□□□ 10.7
CDK5RAP3-211ENST00000578996 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 UTRNP46939 3433 aa12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 ITGB4P16144 1822 aa12.58□□□□□ -0.4
CDK5RAP3-211ENST00000578996 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-211ENST00000578996 MAP3K5Q99683 1374 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 SIK1P57059 783 aa12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 PLEKHO1Q53GL0 409 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 NLGN2Q8NFZ4 835 aa12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ATP6V1AP38606 617 aa12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 CNGB1Q14028 1251 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ZNF530Q6P9A1 599 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 AEBP1Q8IUX7 1158 aa12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 LINC00116Q8NCU8 138 aa12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 TAF1LQ8IZX4 1826 aa12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 891 ms