RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 SHANK3Q9BYB0 1731 aa20.67■□□□□ 0.9
IFT20-208ENST00000578985 SULT6B1Q6IMI4 303 aa20.67■□□□□ 0.9
IFT20-208ENST00000578985 DDX54Q8TDD1 881 aaKnown RBP20.67■□□□□ 0.9
IFT20-208ENST00000578985 MYBBP1AQ9BQG0 1328 aaKnown RBP20.67■□□□□ 0.9
IFT20-208ENST00000578985 U2SURPO15042 1029 aaKnown RBP20.66■□□□□ 0.9
IFT20-208ENST00000578985 AEBP1Q8IUX7 1158 aa20.66■□□□□ 0.9
IFT20-208ENST00000578985 KAT6BQ8WYB5 2073 aa20.66■□□□□ 0.9
IFT20-208ENST00000578985 PKD1L3Q7Z443 1732 aa20.65■□□□□ 0.9
IFT20-208ENST00000578985 NUDCQ9Y266 331 aa20.65■□□□□ 0.9
IFT20-208ENST00000578985 SBF2Q86WG5 1849 aa20.64■□□□□ 0.9
IFT20-208ENST00000578985 KDRP35968 1356 aa20.64■□□□□ 0.89
IFT20-208ENST00000578985 HMOX1P09601 288 aa20.63■□□□□ 0.89
IFT20-208ENST00000578985 SPG7Q9UQ90 795 aa20.63■□□□□ 0.89
IFT20-208ENST00000578985 CCDC125Q86Z20 511 aa20.62■□□□□ 0.89
IFT20-208ENST00000578985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.62■□□□□ 0.89
IFT20-208ENST00000578985 BCL9O00512 1426 aa20.61■□□□□ 0.89
IFT20-208ENST00000578985 PLEKHG2Q9H7P9 1386 aa20.61■□□□□ 0.89
IFT20-208ENST00000578985 PCDH11XQ9BZA7 1347 aa20.61■□□□□ 0.89
IFT20-208ENST00000578985 PCDH11YQ9BZA8 1340 aa20.61■□□□□ 0.89
IFT20-208ENST00000578985 ANP32CO43423 234 aa20.6■□□□□ 0.89
IFT20-208ENST00000578985 TRIM37O94972 964 aa20.6■□□□□ 0.89
IFT20-208ENST00000578985 PLEKHO1Q53GL0 409 aaPredicted RBP20.6■□□□□ 0.89
IFT20-208ENST00000578985 U2AF1L5P0DN76 240 aaPredicted RBP20.59■□□□□ 0.89
IFT20-208ENST00000578985 U2AF1Q01081 240 aaKnown RBP eCLIP20.59■□□□□ 0.89
IFT20-208ENST00000578985 SF3B2Q13435 895 aaKnown RBP20.59■□□□□ 0.89
IFT20-208ENST00000578985 CYP27B1O15528 508 aa20.58■□□□□ 0.89
IFT20-208ENST00000578985 AMOTQ4VCS5 1084 aa20.58■□□□□ 0.89
IFT20-208ENST00000578985 TNS1Q9HBL0 1735 aaKnown RBP20.58■□□□□ 0.88
IFT20-208ENST00000578985 ACSBG1Q96GR2 724 aa20.56■□□□□ 0.88
IFT20-208ENST00000578985 ZNF530Q6P9A1 599 aaPredicted RBP20.55■□□□□ 0.88
IFT20-208ENST00000578985 IFNL2Q8IZJ0 200 aa20.55■□□□□ 0.88
IFT20-208ENST00000578985 DOT1LQ8TEK3 1739 aa20.55■□□□□ 0.88
IFT20-208ENST00000578985 NHSQ6T4R5 1651 aa20.54■□□□□ 0.88
IFT20-208ENST00000578985 PHKG2P15735 406 aa20.54■□□□□ 0.88
IFT20-208ENST00000578985 BCL11BQ9C0K0 894 aaPredicted RBP20.54■□□□□ 0.88
IFT20-208ENST00000578985 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
IFT20-208ENST00000578985 KCNQ2O43526 872 aa20.53■□□□□ 0.88
IFT20-208ENST00000578985 FCHSD2O94868 740 aa20.53■□□□□ 0.88
IFT20-208ENST00000578985 PRKAR2BP31323 418 aa20.53■□□□□ 0.88
IFT20-208ENST00000578985 NKX1-1Q15270 411 aaPredicted RBP20.53■□□□□ 0.88
IFT20-208ENST00000578985 PTF1AQ7RTS3 328 aa20.53■□□□□ 0.88
IFT20-208ENST00000578985 APBA3O96018 575 aa20.52■□□□□ 0.88
IFT20-208ENST00000578985 BAG6P46379 1132 aa20.52■□□□□ 0.88
IFT20-208ENST00000578985 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
IFT20-208ENST00000578985 C1orf141Q5JVX7 400 aa20.51■□□□□ 0.87
IFT20-208ENST00000578985 DEFB132Q7Z7B7 95 aa20.51■□□□□ 0.87
IFT20-208ENST00000578985 HSP90AB1P08238 724 aaKnown RBP20.5■□□□□ 0.87
IFT20-208ENST00000578985 BTAF1O14981 1849 aa20.5■□□□□ 0.87
IFT20-208ENST00000578985 ITGB4P16144 1822 aa20.5■□□□□ 0.87
IFT20-208ENST00000578985 TOGARAM1Q9Y4F4 1720 aa20.5■□□□□ 0.87
IFT20-208ENST00000578985 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
IFT20-208ENST00000578985 SYTL4Q96C24 671 aaPredicted RBP20.49■□□□□ 0.87
IFT20-208ENST00000578985 PHACTR3Q96KR7 559 aa20.48■□□□□ 0.87
IFT20-208ENST00000578985 EN1Q05925 392 aaPredicted RBP20.47■□□□□ 0.87
IFT20-208ENST00000578985 WDR43Q15061 677 aaKnown RBP eCLIP20.47■□□□□ 0.87
IFT20-208ENST00000578985 AKAP4Q5JQC9 854 aa20.47■□□□□ 0.87
IFT20-208ENST00000578985 PNNQ9H307 717 aaKnown RBP20.47■□□□□ 0.87
IFT20-208ENST00000578985 EP400Q96L91 3159 aa20.46■□□□□ 0.87
IFT20-208ENST00000578985 CCDC184Q52MB2 194 aa20.46■□□□□ 0.87
IFT20-208ENST00000578985 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
IFT20-208ENST00000578985 DCAF5Q96JK2 942 aa20.46■□□□□ 0.87
IFT20-208ENST00000578985 VIRMAQ69YN4 1812 aaKnown RBP20.46■□□□□ 0.87
IFT20-208ENST00000578985 SCN11AQ9UI33 1791 aa20.45■□□□□ 0.86
IFT20-208ENST00000578985 NEFMP07197 916 aa20.45■□□□□ 0.86
IFT20-208ENST00000578985 MPRIPQ6WCQ1 1025 aa20.45■□□□□ 0.86
IFT20-208ENST00000578985 PLSCR1O15162 318 aa20.44■□□□□ 0.86
IFT20-208ENST00000578985 CAMKK2Q96RR4 588 aa20.44■□□□□ 0.86
IFT20-208ENST00000578985 RGPD3A6NKT7 1758 aaPredicted RBP20.44■□□□□ 0.86
IFT20-208ENST00000578985 RGPD4Q7Z3J3 1758 aa20.44■□□□□ 0.86
IFT20-208ENST00000578985 KDM6AO15550 1401 aaPredicted RBP20.44■□□□□ 0.86
IFT20-208ENST00000578985 EZH2Q15910 746 aaKnown RBP20.43■□□□□ 0.86
IFT20-208ENST00000578985 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
IFT20-208ENST00000578985 ERVV-2B6SEH9 535 aa20.42■□□□□ 0.86
IFT20-208ENST00000578985 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
IFT20-208ENST00000578985 PIGBQ92521 554 aa20.41■□□□□ 0.86
IFT20-208ENST00000578985 TMOD3Q9NYL9 352 aa20.41■□□□□ 0.86
IFT20-208ENST00000578985 ADAMTS8Q9UP79 889 aa20.41■□□□□ 0.86
IFT20-208ENST00000578985 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
IFT20-208ENST00000578985 MAP3K5Q99683 1374 aa20.41■□□□□ 0.86
IFT20-208ENST00000578985 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
IFT20-208ENST00000578985 RNMTO43148 476 aaKnown RBP20.4■□□□□ 0.86
IFT20-208ENST00000578985 CABP4P57796 275 aa20.4■□□□□ 0.86
IFT20-208ENST00000578985 LGR6Q9HBX8 967 aa20.4■□□□□ 0.86
IFT20-208ENST00000578985 DLG5Q8TDM6 1919 aa20.39■□□□□ 0.86
IFT20-208ENST00000578985 RREB1Q92766 1687 aa20.39■□□□□ 0.86
IFT20-208ENST00000578985 ADAMTS7Q9UKP4 1686 aa20.39■□□□□ 0.86
IFT20-208ENST00000578985 DIEXFQ68CQ4 756 aaKnown RBP20.39■□□□□ 0.85
IFT20-208ENST00000578985 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
IFT20-208ENST00000578985 RUNDC1Q96C34 613 aa20.37■□□□□ 0.85
IFT20-208ENST00000578985 LY75O60449 1722 aa20.36■□□□□ 0.85
IFT20-208ENST00000578985 NFE2L2Q16236 605 aa20.36■□□□□ 0.85
IFT20-208ENST00000578985 TXNRD1Q16881 649 aa20.36■□□□□ 0.85
IFT20-208ENST00000578985 PROM2Q8N271 834 aa20.36■□□□□ 0.85
IFT20-208ENST00000578985 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
IFT20-208ENST00000578985 PNISRQ8TF01 805 aaKnown RBP20.36■□□□□ 0.85
IFT20-208ENST00000578985 SMARCC1Q92922 1105 aaPredicted RBP20.36■□□□□ 0.85
IFT20-208ENST00000578985 NUP188Q5SRE5 1749 aa20.36■□□□□ 0.85
IFT20-208ENST00000578985 NFATC2IPQ8NCF5 419 aa20.35■□□□□ 0.85
IFT20-208ENST00000578985 RTF1Q92541 710 aaKnown RBP20.35■□□□□ 0.85
IFT20-208ENST00000578985 SLC52A2Q9HAB3 445 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms