RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
CSNK1D-209ENST00000578904 THSD7AQ9UPZ6 1657 aa18.4■□□□□ 0.54
CSNK1D-209ENST00000578904 PARP4Q9UKK3 1724 aaKnown RBP18.4■□□□□ 0.54
CSNK1D-209ENST00000578904 MEGF6O75095 1541 aa18.39■□□□□ 0.54
CSNK1D-209ENST00000578904 FCHSD2O94868 740 aa18.39■□□□□ 0.53
CSNK1D-209ENST00000578904 HMOX1P09601 288 aa18.39■□□□□ 0.53
CSNK1D-209ENST00000578904 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.53
CSNK1D-209ENST00000578904 RUNDC1Q96C34 613 aa18.39■□□□□ 0.53
CSNK1D-209ENST00000578904 CDCA7Q9BWT1 371 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-209ENST00000578904 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
CSNK1D-209ENST00000578904 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
CSNK1D-209ENST00000578904 KDRP35968 1356 aa18.38■□□□□ 0.53
CSNK1D-209ENST00000578904 RGS12O14924 1447 aa18.38■□□□□ 0.53
CSNK1D-209ENST00000578904 LRRC37A3O60309 1634 aa18.38■□□□□ 0.53
CSNK1D-209ENST00000578904 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
CSNK1D-209ENST00000578904 OVOS2A0A0G2JMS6 1433 aa18.36■□□□□ 0.53
CSNK1D-209ENST00000578904 TNS2Q63HR2 1409 aa18.35■□□□□ 0.53
CSNK1D-209ENST00000578904 SEPT12Q8IYM1 358 aa18.35■□□□□ 0.53
CSNK1D-209ENST00000578904 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
CSNK1D-209ENST00000578904 PLEKHG2Q9H7P9 1386 aa18.33■□□□□ 0.53
CSNK1D-209ENST00000578904 PKD1L3Q7Z443 1732 aa18.33■□□□□ 0.52
CSNK1D-209ENST00000578904 DDB1Q16531 1140 aa18.33■□□□□ 0.52
CSNK1D-209ENST00000578904 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-209ENST00000578904 RSPH6AQ9H0K4 717 aa18.33■□□□□ 0.52
CSNK1D-209ENST00000578904 PRKAR2BP31323 418 aa18.32■□□□□ 0.52
CSNK1D-209ENST00000578904 CCDC146Q8IYE0 955 aa18.32■□□□□ 0.52
CSNK1D-209ENST00000578904 EXOC5O00471 708 aa18.31■□□□□ 0.52
CSNK1D-209ENST00000578904 PDE3BQ13370 1112 aa18.31■□□□□ 0.52
CSNK1D-209ENST00000578904 ZCRB1Q8TBF4 217 aaKnown RBP18.3■□□□□ 0.52
CSNK1D-209ENST00000578904 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
CSNK1D-209ENST00000578904 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
CSNK1D-209ENST00000578904 SHANK3Q9BYB0 1731 aa18.29■□□□□ 0.52
CSNK1D-209ENST00000578904 APAF1O14727 1248 aa18.29■□□□□ 0.52
CSNK1D-209ENST00000578904 PLEKHO1Q53GL0 409 aaPredicted RBP18.29■□□□□ 0.52
CSNK1D-209ENST00000578904 PCDH11XQ9BZA7 1347 aa18.28■□□□□ 0.52
CSNK1D-209ENST00000578904 PCDH11YQ9BZA8 1340 aa18.28■□□□□ 0.52
CSNK1D-209ENST00000578904 AMOTQ4VCS5 1084 aa18.28■□□□□ 0.52
CSNK1D-209ENST00000578904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.28■□□□□ 0.52
CSNK1D-209ENST00000578904 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.52
CSNK1D-209ENST00000578904 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
CSNK1D-209ENST00000578904 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-209ENST00000578904 DDX54Q8TDD1 881 aaKnown RBP18.26■□□□□ 0.51
CSNK1D-209ENST00000578904 LMOD3Q0VAK6 560 aa18.25■□□□□ 0.51
CSNK1D-209ENST00000578904 CCDC27Q2M243 656 aa18.25■□□□□ 0.51
CSNK1D-209ENST00000578904 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
CSNK1D-209ENST00000578904 C1orf141Q5JVX7 400 aa18.24■□□□□ 0.51
CSNK1D-209ENST00000578904 PHACTR3Q96KR7 559 aa18.24■□□□□ 0.51
CSNK1D-209ENST00000578904 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
CSNK1D-209ENST00000578904 TMPOP42166 694 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-209ENST00000578904 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-209ENST00000578904 MARCH10Q8NA82 808 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-209ENST00000578904 CYP27B1O15528 508 aa18.22■□□□□ 0.51
CSNK1D-209ENST00000578904 PHKG2P15735 406 aa18.22■□□□□ 0.51
CSNK1D-209ENST00000578904 NFE2L2Q16236 605 aa18.22■□□□□ 0.51
CSNK1D-209ENST00000578904 FAM182BQ5T319 152 aa18.22■□□□□ 0.51
CSNK1D-209ENST00000578904 IFNL2Q8IZJ0 200 aa18.22■□□□□ 0.51
CSNK1D-209ENST00000578904 DLG5Q8TDM6 1919 aa18.21■□□□□ 0.51
CSNK1D-209ENST00000578904 SRCAPQ6ZRS2 3230 aa18.21■□□□□ 0.51
CSNK1D-209ENST00000578904 CALD1Q05682 793 aaKnown RBP18.21■□□□□ 0.51
CSNK1D-209ENST00000578904 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
CSNK1D-209ENST00000578904 NEUROD2Q15784 382 aa18.21■□□□□ 0.51
CSNK1D-209ENST00000578904 MAP3K5Q99683 1374 aa18.2■□□□□ 0.5
CSNK1D-209ENST00000578904 RIPK4P57078 832 aa18.2■□□□□ 0.5
CSNK1D-209ENST00000578904 AKAP4Q5JQC9 854 aa18.2■□□□□ 0.5
CSNK1D-209ENST00000578904 WDR63Q8IWG1 891 aa18.2■□□□□ 0.5
CSNK1D-209ENST00000578904 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
CSNK1D-209ENST00000578904 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
CSNK1D-209ENST00000578904 WWC1Q8IX03 1113 aa18.18■□□□□ 0.5
CSNK1D-209ENST00000578904 BCL9O00512 1426 aa18.17■□□□□ 0.5
CSNK1D-209ENST00000578904 GNAT3A8MTJ3 354 aa18.17■□□□□ 0.5
CSNK1D-209ENST00000578904 FAM196AQ6ZSG2 479 aa18.17■□□□□ 0.5
CSNK1D-209ENST00000578904 RRP7AQ9Y3A4 280 aaKnown RBP18.17■□□□□ 0.5
CSNK1D-209ENST00000578904 KDM6AO15550 1401 aaPredicted RBP18.16■□□□□ 0.5
CSNK1D-209ENST00000578904 TOGARAM1Q9Y4F4 1720 aa18.16■□□□□ 0.5
CSNK1D-209ENST00000578904 E9PSI1 815 aa18.16■□□□□ 0.5
CSNK1D-209ENST00000578904 NKX1-1Q15270 411 aaPredicted RBP18.16■□□□□ 0.5
CSNK1D-209ENST00000578904 RTF1Q92541 710 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-209ENST00000578904 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
CSNK1D-209ENST00000578904 ZNF521Q96K83 1311 aa18.16■□□□□ 0.5
CSNK1D-209ENST00000578904 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
CSNK1D-209ENST00000578904 HTATSF1O43719 755 aaKnown RBP18.15■□□□□ 0.5
CSNK1D-209ENST00000578904 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
CSNK1D-209ENST00000578904 ACSBG1Q96GR2 724 aa18.15■□□□□ 0.5
CSNK1D-209ENST00000578904 NHSQ6T4R5 1651 aa18.14■□□□□ 0.49
CSNK1D-209ENST00000578904 IL16Q14005 1332 aa18.14■□□□□ 0.49
CSNK1D-209ENST00000578904 MYH16Q9H6N6 1097 aa18.13■□□□□ 0.49
CSNK1D-209ENST00000578904 ADAMTS7Q9UKP4 1686 aa18.12■□□□□ 0.49
CSNK1D-209ENST00000578904 SCN11AQ9UI33 1791 aa18.12■□□□□ 0.49
CSNK1D-209ENST00000578904 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
CSNK1D-209ENST00000578904 SYTL4Q96C24 671 aaPredicted RBP18.12■□□□□ 0.49
CSNK1D-209ENST00000578904 SBF2Q86WG5 1849 aa18.12■□□□□ 0.49
CSNK1D-209ENST00000578904 MRC1P22897 1456 aa18.11■□□□□ 0.49
CSNK1D-209ENST00000578904 VIRMAQ69YN4 1812 aaKnown RBP18.11■□□□□ 0.49
CSNK1D-209ENST00000578904 EP400Q96L91 3159 aa18.11■□□□□ 0.49
CSNK1D-209ENST00000578904 SLFN5Q08AF3 891 aa18.1■□□□□ 0.49
CSNK1D-209ENST00000578904 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
CSNK1D-209ENST00000578904 MCM10Q7L590 875 aa18.1■□□□□ 0.49
CSNK1D-209ENST00000578904 LGR6Q9HBX8 967 aa18.1■□□□□ 0.49
CSNK1D-209ENST00000578904 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
CSNK1D-209ENST00000578904 CEMIPQ8WUJ3 1361 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms