RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 SLC15A2Q16348 729 aa31.62■■■□□ 2.65
CDKN2A-212ENST00000578845 STK32BQ9NY57 414 aa31.62■■■□□ 2.65
CDKN2A-212ENST00000578845 HSPA5P11021 654 aaKnown RBP31.61■■■□□ 2.65
CDKN2A-212ENST00000578845 EMILIN1Q9Y6C2 1016 aa31.59■■■□□ 2.65
CDKN2A-212ENST00000578845 USHBP1Q8N6Y0 703 aa31.58■■■□□ 2.65
CDKN2A-212ENST00000578845 DOT1LQ8TEK3 1739 aa31.58■■■□□ 2.65
CDKN2A-212ENST00000578845 NCAPD2Q15021 1401 aa31.58■■■□□ 2.65
CDKN2A-212ENST00000578845 RAPGEF4Q8WZA2 1011 aa31.57■■■□□ 2.64
CDKN2A-212ENST00000578845 PDGFDQ9GZP0 370 aaPredicted RBP31.57■■■□□ 2.64
CDKN2A-212ENST00000578845 NSD2O96028 1365 aa31.56■■■□□ 2.64
CDKN2A-212ENST00000578845 KAT6BQ8WYB5 2073 aa31.54■■■□□ 2.64
CDKN2A-212ENST00000578845 WASHC2AQ641Q2 1341 aa31.53■■■□□ 2.64
CDKN2A-212ENST00000578845 TATP17735 454 aaPredicted RBP31.53■■■□□ 2.64
CDKN2A-212ENST00000578845 PRIM1P49642 420 aaKnown RBP31.53■■■□□ 2.64
CDKN2A-212ENST00000578845 SLC27A3Q5K4L6 730 aa31.53■■■□□ 2.64
CDKN2A-212ENST00000578845 LRRC4BQ9NT99 713 aa31.53■■■□□ 2.64
CDKN2A-212ENST00000578845 POLR3GLQ9BT43 218 aa31.51■■■□□ 2.63
CDKN2A-212ENST00000578845 PPP1R1BQ9UD71 204 aaPredicted RBP31.51■■■□□ 2.63
CDKN2A-212ENST00000578845 PCDH11XQ9BZA7 1347 aa31.49■■■□□ 2.63
CDKN2A-212ENST00000578845 PCDH11YQ9BZA8 1340 aa31.49■■■□□ 2.63
CDKN2A-212ENST00000578845 ZBTB7AO95365 584 aa31.49■■■□□ 2.63
CDKN2A-212ENST00000578845 POLKQ9UBT6 870 aa31.49■■■□□ 2.63
CDKN2A-212ENST00000578845 MAP2P11137 1827 aaKnown RBP31.48■■■□□ 2.63
CDKN2A-212ENST00000578845 PTGER2P43116 358 aa31.48■■■□□ 2.63
CDKN2A-212ENST00000578845 SYTL4Q96C24 671 aaPredicted RBP31.48■■■□□ 2.63
CDKN2A-212ENST00000578845 LY75O60449 1722 aa31.48■■■□□ 2.63
CDKN2A-212ENST00000578845 PKD1L3Q7Z443 1732 aa31.47■■■□□ 2.63
CDKN2A-212ENST00000578845 ZNF827Q17R98 1081 aa31.47■■■□□ 2.63
CDKN2A-212ENST00000578845 MTFR1LQ9H019 292 aa31.46■■■□□ 2.63
CDKN2A-212ENST00000578845 PPM1GO15355 546 aaPredicted RBP31.45■■■□□ 2.63
CDKN2A-212ENST00000578845 AKT1S1Q96B36 256 aa31.45■■■□□ 2.63
CDKN2A-212ENST00000578845 PANK3Q9H999 370 aa31.45■■■□□ 2.63
CDKN2A-212ENST00000578845 QSER1Q2KHR3 1735 aa31.44■■■□□ 2.62
CDKN2A-212ENST00000578845 CYP27B1O15528 508 aa31.42■■■□□ 2.62
CDKN2A-212ENST00000578845 SGIP1Q9BQI5 828 aa31.42■■■□□ 2.62
CDKN2A-212ENST00000578845 ATF5Q9Y2D1 282 aaPredicted RBP31.41■■■□□ 2.62
CDKN2A-212ENST00000578845 EYA1Q99502 592 aa31.4■■■□□ 2.62
CDKN2A-212ENST00000578845 PLEKHG2Q9H7P9 1386 aa31.39■■■□□ 2.62
CDKN2A-212ENST00000578845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.37■■■□□ 2.61
CDKN2A-212ENST00000578845 TOGARAM1Q9Y4F4 1720 aa31.37■■■□□ 2.61
CDKN2A-212ENST00000578845 TNNT2P45379 298 aaPredicted RBP31.35■■■□□ 2.61
CDKN2A-212ENST00000578845 EIF4A2Q14240 407 aaKnown RBP31.35■■■□□ 2.61
CDKN2A-212ENST00000578845 NKX1-1Q15270 411 aaPredicted RBP31.35■■■□□ 2.61
CDKN2A-212ENST00000578845 CCNL1Q9UK58 526 aaPredicted RBP31.35■■■□□ 2.61
CDKN2A-212ENST00000578845 KCNQ4P56696 695 aa31.34■■■□□ 2.61
CDKN2A-212ENST00000578845 SPG7Q9UQ90 795 aa31.34■■■□□ 2.61
CDKN2A-212ENST00000578845 PNPLA7Q6ZV29 1317 aa31.33■■■□□ 2.61
CDKN2A-212ENST00000578845 SLC16A10Q8TF71 515 aa31.33■■■□□ 2.61
CDKN2A-212ENST00000578845 TUBGCP6Q96RT7 1819 aa31.33■■■□□ 2.61
CDKN2A-212ENST00000578845 COL24A1Q17RW2 1714 aa31.31■■■□□ 2.6
CDKN2A-212ENST00000578845 UTRNP46939 3433 aa31.31■■■□□ 2.6
CDKN2A-212ENST00000578845 IGSF1Q8N6C5 1336 aa31.3■■■□□ 2.6
CDKN2A-212ENST00000578845 TFCP2L1Q9NZI6 479 aa31.3■■■□□ 2.6
CDKN2A-212ENST00000578845 PALLDQ8WX93 1383 aa31.3■■■□□ 2.6
CDKN2A-212ENST00000578845 ITGB4P16144 1822 aa31.28■■■□□ 2.6
CDKN2A-212ENST00000578845 KIF7Q2M1P5 1343 aa31.28■■■□□ 2.6
CDKN2A-212ENST00000578845 MPRIPQ6WCQ1 1025 aa31.28■■■□□ 2.6
CDKN2A-212ENST00000578845 MAP3K5Q99683 1374 aa31.28■■■□□ 2.6
CDKN2A-212ENST00000578845 FHDC1Q9C0D6 1143 aaPredicted RBP31.27■■■□□ 2.6
CDKN2A-212ENST00000578845 KNSTRNQ9Y448 316 aa31.27■■■□□ 2.6
CDKN2A-212ENST00000578845 C5P01031 1676 aa31.26■■■□□ 2.6
CDKN2A-212ENST00000578845 HMGB2P26583 209 aaKnown RBP31.26■■■□□ 2.59
CDKN2A-212ENST00000578845 MORC1Q86VD1 984 aa31.26■■■□□ 2.59
CDKN2A-212ENST00000578845 ARXQ96QS3 562 aa31.26■■■□□ 2.59
CDKN2A-212ENST00000578845 SYT17Q9BSW7 474 aa31.26■■■□□ 2.59
CDKN2A-212ENST00000578845 DCAF8L1A6NGE4 600 aa31.24■■■□□ 2.59
CDKN2A-212ENST00000578845 PHKG2P15735 406 aa31.24■■■□□ 2.59
CDKN2A-212ENST00000578845 IFNL2Q8IZJ0 200 aa31.24■■■□□ 2.59
CDKN2A-212ENST00000578845 SMARCC1Q92922 1105 aaPredicted RBP31.24■■■□□ 2.59
CDKN2A-212ENST00000578845 AMER1Q5JTC6 1135 aaPredicted RBP31.23■■■□□ 2.59
CDKN2A-212ENST00000578845 PIGBQ92521 554 aa31.23■■■□□ 2.59
CDKN2A-212ENST00000578845 TAF1LQ8IZX4 1826 aa31.21■■■□□ 2.59
CDKN2A-212ENST00000578845 POLD1P28340 1107 aa31.17■■■□□ 2.58
CDKN2A-212ENST00000578845 COL23A1Q86Y22 540 aaPredicted RBP31.16■■■□□ 2.58
CDKN2A-212ENST00000578845 TMOD3Q9NYL9 352 aa31.16■■■□□ 2.58
CDKN2A-212ENST00000578845 C4BP0C0L5 1744 aa31.15■■■□□ 2.58
CDKN2A-212ENST00000578845 PER1O15534 1290 aaPredicted RBP31.14■■■□□ 2.58
CDKN2A-212ENST00000578845 KDRP35968 1356 aa31.14■■■□□ 2.58
CDKN2A-212ENST00000578845 YY1P25490 414 aa31.13■■■□□ 2.57
CDKN2A-212ENST00000578845 FLAD1Q8NFF5 587 aa31.13■■■□□ 2.57
CDKN2A-212ENST00000578845 AMOTQ4VCS5 1084 aa31.12■■■□□ 2.57
CDKN2A-212ENST00000578845 LOC102724428A0A0B4J2F2 783 aa31.11■■■□□ 2.57
CDKN2A-212ENST00000578845 HSP90AB1P08238 724 aaKnown RBP31.11■■■□□ 2.57
CDKN2A-212ENST00000578845 IL13P35225 146 aa31.11■■■□□ 2.57
CDKN2A-212ENST00000578845 SIK1P57059 783 aa31.11■■■□□ 2.57
CDKN2A-212ENST00000578845 PLEKHO1Q53GL0 409 aaPredicted RBP31.11■■■□□ 2.57
CDKN2A-212ENST00000578845 GOLGB1Q14789 3259 aaKnown RBP31.11■■■□□ 2.57
CDKN2A-212ENST00000578845 ERVV-2B6SEH9 535 aa31.1■■■□□ 2.57
CDKN2A-212ENST00000578845 AEBP1Q8IUX7 1158 aa31.1■■■□□ 2.57
CDKN2A-212ENST00000578845 DCAF5Q96JK2 942 aa31.09■■■□□ 2.57
CDKN2A-212ENST00000578845 ASAP1Q9ULH1 1129 aa31.09■■■□□ 2.57
CDKN2A-212ENST00000578845 KDM6AO15550 1401 aaPredicted RBP31.07■■■□□ 2.57
CDKN2A-212ENST00000578845 AK7Q96M32 723 aa31.07■■■□□ 2.56
CDKN2A-212ENST00000578845 ATG3Q9NT62 314 aa31.07■■■□□ 2.56
CDKN2A-212ENST00000578845 UBR3Q6ZT12 1888 aa31.07■■■□□ 2.56
CDKN2A-212ENST00000578845 NPC1L1Q9UHC9 1359 aa31.06■■■□□ 2.56
CDKN2A-212ENST00000578845 MSH5O43196 834 aa31.06■■■□□ 2.56
CDKN2A-212ENST00000578845 ZNF530Q6P9A1 599 aaPredicted RBP31.06■■■□□ 2.56
CDKN2A-212ENST00000578845 SULT6B1Q6IMI4 303 aa31.05■■■□□ 2.56
CDKN2A-212ENST00000578845 LINC00116Q8NCU8 138 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms