RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
SNX11-205ENST00000578861 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
SNX11-205ENST00000578861 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
SNX11-205ENST00000578861 A0A0G2JLW4 131 aa12.85□□□□□ -0.35
SNX11-205ENST00000578861 PHF14O94880 888 aa12.85□□□□□ -0.35
SNX11-205ENST00000578861 SRPK2P78362 688 aaKnown RBP12.85□□□□□ -0.35
SNX11-205ENST00000578861 AIDAQ96BJ3 306 aa12.85□□□□□ -0.35
SNX11-205ENST00000578861 CPSF1Q10570 1443 aaKnown RBP12.85□□□□□ -0.35
SNX11-205ENST00000578861 BTAF1O14981 1849 aa12.85□□□□□ -0.35
SNX11-205ENST00000578861 FCHSD2O94868 740 aa12.84□□□□□ -0.35
SNX11-205ENST00000578861 CTCFP49711 727 aaPredicted RBP12.84□□□□□ -0.35
SNX11-205ENST00000578861 KAT6BQ8WYB5 2073 aa12.84□□□□□ -0.35
SNX11-205ENST00000578861 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.35
SNX11-205ENST00000578861 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
SNX11-205ENST00000578861 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
SNX11-205ENST00000578861 LBX1P52954 281 aa12.82□□□□□ -0.36
SNX11-205ENST00000578861 RNF181Q9P0P0 153 aa12.82□□□□□ -0.36
SNX11-205ENST00000578861 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
SNX11-205ENST00000578861 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
SNX11-205ENST00000578861 QSER1Q2KHR3 1735 aa12.8□□□□□ -0.36
SNX11-205ENST00000578861 ABCC6O95255 1503 aa12.8□□□□□ -0.36
SNX11-205ENST00000578861 AK7Q96M32 723 aa12.8□□□□□ -0.36
SNX11-205ENST00000578861 USP47Q96K76 1375 aa12.8□□□□□ -0.36
SNX11-205ENST00000578861 PLEKHG2Q9H7P9 1386 aa12.8□□□□□ -0.36
SNX11-205ENST00000578861 WNK3Q9BYP7 1800 aa12.79□□□□□ -0.36
SNX11-205ENST00000578861 ERBB3P21860 1342 aa12.79□□□□□ -0.36
SNX11-205ENST00000578861 TUBGCP6Q96RT7 1819 aa12.78□□□□□ -0.36
SNX11-205ENST00000578861 TRPM1Q7Z4N2 1603 aa12.78□□□□□ -0.36
SNX11-205ENST00000578861 STAC3Q96MF2 364 aa12.78□□□□□ -0.36
SNX11-205ENST00000578861 SLIT3O75094 1523 aa12.78□□□□□ -0.36
SNX11-205ENST00000578861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
SNX11-205ENST00000578861 VEGFAP15692 232 aaPredicted RBP12.77□□□□□ -0.37
SNX11-205ENST00000578861 DPEP1P16444 411 aa12.77□□□□□ -0.37
SNX11-205ENST00000578861 TGFB2P61812 414 aa12.77□□□□□ -0.37
SNX11-205ENST00000578861 ANKRD24Q8TF21 1146 aa12.77□□□□□ -0.37
SNX11-205ENST00000578861 ANKRD36BQ8N2N9 1353 aa12.77□□□□□ -0.37
SNX11-205ENST00000578861 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
SNX11-205ENST00000578861 COL18A1P39060 1754 aa12.76□□□□□ -0.37
SNX11-205ENST00000578861 MMP10P09238 476 aa12.76□□□□□ -0.37
SNX11-205ENST00000578861 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
SNX11-205ENST00000578861 RGS19P49795 217 aa12.75□□□□□ -0.37
SNX11-205ENST00000578861 CICQ96RK0 1608 aaPredicted RBP12.74□□□□□ -0.37
SNX11-205ENST00000578861 PXDNLA1KZ92 1463 aa12.74□□□□□ -0.37
SNX11-205ENST00000578861 NSD2O96028 1365 aa12.74□□□□□ -0.37
SNX11-205ENST00000578861 HMGB2P26583 209 aaKnown RBP12.74□□□□□ -0.37
SNX11-205ENST00000578861 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
SNX11-205ENST00000578861 LTV1Q96GA3 475 aaPredicted RBP12.74□□□□□ -0.37
SNX11-205ENST00000578861 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
SNX11-205ENST00000578861 C10orf71Q711Q0 1435 aa12.73□□□□□ -0.37
SNX11-205ENST00000578861 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
SNX11-205ENST00000578861 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
SNX11-205ENST00000578861 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
SNX11-205ENST00000578861 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
SNX11-205ENST00000578861 VEGFBP49765 207 aa12.7□□□□□ -0.38
SNX11-205ENST00000578861 DALRD3Q5D0E6 543 aaKnown RBP12.7□□□□□ -0.38
SNX11-205ENST00000578861 WBP1LQ9NX94 342 aa12.7□□□□□ -0.38
SNX11-205ENST00000578861 PIM2Q9P1W9 311 aa12.7□□□□□ -0.38
SNX11-205ENST00000578861 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
SNX11-205ENST00000578861 CCDC87Q9NVE4 849 aa12.69□□□□□ -0.38
SNX11-205ENST00000578861 RGPD5Q99666 1765 aa12.69□□□□□ -0.38
SNX11-205ENST00000578861 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
SNX11-205ENST00000578861 CENPJQ9HC77 1338 aaPredicted RBP12.68□□□□□ -0.38
SNX11-205ENST00000578861 PIK3C2AO00443 1686 aa12.68□□□□□ -0.38
SNX11-205ENST00000578861 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
SNX11-205ENST00000578861 SSFA2P28290 1259 aa12.68□□□□□ -0.38
SNX11-205ENST00000578861 CNTNAP1P78357 1384 aa12.68□□□□□ -0.38
SNX11-205ENST00000578861 GNPATO15228 680 aa12.67□□□□□ -0.38
SNX11-205ENST00000578861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNX11-205ENST00000578861 DCAF5Q96JK2 942 aa12.67□□□□□ -0.38
SNX11-205ENST00000578861 KCNA3P22001 575 aa12.66□□□□□ -0.38
SNX11-205ENST00000578861 RASSF7Q02833 373 aa12.66□□□□□ -0.38
SNX11-205ENST00000578861 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
SNX11-205ENST00000578861 TMF1P82094 1093 aa12.65□□□□□ -0.38
SNX11-205ENST00000578861 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
SNX11-205ENST00000578861 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
SNX11-205ENST00000578861 TTC21AQ8NDW8 1320 aa12.64□□□□□ -0.39
SNX11-205ENST00000578861 NSD3Q9BZ95 1437 aa12.64□□□□□ -0.39
SNX11-205ENST00000578861 NLGN1Q8N2Q7 840 aa12.64□□□□□ -0.39
SNX11-205ENST00000578861 LY75O60449 1722 aa12.64□□□□□ -0.39
SNX11-205ENST00000578861 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
SNX11-205ENST00000578861 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
SNX11-205ENST00000578861 L3MBTL2Q969R5 705 aa12.63□□□□□ -0.39
SNX11-205ENST00000578861 LMNB1P20700 586 aa12.62□□□□□ -0.39
SNX11-205ENST00000578861 CHRNA5P30532 468 aa12.62□□□□□ -0.39
SNX11-205ENST00000578861 MAP2K1Q02750 393 aaPredicted RBP12.62□□□□□ -0.39
SNX11-205ENST00000578861 DPY19L2Q6NUT2 758 aa12.62□□□□□ -0.39
SNX11-205ENST00000578861 NFAT5O94916 1531 aa12.62□□□□□ -0.39
SNX11-205ENST00000578861 N4BP2Q86UW6 1770 aaPredicted RBP12.61□□□□□ -0.39
SNX11-205ENST00000578861 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
SNX11-205ENST00000578861 POTECB2RU33 542 aa12.61□□□□□ -0.39
SNX11-205ENST00000578861 POTEIP0CG38 1075 aa12.61□□□□□ -0.39
SNX11-205ENST00000578861 POTEJP0CG39 1038 aa12.61□□□□□ -0.39
SNX11-205ENST00000578861 NEUROD1Q13562 356 aa12.61□□□□□ -0.39
SNX11-205ENST00000578861 TRAPPC3LQ5T215 181 aa12.61□□□□□ -0.39
SNX11-205ENST00000578861 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
SNX11-205ENST00000578861 BEGAINQ9BUH8 593 aa12.61□□□□□ -0.39
SNX11-205ENST00000578861 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
SNX11-205ENST00000578861 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
SNX11-205ENST00000578861 DOT1LQ8TEK3 1739 aa12.6□□□□□ -0.39
SNX11-205ENST00000578861 TMEM88BA6NKF7 163 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms