RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 TPD52L2O43399 206 aaKnown RBP5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 ICMTO60725 284 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 ZPR1O75312 459 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 COPS2P61201 443 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 USP17L24Q0WX57 530 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 PTPROQ16827 1216 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 USP17L2Q6R6M4 530 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 USP17L1Q7RTZ2 530 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 SYMPKQ92797 1274 aaKnown RBP5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 KCNB2Q92953 911 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 SPACA7Q96KW9 195 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 GMLQ99445 158 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 DNAJC2Q99543 621 aaKnown RBP5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 PRDM16Q9HAZ2 1276 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 IL21Q9HBE4 155 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 MAGEC2Q9UBF1 373 aaPredicted RBP5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 TBX22Q9Y458 520 aa5.97□□□□□ -1.45
GAPLINC-201ENST00000578664 CFAP99D6REC4 459 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 FMNL1O95466 1100 aaPredicted RBP5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 IBSPP21815 317 aaPredicted RBP5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 ITGAEP38570 1179 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 LDLRAD1Q5T700 205 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 GORABQ5T7V8 394 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 TAS1R3Q7RTX0 852 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 RETREG3Q86VR2 466 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 LRRN4Q8WUT4 740 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 ZNF516Q92618 1163 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 TINF2Q9BSI4 451 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 TGIF2Q9GZN2 237 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 SLC52A1Q9NWF4 448 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 MKRN1Q9UHC7 482 aaKnown RBP5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 DCTN4Q9UJW0 460 aa5.96□□□□□ -1.46
GAPLINC-201ENST00000578664 ATP5J2-PTCD1G3V325 749 aa5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 C6orf229H3BNL8 230 aa5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 MAPK1P28482 360 aa5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 MCCD1P59942 119 aaPredicted RBP5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 MSS51Q4VC12 460 aa5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 CRTC2Q53ET0 693 aaPredicted RBP5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 C9orf131Q5VYM1 1079 aa5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 DESI1Q6ICB0 168 aa5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 METTL16Q86W50 562 aaKnown RBP5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 EXOC8Q8IYI6 725 aa5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 FAM160A2Q8N612 972 aaPredicted RBP5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 GPATCH3Q96I76 525 aa5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 USB1Q9BQ65 265 aaKnown RBP5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 METTL5Q9NRN9 209 aaKnown RBP5.95□□□□□ -1.46
GAPLINC-201ENST00000578664 hCG_2014768A0A024R1R8 64 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 USP17L5A8MUK1 530 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 ADH1BP00325 375 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 RASA1P20936 1047 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 FGD1P98174 961 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 NR1H3Q13133 447 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 NT5DC4Q86YG4 428 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 ANKMY2Q8IV38 441 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 ZCRB1Q8TBF4 217 aaKnown RBP5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 EPS8L1Q8TE68 723 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 ZNF526Q8TF50 670 aaPredicted RBP5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 SPSB2Q99619 263 aa5.94□□□□□ -1.46
GAPLINC-201ENST00000578664 TLL1O43897 1013 aa5.93□□□□□ -1.46
GAPLINC-201ENST00000578664 SKIP12755 728 aa5.93□□□□□ -1.46
GAPLINC-201ENST00000578664 GTF2F1P35269 517 aaKnown RBP eCLIP5.93□□□□□ -1.46
GAPLINC-201ENST00000578664 MMP16P51512 607 aa5.93□□□□□ -1.46
GAPLINC-201ENST00000578664 GNL2Q13823 731 aaKnown RBP5.93□□□□□ -1.46
GAPLINC-201ENST00000578664 ECM1Q16610 540 aa5.93□□□□□ -1.46
GAPLINC-201ENST00000578664 RGL4Q8IZJ4 473 aa5.93□□□□□ -1.46
GAPLINC-201ENST00000578664 DHX38Q92620 1227 aaKnown RBP5.93□□□□□ -1.46
GAPLINC-201ENST00000578664 NOP58Q9Y2X3 529 aaKnown RBP5.93□□□□□ -1.46
GAPLINC-201ENST00000578664 PIK3CDO00329 1044 aa5.92□□□□□ -1.46
GAPLINC-201ENST00000578664 C21orf2O43822 256 aa5.92□□□□□ -1.46
GAPLINC-201ENST00000578664 DXOO77932 396 aaKnown RBP5.92□□□□□ -1.46
GAPLINC-201ENST00000578664 ANAPC15P60006 121 aa5.92□□□□□ -1.46
GAPLINC-201ENST00000578664 KCNC4Q03721 635 aa5.92□□□□□ -1.46
GAPLINC-201ENST00000578664 IFFO2Q5TF58 517 aa5.92□□□□□ -1.46
GAPLINC-201ENST00000578664 GLYCTKQ8IVS8 523 aa5.92□□□□□ -1.46
GAPLINC-201ENST00000578664 NKX2-3Q8TAU0 364 aa5.92□□□□□ -1.46
GAPLINC-201ENST00000578664 H3BRB1 525 aa5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 ABL1P00519 1130 aa5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 JUNDP17535 347 aa5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 HSD3B2P26439 372 aa5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 FKBP4Q02790 459 aaKnown RBP eCLIP5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 SF3B2Q13435 895 aaKnown RBP5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 ZNF746Q6NUN9 644 aaPredicted RBP5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 LYPD8Q6UX82 237 aa5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 TMEM87AQ8NBN3 555 aa5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 TUT1Q9H6E5 874 aaKnown RBP5.91□□□□□ -1.46
GAPLINC-201ENST00000578664 PSME1Q06323 249 aa5.9□□□□□ -1.46
GAPLINC-201ENST00000578664 NR6A1Q15406 480 aa5.9□□□□□ -1.46
GAPLINC-201ENST00000578664 SMC5Q8IY18 1101 aa5.9□□□□□ -1.46
GAPLINC-201ENST00000578664 NLGN1Q8N2Q7 840 aa5.9□□□□□ -1.46
GAPLINC-201ENST00000578664 RNF34Q969K3 372 aa5.9□□□□□ -1.46
GAPLINC-201ENST00000578664 CAPN10Q9HC96 672 aa5.9□□□□□ -1.46
GAPLINC-201ENST00000578664 PRDM9Q9NQV7 894 aa5.9□□□□□ -1.46
GAPLINC-201ENST00000578664 PER1O15534 1290 aaPredicted RBP5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 PARNO95453 639 aaKnown RBP5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 SCNN1AP37088 669 aa5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 ARHGAP4P98171 946 aa5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 DPYDQ12882 1025 aa5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 TCEAL1Q15170 157 aa5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 RNF187Q5TA31 235 aaPredicted RBP5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 MORC4Q8TE76 937 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms