RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 FUT2Q10981 343 aa5.9□□□□□ -1.46
SMARCE1-215ENST00000578995 PPARGC1BQ86YN6 1023 aaKnown RBP5.9□□□□□ -1.46
SMARCE1-215ENST00000578995 AFAP1Q8N556 730 aa5.9□□□□□ -1.46
SMARCE1-215ENST00000578995 A2MP01023 1474 aa5.9□□□□□ -1.47
SMARCE1-215ENST00000578995 CAMSAP1Q5T5Y3 1602 aa5.89□□□□□ -1.47
SMARCE1-215ENST00000578995 IQGAP3Q86VI3 1631 aa5.89□□□□□ -1.47
SMARCE1-215ENST00000578995 SCARF1Q14162 830 aa5.89□□□□□ -1.47
SMARCE1-215ENST00000578995 FAM161AQ3B820 660 aa5.89□□□□□ -1.47
SMARCE1-215ENST00000578995 KRTAP1-3Q8IUG1 177 aa5.89□□□□□ -1.47
SMARCE1-215ENST00000578995 NCOA1Q15788 1441 aa5.89□□□□□ -1.47
SMARCE1-215ENST00000578995 KDM5DQ9BY66 1539 aa5.89□□□□□ -1.47
SMARCE1-215ENST00000578995 FAM135AQ9P2D6 1515 aa5.89□□□□□ -1.47
SMARCE1-215ENST00000578995 RDH13Q8NBN7 331 aa5.88□□□□□ -1.47
SMARCE1-215ENST00000578995 ZNF777Q9ULD5 760 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-215ENST00000578995 ROCK1Q13464 1354 aa5.88□□□□□ -1.47
SMARCE1-215ENST00000578995 E9PCH4 1651 aa5.88□□□□□ -1.47
SMARCE1-215ENST00000578995 CFAP65Q6ZU64 1925 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-215ENST00000578995 OATP04181 439 aa5.87□□□□□ -1.47
SMARCE1-215ENST00000578995 RNF19BQ6ZMZ0 732 aa5.87□□□□□ -1.47
SMARCE1-215ENST00000578995 ERBINQ96RT1 1412 aa5.87□□□□□ -1.47
SMARCE1-215ENST00000578995 TET3O43151 1660 aa5.87□□□□□ -1.47
SMARCE1-215ENST00000578995 PREX1Q8TCU6 1659 aa5.87□□□□□ -1.47
SMARCE1-215ENST00000578995 MYO5BQ9ULV0 1848 aa5.86□□□□□ -1.47
SMARCE1-215ENST00000578995 ZNF142P52746 1687 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-215ENST00000578995 ABCC3O15438 1527 aa5.86□□□□□ -1.47
SMARCE1-215ENST00000578995 NAIPQ13075 1403 aa5.86□□□□□ -1.47
SMARCE1-215ENST00000578995 DHX29Q7Z478 1369 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-215ENST00000578995 SPAG9O60271 1321 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-215ENST00000578995 MRPL14Q6P1L8 145 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-215ENST00000578995 PXYLP1Q8TE99 480 aa5.86□□□□□ -1.47
SMARCE1-215ENST00000578995 LMTK2Q8IWU2 1503 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 HFM1A2PYH4 1435 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 KIF15Q9NS87 1388 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 SOBPA7XYQ1 873 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 MSTNO14793 375 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 SIAH2O43255 324 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 PPFIA3O75145 1194 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 Q3C1V9 767 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 GRIPAP1Q4V328 841 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 CCDC24Q8N4L8 307 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 EHBP1Q8NDI1 1231 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 WDR70Q9NW82 654 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 SPHKAPQ2M3C7 1700 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 PIK3C2BO00750 1634 aa5.85□□□□□ -1.47
SMARCE1-215ENST00000578995 EFCAB6Q5THR3 1501 aa5.84□□□□□ -1.47
SMARCE1-215ENST00000578995 SETD1BQ9UPS6 1966 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-215ENST00000578995 MARSP56192 900 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-215ENST00000578995 SVOPQ8N4V2 548 aa5.84□□□□□ -1.47
SMARCE1-215ENST00000578995 SCARF2Q96GP6 870 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-215ENST00000578995 CNTNAP3BQ96NU0 1288 aa5.84□□□□□ -1.47
SMARCE1-215ENST00000578995 PURBQ96QR8 312 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-215ENST00000578995 CNTNAP3Q9BZ76 1288 aa5.84□□□□□ -1.47
SMARCE1-215ENST00000578995 MYO3AQ8NEV4 1616 aa5.84□□□□□ -1.47
SMARCE1-215ENST00000578995 DXOO77932 396 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-215ENST00000578995 ZNF385CQ66K41 422 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-215ENST00000578995 SYNMO15061 1565 aa5.83□□□□□ -1.48
SMARCE1-215ENST00000578995 SPATA31D1Q6ZQQ2 1576 aa5.83□□□□□ -1.48
SMARCE1-215ENST00000578995 PTPRMP28827 1452 aa5.83□□□□□ -1.48
SMARCE1-215ENST00000578995 ANKRD50Q9ULJ7 1429 aa5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 ANKRD30AQ9BXX3 1397 aa5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 KDM5AP29375 1690 aaKnown RBP5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 MAN1A2O60476 641 aa5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 GCGRP47871 477 aa5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 KRT76Q01546 638 aa5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 FAM50AQ14320 339 aaKnown RBP5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 Q8N3U1 123 aa5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 DAXXQ9UER7 740 aaPredicted RBP5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 PZPP20742 1482 aa5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 UBR1Q8IWV7 1749 aa5.82□□□□□ -1.48
SMARCE1-215ENST00000578995 IFT172Q9UG01 1749 aa5.81□□□□□ -1.48
SMARCE1-215ENST00000578995 STRCQ7RTU9 1775 aa5.8□□□□□ -1.48
SMARCE1-215ENST00000578995 POLR1AO95602 1720 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1-215ENST00000578995 DDX11L8A8MPP1 907 aa5.8□□□□□ -1.48
SMARCE1-215ENST00000578995 METTL3Q86U44 580 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-215ENST00000578995 USB1Q9BQ65 265 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-215ENST00000578995 ARHGAP31Q2M1Z3 1444 aa5.8□□□□□ -1.48
SMARCE1-215ENST00000578995 CLTCL1P53675 1640 aa5.79□□□□□ -1.48
SMARCE1-215ENST00000578995 TSPY4P0CV99 314 aa5.79□□□□□ -1.48
SMARCE1-215ENST00000578995 TSPY10P0CW01 314 aa5.79□□□□□ -1.48
SMARCE1-215ENST00000578995 CHIC2Q9UKJ5 165 aa5.79□□□□□ -1.48
SMARCE1-215ENST00000578995 NPATQ14207 1427 aa5.79□□□□□ -1.48
SMARCE1-215ENST00000578995 CNTLNQ9NXG0 1405 aa5.79□□□□□ -1.48
SMARCE1-215ENST00000578995 KIF1BO60333 1816 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 ERVK-7P63135 1459 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 LMTK3Q96Q04 1460 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 TMEM131LA2VDJ0 1609 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 NUTM2FA1L443 756 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 FCHSD2O94868 740 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 ARHGEF15O94989 841 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 NOS1P29475 1434 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 PLA2G4EQ3MJ16 856 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 SULF1Q8IWU6 871 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 SPOCK3Q9BQ16 436 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 RRP7BPQ9NSQ0 103 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 CEP170BQ9Y4F5 1589 aaPredicted RBP5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 TRPM2O94759 1503 aa5.78□□□□□ -1.48
SMARCE1-215ENST00000578995 RPRD2Q5VT52 1461 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-215ENST00000578995 UGGT1Q9NYU2 1555 aa5.77□□□□□ -1.49
SMARCE1-215ENST00000578995 PLEKHG3A1L390 1219 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms