RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
PPP4R1-210ENST00000578557 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
PPP4R1-210ENST00000578557 RAPGEF4Q8WZA2 1011 aa11.64□□□□□ -0.55
PPP4R1-210ENST00000578557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.554e-6■■■■□ 19.9
PPP4R1-210ENST00000578557 MARF1Q9Y4F3 1742 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-210ENST00000578557 POLKQ9UBT6 870 aa11.63□□□□□ -0.55
PPP4R1-210ENST00000578557 AKAP12Q02952 1782 aa11.63□□□□□ -0.55
PPP4R1-210ENST00000578557 PARD3Q8TEW0 1356 aa11.63□□□□□ -0.55
PPP4R1-210ENST00000578557 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
PPP4R1-210ENST00000578557 PIK3C2AO00443 1686 aa11.62□□□□□ -0.55
PPP4R1-210ENST00000578557 PHRF1Q9P1Y6 1649 aaKnown RBP11.62□□□□□ -0.55
PPP4R1-210ENST00000578557 RRS1Q15050 365 aaKnown RBP11.62□□□□□ -0.55
PPP4R1-210ENST00000578557 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
PPP4R1-210ENST00000578557 OVOS2A0A0G2JMS6 1433 aa11.61□□□□□ -0.55
PPP4R1-210ENST00000578557 PLSCR1O15162 318 aa11.61□□□□□ -0.55
PPP4R1-210ENST00000578557 TATP17735 454 aaPredicted RBP11.61□□□□□ -0.55
PPP4R1-210ENST00000578557 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
PPP4R1-210ENST00000578557 GLI3P10071 1580 aa11.61□□□□□ -0.55
PPP4R1-210ENST00000578557 LMO7Q8WWI1 1683 aa11.61□□□□□ -0.55
PPP4R1-210ENST00000578557 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
PPP4R1-210ENST00000578557 ZCRB1Q8TBF4 217 aaKnown RBP11.6□□□□□ -0.55
PPP4R1-210ENST00000578557 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
PPP4R1-210ENST00000578557 CRYBG1Q9Y4K1 1723 aa11.6□□□□□ -0.55
PPP4R1-210ENST00000578557 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
PPP4R1-210ENST00000578557 AMOTQ4VCS5 1084 aa11.59□□□□□ -0.55
PPP4R1-210ENST00000578557 ABCA3Q99758 1704 aa11.59□□□□□ -0.55
PPP4R1-210ENST00000578557 NBPF6Q5VWK0 638 aa11.58□□□□□ -0.56
PPP4R1-210ENST00000578557 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
PPP4R1-210ENST00000578557 NBPF4Q96M43 638 aa11.58□□□□□ -0.56
PPP4R1-210ENST00000578557 CFAP53Q96M91 514 aa11.58□□□□□ -0.56
PPP4R1-210ENST00000578557 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
PPP4R1-210ENST00000578557 PLCH1Q4KWH8 1693 aa11.58□□□□□ -0.56
PPP4R1-210ENST00000578557 DISP2A7MBM2 1401 aa11.57□□□□□ -0.56
PPP4R1-210ENST00000578557 APBA3O96018 575 aa11.56□□□□□ -0.56
PPP4R1-210ENST00000578557 HSP90AB1P08238 724 aaKnown RBP11.56□□□□□ -0.56
PPP4R1-210ENST00000578557 NBPF14Q5TI25 921 aa11.56□□□□□ -0.56
PPP4R1-210ENST00000578557 MARCH10Q8NA82 808 aaPredicted RBP11.56□□□□□ -0.56
PPP4R1-210ENST00000578557 NUDCQ9Y266 331 aa11.56□□□□□ -0.56
PPP4R1-210ENST00000578557 NRAPQ86VF7 1730 aa11.55□□□□□ -0.56
PPP4R1-210ENST00000578557 HAX1O00165 279 aa11.55□□□□□ -0.56
PPP4R1-210ENST00000578557 RALBP1Q15311 655 aa11.55□□□□□ -0.56
PPP4R1-210ENST00000578557 PLEKHO1Q53GL0 409 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-210ENST00000578557 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
PPP4R1-210ENST00000578557 PNNQ9H307 717 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-210ENST00000578557 PCDH11XQ9BZA7 1347 aa11.55□□□□□ -0.56
PPP4R1-210ENST00000578557 PCDH11YQ9BZA8 1340 aa11.55□□□□□ -0.56
PPP4R1-210ENST00000578557 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
PPP4R1-210ENST00000578557 TRIM37O94972 964 aa11.54□□□□□ -0.56
PPP4R1-210ENST00000578557 FBLN1P23142 703 aa11.54□□□□□ -0.56
PPP4R1-210ENST00000578557 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-210ENST00000578557 MTHFSP49914 203 aa11.54□□□□□ -0.56
PPP4R1-210ENST00000578557 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
PPP4R1-210ENST00000578557 NKX1-1Q15270 411 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-210ENST00000578557 EYA1Q99502 592 aa11.54□□□□□ -0.56
PPP4R1-210ENST00000578557 COL18A1P39060 1754 aa11.54□□□□□ -0.56
PPP4R1-210ENST00000578557 TNS2Q63HR2 1409 aa11.53□□□□□ -0.56
PPP4R1-210ENST00000578557 THSD7AQ9UPZ6 1657 aa11.53□□□□□ -0.56
PPP4R1-210ENST00000578557 DIAPH1O60610 1272 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-210ENST00000578557 NUBP1P53384 320 aa11.53□□□□□ -0.56
PPP4R1-210ENST00000578557 IFNL2Q8IZJ0 200 aa11.53□□□□□ -0.56
PPP4R1-210ENST00000578557 CAMKK2Q96RR4 588 aa11.53□□□□□ -0.56
PPP4R1-210ENST00000578557 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
PPP4R1-210ENST00000578557 IL13P35225 146 aa11.52□□□□□ -0.57
PPP4R1-210ENST00000578557 CC2D1BQ5T0F9 858 aaKnown RBP11.52□□□□□ -0.57
PPP4R1-210ENST00000578557 DDX54Q8TDD1 881 aaKnown RBP11.52□□□□□ -0.57
PPP4R1-210ENST00000578557 NCAPD2Q15021 1401 aa11.52□□□□□ -0.57
PPP4R1-210ENST00000578557 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-210ENST00000578557 SLC27A3Q5K4L6 730 aa11.51□□□□□ -0.57
PPP4R1-210ENST00000578557 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
PPP4R1-210ENST00000578557 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
PPP4R1-210ENST00000578557 ERVV-2B6SEH9 535 aa11.49□□□□□ -0.57
PPP4R1-210ENST00000578557 NEFMP07197 916 aa11.49□□□□□ -0.57
PPP4R1-210ENST00000578557 RASEFQ8IZ41 740 aa11.49□□□□□ -0.57
PPP4R1-210ENST00000578557 MYOM1P52179 1685 aa11.49□□□□□ -0.57
PPP4R1-210ENST00000578557 FCHSD2O94868 740 aa11.48□□□□□ -0.57
PPP4R1-210ENST00000578557 EN1Q05925 392 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-210ENST00000578557 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
PPP4R1-210ENST00000578557 FAM182BQ5T319 152 aa11.48□□□□□ -0.57
PPP4R1-210ENST00000578557 DEFB132Q7Z7B7 95 aa11.48□□□□□ -0.57
PPP4R1-210ENST00000578557 KDRP35968 1356 aa11.48□□□□□ -0.57
PPP4R1-210ENST00000578557 SULT6B1Q6IMI4 303 aa11.47□□□□□ -0.57
PPP4R1-210ENST00000578557 PARP4Q9UKK3 1724 aaKnown RBP11.46□□□□□ -0.57
PPP4R1-210ENST00000578557 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
PPP4R1-210ENST00000578557 PHKG2P15735 406 aa11.46□□□□□ -0.57
PPP4R1-210ENST00000578557 PPP2R1AP30153 589 aa11.46□□□□□ -0.57
PPP4R1-210ENST00000578557 EZH2Q15910 746 aaKnown RBP11.46□□□□□ -0.57
PPP4R1-210ENST00000578557 AKAP4Q5JQC9 854 aa11.46□□□□□ -0.57
PPP4R1-210ENST00000578557 GAS2L2Q8NHY3 880 aa11.46□□□□□ -0.57
PPP4R1-210ENST00000578557 FAM212AQ96EL1 285 aa11.46□□□□□ -0.57
PPP4R1-210ENST00000578557 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-210ENST00000578557 CYP27B1O15528 508 aa11.45□□□□□ -0.58
PPP4R1-210ENST00000578557 PRIM1P49642 420 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-210ENST00000578557 DDX10Q13206 875 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-210ENST00000578557 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
PPP4R1-210ENST00000578557 USHBP1Q8N6Y0 703 aa11.45□□□□□ -0.58
PPP4R1-210ENST00000578557 HTATSF1O43719 755 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-210ENST00000578557 FLAD1Q8NFF5 587 aa11.44□□□□□ -0.58
PPP4R1-210ENST00000578557 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-210ENST00000578557 SYTL4Q96C24 671 aaPredicted RBP11.43□□□□□ -0.58
PPP4R1-210ENST00000578557 STK32BQ9NY57 414 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms