RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 TXNRD1Q16881 649 aa8.83□□□□□ -1
TRAF4-213ENST00000578917 SULT6B1Q6IMI4 303 aa8.83□□□□□ -1
TRAF4-213ENST00000578917 MPRIPQ6WCQ1 1025 aa8.83□□□□□ -1
TRAF4-213ENST00000578917 U2SURPO15042 1029 aaKnown RBP8.82□□□□□ -1
TRAF4-213ENST00000578917 DDX10Q13206 875 aaKnown RBP8.82□□□□□ -1
TRAF4-213ENST00000578917 IFNL2Q8IZJ0 200 aa8.82□□□□□ -1
TRAF4-213ENST00000578917 STK32BQ9NY57 414 aa8.82□□□□□ -1
TRAF4-213ENST00000578917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.82□□□□□ -13e-6■□□□□ 10.9
TRAF4-213ENST00000578917 MYOM1P52179 1685 aa8.81□□□□□ -1
TRAF4-213ENST00000578917 USP54Q70EL1 1684 aa8.81□□□□□ -1
TRAF4-213ENST00000578917 LTN1O94822 1766 aa8.81□□□□□ -1
TRAF4-213ENST00000578917 CYP27B1O15528 508 aa8.81□□□□□ -1
TRAF4-213ENST00000578917 HMOX1P09601 288 aa8.81□□□□□ -1
TRAF4-213ENST00000578917 AMOTQ4VCS5 1084 aa8.81□□□□□ -1
TRAF4-213ENST00000578917 C1orf141Q5JVX7 400 aa8.81□□□□□ -1
TRAF4-213ENST00000578917 NUDCQ9Y266 331 aa8.81□□□□□ -1
TRAF4-213ENST00000578917 BCL9O00512 1426 aa8.8□□□□□ -1
TRAF4-213ENST00000578917 IL13P35225 146 aa8.8□□□□□ -1
TRAF4-213ENST00000578917 ZNF530Q6P9A1 599 aaPredicted RBP8.8□□□□□ -1
TRAF4-213ENST00000578917 AEBP1Q8IUX7 1158 aa8.8□□□□□ -1
TRAF4-213ENST00000578917 PROM2Q8N271 834 aa8.8□□□□□ -1
TRAF4-213ENST00000578917 RGPD5Q99666 1765 aa8.8□□□□□ -1
TRAF4-213ENST00000578917 MEGF6O75095 1541 aa8.8□□□□□ -1
TRAF4-213ENST00000578917 IGSF1Q8N6C5 1336 aa8.8□□□□□ -1
TRAF4-213ENST00000578917 NPC1L1Q9UHC9 1359 aa8.79□□□□□ -1
TRAF4-213ENST00000578917 HSP90AB1P08238 724 aaKnown RBP8.79□□□□□ -1
TRAF4-213ENST00000578917 PHKG2P15735 406 aa8.79□□□□□ -1
TRAF4-213ENST00000578917 HMGB2P26583 209 aaKnown RBP8.79□□□□□ -1
TRAF4-213ENST00000578917 TMOD3Q9NYL9 352 aa8.79□□□□□ -1
TRAF4-213ENST00000578917 KIF20BQ96Q89 1820 aa8.79□□□□□ -1
TRAF4-213ENST00000578917 PARP4Q9UKK3 1724 aaKnown RBP8.79□□□□□ -1
TRAF4-213ENST00000578917 MSH5O43196 834 aa8.78□□□□□ -1
TRAF4-213ENST00000578917 PPP2R1AP30153 589 aa8.78□□□□□ -1
TRAF4-213ENST00000578917 KCNQ4P56696 695 aa8.78□□□□□ -1
TRAF4-213ENST00000578917 CABP4P57796 275 aa8.78□□□□□ -1
TRAF4-213ENST00000578917 SLC27A3Q5K4L6 730 aa8.78□□□□□ -1
TRAF4-213ENST00000578917 SMARCC1Q92922 1105 aaPredicted RBP8.78□□□□□ -1
TRAF4-213ENST00000578917 CCNL1Q9UK58 526 aaPredicted RBP8.78□□□□□ -1
TRAF4-213ENST00000578917 LRRC37A3O60309 1634 aa8.77□□□□□ -1.01
TRAF4-213ENST00000578917 U2AF1L5P0DN76 240 aaPredicted RBP8.77□□□□□ -1.01
TRAF4-213ENST00000578917 U2AF1Q01081 240 aaKnown RBP eCLIP8.77□□□□□ -1.01
TRAF4-213ENST00000578917 NKX1-1Q15270 411 aaPredicted RBP8.77□□□□□ -1.01
TRAF4-213ENST00000578917 SLC15A2Q16348 729 aa8.77□□□□□ -1.01
TRAF4-213ENST00000578917 DCAF5Q96JK2 942 aa8.77□□□□□ -1.01
TRAF4-213ENST00000578917 TFCP2L1Q9NZI6 479 aa8.77□□□□□ -1.01
TRAF4-213ENST00000578917 PPP1R1BQ9UD71 204 aaPredicted RBP8.77□□□□□ -1.01
TRAF4-213ENST00000578917 ERVV-2B6SEH9 535 aa8.76□□□□□ -1.01
TRAF4-213ENST00000578917 NEFMP07197 916 aa8.76□□□□□ -1.01
TRAF4-213ENST00000578917 PIGBQ92521 554 aa8.76□□□□□ -1.01
TRAF4-213ENST00000578917 SPON1Q9HCB6 807 aa8.76□□□□□ -1.01
TRAF4-213ENST00000578917 RGPD1P0DJD0 1748 aa8.76□□□□□ -1.01
TRAF4-213ENST00000578917 PEAK1Q9H792 1746 aa8.76□□□□□ -1.01
TRAF4-213ENST00000578917 NFATC2IPQ8NCF5 419 aa8.75□□□□□ -1.01
TRAF4-213ENST00000578917 RBM42Q9BTD8 480 aaKnown RBP8.75□□□□□ -1.01
TRAF4-213ENST00000578917 ANO8Q9HCE9 1232 aaPredicted RBP8.75□□□□□ -1.01
TRAF4-213ENST00000578917 LRRC4BQ9NT99 713 aa8.75□□□□□ -1.01
TRAF4-213ENST00000578917 KAT6BQ8WYB5 2073 aa8.75□□□□□ -1.01
TRAF4-213ENST00000578917 ZBTB7AO95365 584 aa8.74□□□□□ -1.01
TRAF4-213ENST00000578917 RALBP1Q15311 655 aa8.74□□□□□ -1.01
TRAF4-213ENST00000578917 AKAP4Q5JQC9 854 aa8.74□□□□□ -1.01
TRAF4-213ENST00000578917 ASAP1Q9ULH1 1129 aa8.74□□□□□ -1.01
TRAF4-213ENST00000578917 ATF5Q9Y2D1 282 aaPredicted RBP8.74□□□□□ -1.01
TRAF4-213ENST00000578917 FAM208AQ9UK61 1670 aaKnown RBP8.74□□□□□ -1.01
TRAF4-213ENST00000578917 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
TRAF4-213ENST00000578917 MAP2P11137 1827 aaKnown RBP8.73□□□□□ -1.01
TRAF4-213ENST00000578917 PTCD1O75127 700 aaKnown RBP8.73□□□□□ -1.01
TRAF4-213ENST00000578917 PRKAR2BP31323 418 aa8.73□□□□□ -1.01
TRAF4-213ENST00000578917 ATP6V1AP38606 617 aa8.73□□□□□ -1.01
TRAF4-213ENST00000578917 MTHFSDQ2M296 383 aaKnown RBP8.73□□□□□ -1.01
TRAF4-213ENST00000578917 LOC102724428A0A0B4J2F2 783 aa8.72□□□□□ -1.01
TRAF4-213ENST00000578917 GNAT3A8MTJ3 354 aa8.72□□□□□ -1.01
TRAF4-213ENST00000578917 FCHSD2O94868 740 aa8.72□□□□□ -1.01
TRAF4-213ENST00000578917 SIK1P57059 783 aa8.72□□□□□ -1.01
TRAF4-213ENST00000578917 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
TRAF4-213ENST00000578917 RTF1Q92541 710 aaKnown RBP8.72□□□□□ -1.01
TRAF4-213ENST00000578917 AK7Q96M32 723 aa8.72□□□□□ -1.01
TRAF4-213ENST00000578917 PDGFDQ9GZP0 370 aaPredicted RBP8.72□□□□□ -1.01
TRAF4-213ENST00000578917 PNNQ9H307 717 aaKnown RBP8.72□□□□□ -1.01
TRAF4-213ENST00000578917 LGR6Q9HBX8 967 aa8.72□□□□□ -1.01
TRAF4-213ENST00000578917 ATG3Q9NT62 314 aa8.72□□□□□ -1.01
TRAF4-213ENST00000578917 PLEKHG2Q9H7P9 1386 aa8.72□□□□□ -1.01
TRAF4-213ENST00000578917 NCAPD2Q15021 1401 aa8.71□□□□□ -1.01
TRAF4-213ENST00000578917 ZNF316A6NFI3 1004 aaPredicted RBP8.71□□□□□ -1.02
TRAF4-213ENST00000578917 DCAF8L1A6NGE4 600 aa8.71□□□□□ -1.02
TRAF4-213ENST00000578917 RNMTO43148 476 aaKnown RBP8.71□□□□□ -1.02
TRAF4-213ENST00000578917 TEFQ10587 303 aa8.71□□□□□ -1.02
TRAF4-213ENST00000578917 ZNF827Q17R98 1081 aa8.71□□□□□ -1.02
TRAF4-213ENST00000578917 FLAD1Q8NFF5 587 aa8.71□□□□□ -1.02
TRAF4-213ENST00000578917 AKT1S1Q96B36 256 aa8.71□□□□□ -1.02
TRAF4-213ENST00000578917 KDRP35968 1356 aa8.71□□□□□ -1.02
TRAF4-213ENST00000578917 PHF14O94880 888 aa8.7□□□□□ -1.02
TRAF4-213ENST00000578917 POLD1P28340 1107 aa8.7□□□□□ -1.02
TRAF4-213ENST00000578917 TTC5Q8N0Z6 440 aa8.7□□□□□ -1.02
TRAF4-213ENST00000578917 SLC16A10Q8TF71 515 aa8.7□□□□□ -1.02
TRAF4-213ENST00000578917 PHACTR3Q96KR7 559 aa8.7□□□□□ -1.02
TRAF4-213ENST00000578917 MTFR1LQ9H019 292 aa8.7□□□□□ -1.02
TRAF4-213ENST00000578917 SLC52A2Q9HAB3 445 aa8.7□□□□□ -1.02
TRAF4-213ENST00000578917 TNS1Q9HBL0 1735 aaKnown RBP8.7□□□□□ -1.02
TRAF4-213ENST00000578917 RGPD2P0DJD1 1756 aa8.7□□□□□ -1.02
TRAF4-213ENST00000578917 ANKRD26Q9UPS8 1709 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms